XLOC_008273 (gene) - C. hemisphaerica

Overview
NameXLOC_008273
Unique NameXLOC_008273
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000198:349790..353221+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008273 ID=XLOC_008273|Name=XLOC_008273|organism=Clytia hemisphaerica|type=gene|length=3432bp|location=Sequence derived from alignment at sc0000198:349790..353221+ (Clytia hemisphaerica)
ATCGTCTGCGATATTCTTCACTAGGTAGATGAGACACTTTTGAGACAAAT
TCAGCTGTAGTGTTTACACAGGTCCTACTTAATAAATTTCAAACTCTTAA
TTTcagcaaatttgaaaaaaatggtgaaatatGATGGATTGTAAATTTCT
TATTCCTGTCAAATTTTAGGTCAAATTATAAACACTGTTACAGTATTGGA
ATTGTGCCATTAAGAAGAGGAGATTCAAAAATGGCTCAAGTTCTACGCAA
AATTGCCAGGTGAGATATAATTATATATATGATTTTACAGACGTCCAACG
GATGGGAAGAATTAGCTCcgatttttgtgaattttttctGCCACTTTGGG
AAGATTCGGAAAAAGTCGAAAGTCAAAAAACGACTCAAATCAAACTCGTG
CGAAGCTCTTTGATGATAAGCAAAAATTACCCCTGCTGGGTATGAAGCGG
TAAATTCTCATCTACAATCAGTAAAAAATATGTGCCGATTTCTTGAAAAT
CCCCCCTAATATCAGTACAGTGTTGATgtgagcttattctgagcatGGTG
GCAGCCTTTCCACCCATCAACATTGATACTAGGGGGGGGAGGAATTCTTG
CCACAATATTTGGTCACAGCTTGTATAAATAATTGTTCGTGAGGGCTGAT
AGCAGTGATTATCATTTCCAGTTGAGTCCTGGGAGCTCGTCTTGTTTTCC
AATCTCTGGAAATACGAGAAGGGAATTTTAATCATAAATGCTCAAATTTC
TAtataatgaaaatatatatgcggtgatcaaaaaaataatccgaaatctg
GTCACGTACGGAAAGAGGGATTTATTAGGActtttatttgaatttaaaaa
aattttaaccaaaaatactatttgtttctaaaattttctgatGAGCTCTA
AGTAAGTTTCGTTAGCAGACCAGAATTTGTGTTTTTATATTGAAACTCTA
GCCTTTATCGAAGATCACAATCAAAGctattatttaaaaacatttttaaa
attagaCTTGGTTCTAAATCATTTAATGATTTTCGGCTATTACATAGACA
GAATATCTTTGTGATACACAGGTTCGGGTCGTtattagtctacacaatag
acagttccaggcttttaggccttactcttggtctataggcactgctatag
gtgGGCACTAGTAACCTCCACCGGAAATTGTTTATTAATAGGTTTTAACA
TAAATaaacaactttcacaaaagatgtttatcaatagagatttcaaataa
aagaatgtttaaaacacagctgattggcttaggtttcgaaattCTCTATT
gcttcattaaaacctcagtgcgcatgcgatttatccggagaatttcaCTA
TTCacaacaagagcagtgctcatatcccgaagggaaggagttttacgctc
gaaacgaaagAAAGACATAACGCCTAGGTCGTTATGCAACCGCTGTCAAA
TGGTCTCTCTGCGAATCAAGGAGTCAATTGGGAATTTTTATTAGCGGTTT
ATGTGAAAAATTTAACGTCGTGAagttttccttctttttttttctagcaT
GAAGCTAACGAACAAAGCCGTCCAATCGGGCCGTGCAAAAGAACACGAAA
CATGGAAAAACACGTTGATCAATAAGGAACGTGATAAACTTCTACAAGAA
TTTCTATTGGCTCGTGAGGAATTAAAAACTCAGTTCGATTGTGAGAAACG
AGAGCTTGTCGGTAATTACGAGCGACGTTTACGTTATTTACGACGACTTT
TAGAAGACTGCGATGAAAATATTAACATGTTGAAGCTAAATCTTGATGca
gaaaaggaagaaaatttcattttgaaaacgaaaatcaTGGAACTTGAGCG
TGAAAGAATTCAAAAAGATGTTGATGAAAACCTACCGAAATTTTCAAGTC
ACAAAGCAGGTTATTTGAATCAAAGCTACGATAAAGATTCTGTTACGACA
TCCTTCCCTTGTAGTCGTAATACTTCAACGCGTAAATCCTCATACCAAAG
CTACGTTTCAACACCACAGAGATCTTCAATCGACGGTTTAAAATATAGTG
ATCGTTTCGCCAGCTGTGGATCCCTTGGTACTAAAGACAGTTGCTTCACA
AGTGTTTCCACACTCTCGACGGTCCCGTCATTCGACGAGGTACAGGATGA
CGTGCACGCTAATTGCCGTAAAGAATTTAATCGTTTGTTAAAGGAATTAA
GAGATAAACAAGACAAATATGATTCACAGTTGGAAATTGAGAAAGAACGA
ATGAACGAACAAATACAAAATGAGAAACTCCAATTAGAACGAATCGTCTA
CCGGCAACTTAACGTGCGCCTAGATcgagaaataaaaaagcaagAACTCC
TTTTAACAGAAAATACACATTTGAGACGTACCATTTCGAACGCTATTATG
GAAAGAATGCAATGTGAATGTCGACAACAAAAGAGTTCGAAAAGCGGCCA
TCATTGGAAGGAATCGAATTCTGATAGTGGTGCCGATGTCGGGGATAATC
AATCCGATGAAGGTTCAGATGGTTCCGATTCGGGAAAAGGTAGCTTAACA
CGGGAAAACTATTTTACAGACTCATGCGAAGATCTTATAAAAATGGGATT
GATAGACAAAGTAGTTGAAAGCTCTGATaatgtttttcttgtttctCCTT
CAAAAGATAATGCTAACGGATTCTTAGGTGAAAATCGGAATTTTAAAGAA
GAACATGATTTCAATGAAGAGTGCTTAGAAGAGGTAGCGCTCTTTAAAGA
GGATTTGAGACGCAAATTATTCGAATTGGAAGCTCTTTTGAATAATGACA
AAGGAGAATGCTAATGATATTGAACCTGATGAAAAAACGTTTGTTTTAAA
TTCGAAGTTTGGTTGGCAAATGGTTTGTCTTGGCAGAAATTTCTTAAATC
GATCTATAAGCAATAAAATATTTATGTACGATATTTTGGaacatttattt
acttttcacaTTATTGTTTCTTTGACTAATTTGTATGTAACTATGTAAAA
TACGGTGTTTTTTATCACCTTATCTGTAATTCTGATGATTAAGAAAGCAT
AAAGATTTATTCTTCATCATCAACGAGATCACAGGTGGTGTGGTGGCGTG
ATGgcatgaatttttgaaaaataagtgaTTGATAGGTAATGTTTGCTCTT
AATTTTTAATTCTCTCTATAGTGACTAGACTGACACatatgcgcgataaa
atttctaaactTGGTCGTCAGGGgctgatattttctttgaaaactcggcC
TCTCTGATAGTGATAACTCAGGGTAGGTAAGTGTAGCCCAATAACAGTTT
gttaattgaaaattttctctgtCTTCTCTTATCCGCCTACTCGATCGGTA
ACATTTGGTAAATCTTGCACTCGTAGGAATAGGGTCCTAAGGATATGGCG
TTGAAGTCAgcggcgttgtggcaggggagGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014781TCONS_00014781Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014781-proteinTCONS_00014781-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:349790..353221 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.6	1.39	0.6	0.45	2.3	2.29	22.13	21.23	8.25	8.38	8.93	8.73	4.76	4.24	3.03	4.31	2.33	3.32	1.56	1.77	2.55	2.54	3.57	4.13	3.52	4.06	1.86	1.34	2.46	2.09