TCONS_00014761 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014761
Unique NameTCONS_00014761
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2647

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014761 ID=TCONS_00014761|Name=TCONS_00014761|organism=Clytia hemisphaerica|type=transcript|length=2647bp
TAATAACATCGTTTTGGAATAATTCCAATTTGATCAATCCATGATTACCT
GAAGACAATTCATTGGTTGGTACTCATAACCTAACCACAATTCATGATTT
CGTTGTTGCTTAGATAATCAGAAAGACTTTTGATGGATGCTTTTTACTTT
GGTTAGTAGGCAGTTCCTTTCTCTTTCAGCCTTTTGATGGCAAACAATTG
TGGTATGGAGTCTATGAGACGGGATACAGTTTTGTTCAGCCTATTATGCG
TACATattattatgaaattgtttctttCGTTTTTGGTTTTTATGAGTTTT
GGATGAGGGCActtttaaagtgaattttttggatttgaagttCAAGCTAT
ATTAGACAAGGGGTCATCAGTATATTACGCACGCATTGAAGTGGGGAGAG
TGGACTTAGCAAAACCgtacttattttttgaattatgtCCTAATTGTTCT
CTATGATGCACACACGAGGAAGAGTGTACGAACTAAGGATGACCCTCAAG
CAGAACATGTTTCTTTGCATTCGTTTTTATAGAAACGAAAAATTTTGTCG
AAACTATCAACAAGGTCTTACAAGTTTCTGTCGCACGATAATAACATTTc
atcagtcagtcagtcagtcactcactcactcacgaCCAGTGCTGTTGTTT
GCTTACTCAGCATTAAGATTCTTCTGGTTATTGTTAgcctttgaaaataa
tttaaaatatgcGTTACTCCTCTCTCGTTGTGCCAGTTTAAAGTTGTAGA
ATTGTATGGGAATCCAGATCATTAAAACTTTAAGTGGTTAAAGGCAAATC
AAAAGAACTTGTTGTCTCCCAGAGTTTCTAATGTTTCAAACGTCTAATTG
CATAACATCTTTTTATCACGATCTAAAAGTTCTGCGGCTTTCCACTCCAA
AAATGAGCTTAACAGTTTTCTATTTTCTGTGGTCAGAGAGTCTGTTAGTA
GGACTAGAAGATACATAATAGGAGaacatagtttttgaaattgtctgTGT
GAAATTATTAGTTCGTGGCTTAAATATTCCAAATTACCATTGGTCCATTA
GAATATAGTTTTATCtcgtcaagaaaaaaaaattatttacatttaaaaat
ttagaattataaaaaatatttaaaatgccTTTCAAACCTGTCGCAGCACC
AAAATGTGGACGTTGTGGAAAATCCGTCTACCCTGCAGAACAAAGGCTAG
CGGCAAACTGTTCATGGCATTTTGGAGGCTGTTTCACTTGTAAAATTTGT
AATAAAACTCTCTCTTCTACAACTCTGGCTGAACACAAAGAAAGCAAGGA
GATTTATTGCAAATCGTGTTACGGCAAACATTTCGGTCCAAAAGGTTACG
GATACGGTGCCGGAGCTGGAACACTCAGTATGGACGCTGGAGCTAATGGA
TGGACAAAGAACAACGCGCCTTTGAACGAGAATTTGAGCTCACATAAATA
TCTGGGCGGTAATGAATGTGGGCGTTGTGGAGGCTCTGTCTACAGCGCGG
AAGAAATTCTGGGTGCAGGACTTtcgtGGCATAAAGGTTGTTTCACATGT
AAAGATTGCAACAAACGGTTAGATTCAAAAACAGTATCTGAAAATATCGA
CGAACAAGATATATATTGCAAAGCTTGTTATGGCAAGCATTTTGCACCTA
AAGGCTATGGTTATGGCTCAGGGGCTGGAGCTCTCAAAAATACTGGTATG
ACGCCATCGTAAGATtgattaccgagtttatgtatcggaggataccgagg
gcgacggtaagagaaatgatacaaaacaaagtcgatagttgatgtacggc
tctatatcgcctttgctcacctaaacagacaacggtattttgatgttttt
accgtcgtcgagcaaagtggacggggattttggagacatgtcaactttgc
tttataccgtccccctcgatttatctcgaatacataaactcgccaTTAAT
TGAATGAATAACAGATTTGTTGAAATGTTTGATTTGACAACGGAAGTTAA
ACGAATGAATTTCAAAGGTTCAGTGTTAGTGGGAAGTGTTATGGTGTCAG
AGCTCTTAAGATGGAGGCGCTGATGTTCCTTACAGCTTTTGGAAATTGAA
ACGAAGATCGTCAATGGAAATCGGGTATATTACAGACTCGTAGTTTATGA
TTGATCCAAAAGTCCGCGATAACAAAAACGCATATAAAAAGATGCACAGA
CAAAAGGCTTTCAAAGcacaaacattttttataatatatattatatacag
tTTATTTtcgtaatattttttgttgaaaattttaacatgtTTAGCACACG
ATTACTATACTAGGTCTTTTTGATTACGgatagattttttttggataact
ttttaaattaaagGATATTTTTGTATAGTTTTTCACTACTCTAGATTATT
TTTCTaatcttaagaacaaatttGTCGGTCTATAATTCGACAGAAGAATC
CCTCTACTCAGTGTTTGACGCACTACTTCAAACCTCGTCCTTGTTTAAAA
CTTTCGAATGTGCTAATCACACATTAGGCTCAACTTCGTTATACTTTCCT
CATTCGTTAAGTATTTCTTCACTTTTTACATTGCTCGATACATAAGTAGA
GTGATGTCAGTCAGAAAGAAGAatagacacttttttattcagCTACT
Run BLAST on NCBI

protein sequence of cysteine and glycine-rich protein

>TCONS_00014761-protein ID=TCONS_00014761-protein|Name=cysteine and glycine-rich protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
MPFKPVAAPKCGRCGKSVYPAEQRLAANCSWHFGGCFTCKICNKTLSSTT
LAEHKESKEIYCKSCYGKHFGPKGYGYGAGAGTLSMDAGANGWTKNNAPL
NENLSSHKYLGGNECGRCGGSVYSAEEILGAGLSWHKGCFTCKDCNKRLD
SKTVSENIDEQDIYCKACYGKHFAPKGYGYGSGAGALKNTGMTPS
Run BLAST on NCBI

transcript from alignment at sc0000198:124992..129725+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014761 ID=TCONS_00014761|Name=TCONS_00014761|organism=Clytia hemisphaerica|type=transcript|length=4734bp|location=Sequence derived from alignment at sc0000198:124992..129725+ (Clytia hemisphaerica)
TAATAACATCGTTTTGGAATAATTCCAATTTGATCAATCCATGATTACCT
GAAGACAATTCATTGGTTGGTACTCATAACCTAACCACAATTCATGATTT
CGTTGTTGCTTAGATAATCAGAAAGACTTTTGATGGATGCTTTTTACTTT
GGTTAGTAGGCAGTTCCTTTCTCTTTCAGCCTTTTGATGGCAAACAATTG
TGGTATGGAGTCTATGAGACGGGATACAGTTTTGTTCAGCCTATTATGCG
TACATattattatgaaattgtttctttCGTTTTTGGTTTTTATGAGTTTT
GGATGAGGGCActtttaaagtgaattttttggatttgaagttCAAGCTAT
ATTAGACAAGGGGTCATCAGTATATTACGCACGCATTGAAGTGGGGAGAG
TGGACTTAGCAAAACCgtacttattttttgaattatgtCCTAATTGTTCT
CTATGATGCACACACGAGGAAGAGTGTACGAACTAAGGATGACCCTCAAG
CAGAACATGTTTCTTTGCATTCGTTTTTATAGAAACGAAAAATTTTGTCG
AAACTATCAACAAGGTCTTACAAGTTTCTGTCGCACGATAATAACATTTc
atcagtcagtcagtcagtcactcactcactcacgaCCAGTGCTGTTGTTT
GCTTACTCAGCATTAAGATTCTTCTGGTTATTGTTAgcctttgaaaataa
tttaaaatatgcGTTACTCCTCTCTCGTTGTGCCAGTTTAAAGTTGTAGA
ATTGTATGGGAATCCAGATCATTAAAACTTTAAGTGGTTAAAGGCAAATC
AAAAGAACTTGTTGTCTCCCAGAGTTTCTAATGTTTCAAACGTCTAATTG
CATAACATCTTTTTATCACGATCTAAAAGTTCTGCGGCTTTCCACTCCAA
AAATGAGCTTAACAGTTTTCTATTTTCTGTGGTCAGAGAGTCTGTTAGTA
GGACTAGAAGATACATAATAGGAGaacatagtttttgaaattgtctgTGT
GAAATTATTAGTTCGTGGCTTAAATATTCCAAATTACCATTGGTCCATTA
GAATATAGTTTTATCtcgtcaagaaaaaaaaattatttacatttaaaaat
ttagaattataaaaaatatttaaaatgccTTTCAAACCTGTCGCAGCACC
AAAATGTGGACGTTGTGGAAAATCCGTCTACCCTGCAGAACAAAGGCTAG
CGGCAAACTGTTCATGGCATTTTGGAGGCTGTTTCACTTGTAAAATTTGT
AATAAAACTCTCTCTTCTACAACTCTGGCTGAACACAAAGAAAGTAAGTA
TATTAAGATTGACAGTCTAGTCTTGCGATCGTAGACGGAGGCGAATCGAA
CGTGTTTGCTTTCGATAGCTATCAACCCAGAGGTCGGCGAGGGCATGAGT
TTTCTCCCTGGATCTCTTGGCTTAACCTTTATGTTTACCTTTAATTGTCG
AGCATTAAGCAGAGAGACATCAAGCACCGTGTTGTCATGAACCGGCCATT
AAACCCATGACCTTTAGCCATAGCTGAATGCCCTAGCTTTACACTATGGT
TCACCACTCTACCGCGGTCGGCTTTTTAGGGGACTGGTAATGATATTACG
AACTAAGCAAATTTCCGCCAAAACTGTGGACACATTCTGCGACGGAGTGA
AAACTATTTTCAGCATTCAAAAAACTTCACTATATTGACGTTACTTTATC
GCTTCAATGTAAAGGTATCTTACATTTTTCACAAGAGCACTCCTACACTT
GTGTTTCGATACTGTCGTCGAGAAgaattttcttgtattttcgttACCAG
TCTCCTCCGCGCTGCAAAATGTTGATAGGTGTACATTTTTTAACGTGTTT
AGACGTGTGTTGGCTTTGTAGGCATGTGGCAGTCAGAAGGAGGTAATAAT
ACAGGGGTCGTCCAGATCATTAGTATTTGACTTTTAGCTTGCAATATTCA
ATtcgtgagacaggggtgtagttATTTATTAATATTTgattatcaatttt
gtcaatttcagGCAAGGAGATTTATTGCAAATCGTGTTACGGCAAACATT
TCGGTCCAAAAGGTTACGGATACGGTGCCGGAGCTGGAACACTCAGTATG
GACGCTGGAGCTAATGGATGGACAAAGAACAACGCGCCTTTGAACGAGAA
TTTGAGCTCACATAAATATCTGGGCGGTAATGAATGTGGGCGTTGTGGAG
GCTCTGTCTACAGCGCGGAAGAAATTCTGGGTGCAGGACTTGTAAGTTAT
CGCTCAAatcttttgaattctttttttcgaCAAATGTGACACtaacattc
aactttttctatttttcatttaattgCATAAAAATTGATTCTAGTAAAAA
GGTAAATTCATTTGAATTGGTTATTTTTTTGGGCCAATTCGCCTAATgct
aaatctttaattttcaaaattcattgcgaACTTAAGACGTGTAACCATCG
AAATATcattaaattagaaaaaagttagcattgatgttttgatttttgaa
ctACACGGTTTTTATTAgcgcaaactatataagaacataatgcttgGATA
GcctaaaattaagaacaagttgagaacattttaagactttgcagAATCTA
AACACCCAATTTAGTGGAGATagtggacaaaaatactcccaaaattttga
aaataagaacatattaagaacatttttaagcttaaactCAAGAAGTTAAC
AACATCCgaagattcaaaaaattttggatgttcttataaaaaacacctAA
GAATATAACAcataacttgattttttttcagtcgtGGCATAAAGGTTGTT
TCACATGTAAAGATTGCAACAAACGGTTAGATTCAAAAACAGTATCTGAA
AATATCGACGAACAAGATATATATTGCAAAGGTATGATTTCGTTTTTGAT
AATAACTTCTTTAAAGAAGtacaatgggccattccattttatatccatac
agaggGTGGACGAatatttccagagggtaatccgagaaaaatttccaggg
gtgtttttcatttttccaagggtgttaaaagttattctaaaatatcCAGG
AagtaaaagactgatttcagTTCGTTCAcccctcactttaaggtatgaaa
agagggtatttttgcaaattttgccattttccagggggtatccacatatt
ttcaataattcttttctacttgaaaaggttcgtctacCCCCGCCCCCTGC
ATGGTTTTTAATAGAACAAATAGTGTAGCAAATCTATAGAATACCATTTG
TGACGTAGTAATAGCATACTGGTTAGGTACCTAGCTACACTTTAAACACC
CTATGACATACAGACGGTGAAGCTGCTACTGGAAGAATTGATAGCCTTCG
GTGATGTAAAATACCGTGAAATTTCTTTCTTATTGGAAACGGCGAAACAA
CTCCGGAAAGAGTTCTTGACACCCCTGAAACTCTCATCCCGACTgggaaa
aacattttaattctGGCAGTGGATTTCAATATATCAACaaagttttaatt
gaaaatattataacaatttgataatattttatCCATTTCNAAAACATTTT
AATTCTGGCAGTGGATTTCAATATATCAACaaagttttaattgaaaatat
tataacaatttgataatattttatCCATTTCTGCAAATATTACTCGGGAT
TAAAAGGAAATTTCCCGAATCTAATTTAATCTTaagcttcttctttcttt
tcctttctAGCTTGTTATGGCAAGCATTTTGCACCTAAAGGCTATGGTTA
TGGCTCAGGGGCTGGAGCTCTCAAAAATACTGGTATGACGCCATCGTAAG
ATtgattaccgagtttatgtatcggaggataccgagggcgacggtaagag
aaatgatacaaaacaaagtcgatagttgatgtacggctctatatcgcctt
tgctcacctaaacagacaacggtattttgatgtttttaccgtcgtcgagc
aaagtggacggggattttggagacatgtcaactttgctttataccgtccc
cctcgatttatctcgaatacataaactcgccaTTAATTGAATGAATAACA
GATTTGTTGAAATGTTTGATTTGACAACGGAAGTTAAACGAATGAATTTC
AAAGGTTCAGTGTTAGTGGGAAGTGTTATGGTGTCAGAGCTCTTAAGATG
GAGGCGCTGATGTTCCTTACAGCTTTTGGAAATTGAAACGAAGATCGTCA
ATGGAAATCGGGTATATTACAGACTCGTAGTTTATGATTGATCCAAAAGT
CCGCGATAACAAAAACGCATATAAAAAGATGCACAGACAAAAGGCTTTCA
AAGcacaaacattttttataatatatattatatacagtTTATTTtcgtaa
tattttttgttgaaaattttaacatgtTTAGCACACGATTACTATACTAG
GTCTTTTTGATTACGgatagattttttttggataactttttaaattaaag
GATATTTTTGTATAGTTTTTCACTACTCTAGATTATTTTTCTaatcttaa
gaacaaatttGTCGGTCTATAATTCGACAGAAGAATCCCTCTACTCAGTG
TTTGACGCACTACTTCAAACCTCGTCCTTGTTTAAAACTTTCGAATGTGC
TAATCACACATTAGGCTCAACTTCGTTATACTTTCCTCATTCGTTAAGTA
TTTCTTCACTTTTTACATTGCTCGATACATAAGTAGAGTGATGTCAGTCA
GAAAGAAGAatagacacttttttattcagCTACT

Coding sequence (CDS) from alignment at sc0000198:124992..129725+

>TCONS_00014761 ID=TCONS_00014761|Name=TCONS_00014761|organism=Clytia hemisphaerica|type=CDS|length=2352bp|location=Sequence derived from alignment at sc0000198:124992..129725+ (Clytia hemisphaerica)
atgccTTTCAAACCTGTCGCAGCACCAAAATGTGGACGTTGTGGAAAATC
CGTCTACCCTGCAGAACAAAGGCTAGCGGCAAACTGTTCATGGCATTTTG
GAGGCTGTTTCACTTGTAAAATTTGTAATAAAACTCTCTCTTCTACAACT
CTGGCTGAACACAAAGAAAGCAAGGAGATTTATTGCAAATCGTGTTACGG
CAAACATTTCGGTCCAAAAGGTTACGGATACGGTGCCGGAGCTGGAACAC
TCAGTATGGACGCTGGAGCTAATGGATGGACAAAGAACAACGCGCCTTTG
AACGAGAATTTGAGCTCACATAAATATCTGGGCGGTAATGAATGTGGGCG
TTGTGGAGGCTCTGTCTACAGCGCGGAAGAAATTCTGGGTGCAGGACTTt
cgtGGCATAAAGGTTGTTTCACATGTAAAGATTGCAACAAACGGTTAGAT
TCAAAAACAGTATCTGAAAATATCGACGAACAAGATATATATTGCAAAGC
TTGTTATGGCAAGCATTTTGCACCTAAAGGCTATGGTTATGGCTCAGGGG
CTGGAGCTCTCAAAAATACTGGTATGACGCCATCGTAAatgccTTTCAAA
CCTGTCGCAGCACCAAAATGTGGACGTTGTGGAAAATCCGTCTACCCTGC
AGAACAAAGGCTAGCGGCAAACTGTTCATGGCATTTTGGAGGCTGTTTCA
CTTGTAAAATTTGTAATAAAACTCTCTCTTCTACAACTCTGGCTGAACAC
AAAGAAAGCAAGGAGATTTATTGCAAATCGTGTTACGGCAAACATTTCGG
TCCAAAAGGTTACGGATACGGTGCCGGAGCTGGAACACTCAGTATGGACG
CTGGAGCTAATGGATGGACAAAGAACAACGCGCCTTTGAACGAGAATTTG
AGCTCACATAAATATCTGGGCGGTAATGAATGTGGGCGTTGTGGAGGCTC
TGTCTACAGCGCGGAAGAAATTCTGGGTGCAGGACTTtcgtGGCATAAAG
GTTGTTTCACATGTAAAGATTGCAACAAACGGTTAGATTCAAAAACAGTA
TCTGAAAATATCGACGAACAAGATATATATTGCAAAGCTTGTTATGGCAA
GCATTTTGCACCTAAAGGCTATGGTTATGGCTCAGGGGCTGGAGCTCTCA
AAAATACTGGTATGACGCCATCGTAAatgccTTTCAAACCTGTCGCAGCA
CCAAAATGTGGACGTTGTGGAAAATCCGTCTACCCTGCAGAACAAAGGCT
AGCGGCAAACTGTTCATGGCATTTTGGAGGCTGTTTCACTTGTAAAATTT
GTAATAAAACTCTCTCTTCTACAACTCTGGCTGAACACAAAGAAAGCAAG
GAGATTTATTGCAAATCGTGTTACGGCAAACATTTCGGTCCAAAAGGTTA
CGGATACGGTGCCGGAGCTGGAACACTCAGTATGGACGCTGGAGCTAATG
GATGGACAAAGAACAACGCGCCTTTGAACGAGAATTTGAGCTCACATAAA
TATCTGGGCGGTAATGAATGTGGGCGTTGTGGAGGCTCTGTCTACAGCGC
GGAAGAAATTCTGGGTGCAGGACTTtcgtGGCATAAAGGTTGTTTCACAT
GTAAAGATTGCAACAAACGGTTAGATTCAAAAACAGTATCTGAAAATATC
GACGAACAAGATATATATTGCAAAGCTTGTTATGGCAAGCATTTTGCACC
TAAAGGCTATGGTTATGGCTCAGGGGCTGGAGCTCTCAAAAATACTGGTA
TGACGCCATCGTAAatgccTTTCAAACCTGTCGCAGCACCAAAATGTGGA
CGTTGTGGAAAATCCGTCTACCCTGCAGAACAAAGGCTAGCGGCAAACTG
TTCATGGCATTTTGGAGGCTGTTTCACTTGTAAAATTTGTAATAAAACTC
TCTCTTCTACAACTCTGGCTGAACACAAAGAAAGCAAGGAGATTTATTGC
AAATCGTGTTACGGCAAACATTTCGGTCCAAAAGGTTACGGATACGGTGC
CGGAGCTGGAACACTCAGTATGGACGCTGGAGCTAATGGATGGACAAAGA
ACAACGCGCCTTTGAACGAGAATTTGAGCTCACATAAATATCTGGGCGGT
AATGAATGTGGGCGTTGTGGAGGCTCTGTCTACAGCGCGGAAGAAATTCT
GGGTGCAGGACTTtcgtGGCATAAAGGTTGTTTCACATGTAAAGATTGCA
ACAAACGGTTAGATTCAAAAACAGTATCTGAAAATATCGACGAACAAGAT
ATATATTGCAAAGCTTGTTATGGCAAGCATTTTGCACCTAAAGGCTATGG
TTATGGCTCAGGGGCTGGAGCTCTCAAAAATACTGGTATGACGCCATCGT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008264XLOC_008264Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014761-exon-sc0000198-1491911889:124992..126284TCONS_00014761-exon-sc0000198-1491911889:124992..126284Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1510915933:124992..126284TCONS_00014761-exon-sc0000198-1510915933:124992..126284Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1575043694:124992..126284TCONS_00014761-exon-sc0000198-1575043694:124992..126284Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1491911889:127003..127232TCONS_00014761-exon-sc0000198-1491911889:127003..127232Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1510915933:127003..127232TCONS_00014761-exon-sc0000198-1510915933:127003..127232Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1575043694:127003..127232TCONS_00014761-exon-sc0000198-1575043694:127003..127232Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1491911889:127773..127872TCONS_00014761-exon-sc0000198-1491911889:127773..127872Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1510915933:127773..127872TCONS_00014761-exon-sc0000198-1510915933:127773..127872Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1575043694:127773..127872TCONS_00014761-exon-sc0000198-1575043694:127773..127872Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1491911889:128702..129725TCONS_00014761-exon-sc0000198-1491911889:128702..129725Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1510915933:128702..129725TCONS_00014761-exon-sc0000198-1510915933:128702..129725Clytia hemisphaericaexon
TCONS_00014761-exon-sc0000198-1575043694:128702..129725TCONS_00014761-exon-sc0000198-1575043694:128702..129725Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
cysteine and glycine-rich proteinTCONS_00014761-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:124992..129725 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.20077	4.38442	1.12925	0.854851	4.70973	3.53635	11.2867	11.1838	10.2381	11.6082	6.38795	7.69517	10.2862	9.04306	7.9828	6.90903	7.88707	10.1374	6.31767	8.72517	6.16677	7.34127	3.85718	4.34052	2.68839	2.51495	4.42622	5.60673	181.367	210.239
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM
Blast
[Close]
BLAST of TCONS_00014761 vs. Swiss-Prot (Human)
Match: CSRP2 (Cysteine and glycine-rich protein 2 OS=Homo sapiens GN=CSRP2 PE=1 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 3.304e-43
Identity = 101/186 (54.30%), Postives = 121/186 (65.05%), Query Frame = 3 
Query: 1152 KCGRCGKSVYPAEQRLAANCSWHFGGCFTCKICNKTLSSTTLAEHKESKEIYCKSCYGKHFGPKXXXXXXXXXTLSMDAGANGWTK------NNAPLNENLS--SHKYLGGNECGRCGGSVYSAEEILGAGLSWHKGCFTCKDCNKRLDSKTVSENIDEQDIYCKACYGKHFAPKGYGYGSGAGAL 1685
            KCG CG++VY AE+      S+H   CF C +C K L STT+A H E  EIYCKSCYGK +GPKGYGYG GAGTL+MD G     K      +    N N S  + KY G  +C RCG SVY+AE+I+GAG  WHK CF C  C K L+S T++E   E +IYCK CY K+F PKG+GYG GAGAL
Sbjct:    9 KCGACGRTVYHAEEVQCDGRSFHRC-CFLCMVCRKNLDSTTVAIHDE--EIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESVQPHRPTTNPNTSKFAQKYGGAEKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEK--EGEIYCKGCYAKNFGPKGFGYGQGAGAL 189

HSP 2 Score: 90.1225 bits (222), Expect = 7.886e-20
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 3 
Query: 1455 GGNECGRCGGSVYSAEEILGAGLSWHKGCFTCKDCNKRLDSKTVSENIDEQDIYCKACYGKHFAPKGYGYGSGAGAL 1685
            GGN+CG CG +VY AEE+   G S+H+ CF C  C K LDS TV+  I +++IYCK+CYGK + PKGYGYG GAG L
Sbjct:    6 GGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVA--IHDEEIYCKSCYGKKYGPKGYGYGQGAGTL 80
The following BLAST results are available for this feature:
BLAST of TCONS_00014761 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CSRP23.304e-4354.30Cysteine and glycine-rich protein 2 OS=Homo sapien... [more]
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