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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014739 ID=TCONS_00014739|Name=TCONS_00014739|organism=Clytia hemisphaerica|type=transcript|length=3816bp
tagctataaaaaataaataaaagtcaAATCTAAAATGCACAATAAACATC
ATACTatacatatttttataaaaagaagaaacaccCTTGGTCAAGGATCA
ATGTCAACTCGGAACAAACTTATGGGGTTTGTtacttttataaagaaaag
gcTATAGTTTGTTCAAGAGAAATGGAGTAACCTTTTTATCAAGATCTATT
GTTCAGgaagtttcatttttgatttgattgaggaaaaaagaaagaataac
cAATCAAAATGGGAGATAAAATATCAATAGGAACAGAAGGTTCTTTGAGA
CCAAGGCATTATATTATACCATCGAATGAAGTAAAAGCTACTCCAAACGA
GCACCATGTCAACACTTACAACCTACCAGTCCCTGACCCTTTTCATCCAA
CAATATTTCGATGTCAGAATGGTAGGCTTATCCTTTACGATGAAAGGCTG
AAAACGTTTTACTCCACtaaattgaatgaaaattctttcaaaGCTCTTCA
TTTTGATGGTTGGAATGTTGAGAATTTTGATTTTACAGCGTNTaatgaaa
attctttcaaaGCTTTTCATTTTGATGGTTGGAATGTTGAGAATTTTGAT
TTTACAGCGTTTTCTGGTGATATGAACTTAGCTATTGGTTTTTCTAAACC
GTTGCCAAGGAAGAAATCCAGAAAATCTCCACAAAGTGGAAGTTTGATGA
ATATGAATATTTTCGATTTCGAAAAACGTTCATTAACTGAAACATCCTTA
TCTTTGGGGATTGAGACCATTGATTGTTTCTTTTCTGCAACAATCTCGCC
CAATAATAAGTTGCTTTCTGTACTCTACCGAACAACAAAATCTTCTAAGC
ACATCATCTGTAAGATCTTTCAATTCACAAAATCAGGTGGCTTTAAACAA
CATCGAACCTTTCGTATACAGAGCCTTGGGTATGAGAGGGTTAAGTATGT
ATGTAGTTCATCATTCAATGAACATGAGAATCTGTTAATGGTGAACATTA
ACCGAATACCACGTCATGTTGATACAGAGAGCATTTCTGTTTATGACATC
GACAAAAAGAAGCTAAATTATATTTCCTACGAAAGTCAAGGGTTTCTTGT
AGAATCTTTCTTGGTAAGTACCAATCAAGGTCCTTTTGTTTTCGTGTTGG
ACTTGCGCGATACCAGGATAACTGGTTACAAGCTTGATTTGGTCACTGGT
GCACATTCTAAAGTCAGCAGTATGAAACTAATCACTGGCAATTTTATCGA
TGAACCATTCGATGTTGAAATGAAAGTTTATTTTAATACAACAATACGTA
TCTTTCTATCGTCCAATGAAAAGCTTTACATTTTATGTCCATTTGAAGAC
AAAATTATCAAGAAGTTTCCTTTATTGCCAGAAGAGAAGCCTTTTCATTG
AGCATCGAAAAATAGCCATTAATTGTTCTGGTGAAGAAATATTTGTATTT
TGTCAGTTAATGCACGGTGCTTTTAAACATCGATACAAGCTCACCATGTT
TCACTATAATGAAGATGACTCACCGAAGAATTCTTTGTTGCAACTTGCAA
AGAGGTCTGTTCTTTCTAACTTTAATAAAAGTCAGTTGGAGAATTTTAAT
CTACCTCGTTCATTGAAAGAAATGCTTGGCGTCTTGTAAATGTGTTTTTG
GAGAACATTTCTTGCCGTCAAGCTTTCATATGACTTGTGATATTTAGTTT
GTATTTTGATCAAACATTTTGACGATTAAACACTTCCAATCTACGAAAAA
TAACGGAAAGTATTTTATTCCAACTATGATGATTTATTTCAACTAAATAC
TTTGACTATAAGTTAGTAGCTTATTGCATTGTATTTTTGGCAGCGAAACT
TCTTTTTTTGGCAAATATTGACATTTCCAAGACCATTTTAAGGAAAGTTT
AGACCTTTTTGACGTAACCAGCCTTATTTCAGCTGTTTTGTAGCCCTGCA
TTGACCACTAGTCATACCAGTTAATTAACTCTTAACTCTTTTTAAAGGTT
CTCGAAAGTATACCACTcgcttttctgttttcttttgacTCGTATGTCTT
TTTGTTCTCCCTGAAATCCAAAGATCTaattttgaataataatatttttg
actAACTTATTGACCATATGCTTTTATAGAGTGTTAGAAATATTAATTCC
AAAATGTTGGCAACAACGTTTACACAAGAAGAGGCGAAGAACTGTTCCAA
GAAATACATTATTCCttggaatcaaatcaatattcaTTCTAATAAACCAA
TCAAAAGGTTTTACCCTGGTCTCAGCAGAAAATTTGGCTGCTCTCAAGGA
GAGATTGTTCTTTACATAACTGAAAAACCTTTTGGTTTTTGTGCAACTTC
GCTTGATTGTGAGTCGTTTAGTAAGTCGGGGCTGTTGCTATTATCAGGTG
AACCATCTAAACCGTTTGCTTTATCTAACGATCAATCGATAGCAGTTGGT
TTTGTCCAAGAAAGATTAACTAAATATTccgaacaaatgatggaacaGTA
CCCAACATATCAACGTACTTACGAAATGACCCCTAGCGATCCTCGAAAGA
CCACAATGAAAATATACCACATTGAAAAAGACGAGTTGGTTTATAAGAAT
TTGACGACACTTGGAGGTCCATACATGCTTGTGTATTATTGTGCATTCTC
TCCCAGCAATAACCTCATGGCTTTGATCTACAGTAAAGACGACCCTTTTG
TTTTCCAATGCATCATTTTCAAATTCGATCCATCTGGAAATTGTGAGCCT
TTCCGAACTTTCAAAAGTGATGCTTTCGGTAAAATGTATTATACTACATT
CAACAGTTCAGAAGATCTCTATTTGGTGAAACTTGACAGCGATGAAAGCA
CTGGAATCCTTATTGTATACGATTTAACTCGAATGAAAACGATAACTGTT
CATTATGATGAAGATGTATTTGTTTTGCAAGCTGATTTGATCAGTACGCC
AAAACAAGATTTGATTTCACCtgttattcagatttcaacgtCAACGCTTA
CGAAATTGATCGAGAGAGTTCCACCACAAAACTAATCATTGATTGGGATG
TTAAAACAGATCTCGACATCCAAATTGAGTGCGGAGCGTTTAAAGTTCAT
TATTTCACAAAGATTCGAGTCTATCTATCGACAGATGAAAAGTTATACGT
CCTTTGTCCGTTTCAGAAAGTTATTTTACAATCATTTGACGTAAACATGG
AAAACATTATCGATAGAGTAAGTCAAGAAATTATCCTCAATTGGTCTGGG
GAAGAAATCTTCCTCAGTACTTTAGATTCGTGTCATACTTTACTCATGGC
TCAAGCTGAAGTGTCGGTGTATTTTTTCTGTGAAGAAAAGGAGAAACACA
ATTCTCTGTTCACTTTCGCCAAACGAGCTGTCCACGCTAATTACActata
aatcaactgaagacTTTCAATCTTCCTTTAATTTTGAGATCACTACTTGG
TCTTATGGGGTAAGGGTCTACGTTGCTGGTATTAgatgaatttcatttta
ttgacACTCAATAAAGCAAAATAAAGTGGTGTAGTTTGATATTTTGGATA
TGAAACAGAAGTCACGTTGGTTATTAAGATACTTAACCTGACtcaacaaa
aacagaaaacagaTTTAGAATCTCGATTTTATGTCTTCTAATTTGTTTCA
TTATTTGTCATTTGTTAGTATTAAATTTCTTTACATTTATTGTACTGTAG
GAACCTTTCTTtgtatatattattttcataaaaacgAAAATTATCATCAA
GTATTATCATTGTTGTATACAAATTATTATTCTGTGCCAGAATTTTTCTT
ACGTAGCGTATTACAG Run BLAST on NCBI transcript from alignment at sc0000197:373870..378936- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014739 ID=TCONS_00014739|Name=TCONS_00014739|organism=Clytia hemisphaerica|type=transcript|length=5067bp|location=Sequence derived from alignment at sc0000197:373870..378936- (Clytia hemisphaerica)
TAGCTATAAAAAATAAATAAAAGTCAAATCTAAAATGCACAATAAACATC
ATACTATACATATTTTTATAAAAAGAAGAAACACCCTTGGTCAAGGATCA
ATGTCAACTCGGAACAAACTTATGGGGTTTGTTACTTTTATAAAGAAAAG
GCTATAGTTTGTTCAAGAGAAATGGAGTAACCTTTTTATCAAGATCTATT
GTTCAGGAAGTTTCATTTTTGATTTGATTGGTAAGTTTTCTCTGTTATTT
AGTTCAAATGATCAAAAGTATTCGCAAAATTTGAAGAAGTATTGTTTTAA
AAACATCTTCTGAATGAACAGAGAATTTTAATCTTGTTTCAATTATTCTA
AGCCCAGTTTAGATAAAGAGTTTTGAGGATTTTACGTTATATAAAAATTG
GGCCGCTTTTTTCGGACACACCGTACATTGCGAGATTATTACCTAATGAT
CTATACCTTTCTTTCATCTCACGGTTTCAGAGAATTACCATGTTGTAGAC
AAAAAAAGGCTGAAAGAGGTTTTGTTGAATATGCTACTGTGTTTTACGAA
TTTCACACCGAAGACATTACAGTTTACGATACCATAGGTTAGGAGCATAT
AAAGCATCCCTTACTATGAGACAAAGAAAGAATAGGCGGCGCCAACGATA
GAAATGATTCAGTGCTCTTGTCTTGTCACCTCAAAATGTCCATTTGTTTG
AACAAAAATATTTATCCGAATCCAAATTGATGCTCTCAACTTCAGTCGAG
TTAGGATCTGAGAATGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTCTGTG
TATGTCCCAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGTTTGATT
TGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTGGGGGTGTTT
TCTTCATTTTTTGAAAATTTTGATTTTTGGGGACTGGGGGCGAGTTTTTT
GCCAAAACGAGGCTAAAGCTTTGGGGCAGCCTGGAGACTTCAAAAATGGT
CGGATTTGGCTGAAATTTGGCACATTTGTTCCTTGAGTGAATATCTGGAG
GTGTTCTTTTTAATTTTTGAAAATTTTGATTTTTGGGGTCTGGGGACGAG
TTTTTCGCCAAAACGAGGTTAAAACTTTGGGGCAGCCTGGAGACTTAATA
AAAAATTGTTCGATTTGGCTGAAATTTTGCACATTTGTTCCTTGGGTGAA
TATCTGGGGGTGCTTTTTGCATTTTTCAATTTTGATTTTTGGGGCCTGGG
GACGAGTTTTTTGCCAAAACGAGGCTAAAGCTTTGGAGCAGCCTACATGC
CTCCAGAATGGTCGGATTTGGTTGAAATTTGGCACACTTGTTCGTTGGGT
GAATATCTGGGGGTCTACAATTGGGCCTATGAATAATTTGAAGCCACTGA
AGTTGAGCCCAGTGCGTTGCGCACATTCGACTATTTACAATTATCATCTT
TAAATCTGACTTTTGGTTTCATTATTTTTAGAGGAAAAAAGAAAGAATAA
CCAATCAAAATGGGAGATAAAATATCAATAGGAACAGAAGGTTCTTTGAG
ACCAAGGCATTATATTATACCATCGAATGAAGTAAAAGCTACTCCAAACG
AGCACCATGTCAACACTTACAACCTACCAGTCCCTGACCCTTTTCATCCA
ACAATATTTCGATGTCAGAATGGTAGGCTTATCCTTTACGATGAAAGGCT
GAAAACGTTTTACTCCACTAAATTGAATGAAAATTCTTTCAAAGCTCTTC
ATTTTGATGGTTGGAATGTTGAGAATTTTGATTTTACAGCGTNTAATGAA
AATTCTTTCAAAGCTTTTCATTTTGATGGTTGGAATGTTGAGAATTTTGA
TTTTACAGCGTTTTCTGGTGATATGAACTTAGCTATTGGTTTTTCTAAAC
CGTTGCCAAGGAAGAAATCCAGAAAATCTCCACAAAGTGGAAGTTTGATG
AATATGAATATTTTCGATTTCGAAAAACGTTCATTAACTGAAACATCCTT
ATCTTTGGGGATTGAGACCATTGATTGTTTCTTTTCTGCAACAATCTCGC
CCAATAATAAGTTGCTTTCTGTACTCTACCGAACAACAAAATCTTCTAAG
CACATCATCTGTAAGATCTTTCAATTCACAAAATCAGGTGGCTTTAAACA
ACATCGAACCTTTCGTATACAGAGCCTTGGGTATGAGAGGGTTAAGTATG
TATGTAGTTCATCATTCAATGAACATGAGAATCTGTTAATGGTGAACATT
AACCGAATACCACGTCATGTTGATACAGAGAGCATTTCTGTTTATGACAT
CGACAAAAAGAAGCTAAATTATATTTCCTACGAAAGTCAAGGGTTTCTTG
TAGAATCTTTCTTGGTAAGTACCAATCAAGGTCCTTTTGTTTTCGTGTTG
GACTTGCGCGATACCAGGATAACTGGTTACAAGCTTGATTTGGTCACTGG
TGCACATTCTAAAGTCAGCAGTATGAAACTAATCACTGGCAATTTTATCG
ATGAACCATTCGATGTTGAAATGAAAGTTTATTTTAATACAACAATACGT
ATCTTTCTATCGTCCAATGAAAAGCTTTACATTTTATGTCCATTTGAAGA
CAAAATTATCAAGAAGTTTCCTTTATTGCCAGAAGAGAAGCCTTTTCATT
GAGCATCGAAAAATAGCCATTAATTGTTCTGGTGAAGAAATATTTGTATT
TTGTCAGTTAATGCACGGTGCTTTTAAACATCGATACAAGCTCACCATGT
TTCACTATAATGAAGATGACTCACCGAAGAATTCTTTGTTGCAACTTGCA
AAGAGGTCTGTTCTTTCTAACTTTAATAAAAGTCAGTTGGAGAATTTTAA
TCTACCTCGTTCATTGAAAGAAATGCTTGGCGTCTTGTAAATGTGTTTTT
GGAGAACATTTCTTGCCGTCAAGCTTTCATATGACTTGTGATATTTAGTT
TGTATTTTGATCAAACATTTTGACGATTAAACACTTCCAATCTACGAAAA
ATAACGGAAAGTATTTTATTCCAACTATGATGATTTATTTCAACTAAATA
CTTTGACTATAAGTTAGTAGCTTATTGCATTGTATTTTTGGCAGCGAAAC
TTCTTTTTTTGGCAAATATTGACATTTCCAAGACCATTTTAAGGAAAGTT
TAGACCTTTTTGACGTAACCAGCCTTATTTCAGCTGTTTTGTAGCCCTGC
ATTGACCACTAGTCATACCAGTTAATTAACTCTTAACTCTTTTTAAAGGT
TCTCGAAAGTATACCACTCGCTTTTCTGTTTTCTTTTGACTCGTATGTCT
TTTTGTTCTCCCTGAAATCCAAAGATCTAATTTTGAATAATAATATTTTT
GACTAACTTATTGACCATATGCTTTTATAGAGTGTTAGAAATATTAATTC
CAAAATGTTGGCAACAACGTTTACACAAGAAGAGGCGAAGAACTGTTCCA
AGAAATACATTATTCCTTGGAATCAAATCAATATTCATTCTAATAAACCA
ATCAAAAGGTTTTACCCTGGTCTCAGCAGAAAATTTGGCTGCTCTCAAGG
AGAGATTGTTCTTTACATAACTGAAAAACCTTTTGGTTTTTGTGCAACTT
CGCTTGATTGTGAGTCGTTTAGTAAGTCGGGGCTGTTGCTATTATCAGGT
GAACCATCTAAACCGTTTGCTTTATCTAACGATCAATCGATAGCAGTTGG
TTTTGTCCAAGAAAGATTAACTAAATATTCCGAACAAATGATGGAACAGT
ACCCAACATATCAACGTACTTACGAAATGACCCCTAGCGATCCTCGAAAG
ACCACAATGAAAATATACCACATTGAAAAAGACGAGTTGGTTTATAAGAA
TTTGACGACACTTGGAGGTCCATACATGCTTGTGTATTATTGTGCATTCT
CTCCCAGCAATAACCTCATGGCTTTGATCTACAGTAAAGACGACCCTTTT
GTTTTCCAATGCATCATTTTCAAATTCGATCCATCTGGAAATTGTGAGCC
TTTCCGAACTTTCAAAAGTGATGCTTTCGGTAAAATGTATTATACTACAT
TCAACAGTTCAGAAGATCTCTATTTGGTGAAACTTGACAGCGATGAAAGC
ACTGGAATCCTTATTGTATACGATTTAACTCGAATGAAAACGATAACTGT
TCATTATGATGAAGATGTATTTGTTTTGCAAGCTGATTTGATCAGTACGC
CAAAACAAGATTTGATTTCACCTGTTATTCAGATTTCAACGTCAACGCTT
ACGAAATTGATCGAGAGAGTTCCACCACAAAACTAATCATTGATTGGGAT
GTTAAAACAGATCTCGACATCCAAATTGAGTGCGGAGCGTTTAAAGTTCA
TTATTTCACAAAGATTCGAGTCTATCTATCGACAGATGAAAAGTTATACG
TCCTTTGTCCGTTTCAGAAAGTTATTTTACAATCATTTGACGTAAACATG
GAAAACATTATCGATAGAGTAAGTCAAGAAATTATCCTCAATTGGTCTGG
GGAAGAAATCTTCCTCAGTACTTTAGATTCGTGTCATACTTTACTCATGG
CTCAAGCTGAAGTGTCGGTGTATTTTTTCTGTGAAGAAAAGGAGAAACAC
AATTCTCTGTTCACTTTCGCCAAACGAGCTGTCCACGCTAATTACACTAT
AAATCAACTGAAGACTTTCAATCTTCCTTTAATTTTGAGATCACTACTTG
GTCTTATGGGGTAAGGGTCTACGTTGCTGGTATTAGATGAATTTCATTTT
ATTGACACTCAATAAAGCAAAATAAAGTGGTGTAGTTTGATATTTTGGAT
ATGAAACAGAAGTCACGTTGGTTATTAAGATACTTAACCTGACTCAACAA
AAACAGAAAACAGATTTAGAATCTCGATTTTATGTCTTCTAATTTGTTTC
ATTATTTGTCATTTGTTAGTATTAAATTTCTTTACATTTATTGTACTGTA
GGAACCTTTCTTTGTATATATTATTTTCATAAAAACGAAAATTATCATCA
AGTATTATCATTGTTGTATACAAATTATTATTCTGTGCCAGAATTTTTCT
TACGTAGCGTATTACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014739-exon-sc0000197-1575043694:378707..378936 | TCONS_00014739-exon-sc0000197-1575043694:378707..378936 | Clytia hemisphaerica | exon |
| TCONS_00014739-exon-sc0000197-1575043694:373870..377455 | TCONS_00014739-exon-sc0000197-1575043694:373870..377455 | Clytia hemisphaerica | exon |
| TCONS_00014739-exon-sc0000197-1510915933:378707..378936 | TCONS_00014739-exon-sc0000197-1510915933:378707..378936 | Clytia hemisphaerica | exon |
| TCONS_00014739-exon-sc0000197-1510915933:373870..377455 | TCONS_00014739-exon-sc0000197-1510915933:373870..377455 | Clytia hemisphaerica | exon |
| TCONS_00014739-exon-sc0000197-1491911889:378707..378936 | TCONS_00014739-exon-sc0000197-1491911889:378707..378936 | Clytia hemisphaerica | exon |
| TCONS_00014739-exon-sc0000197-1491911889:373870..377455 | TCONS_00014739-exon-sc0000197-1491911889:373870..377455 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:373870..378936 - |
Blast
The following BLAST results are available for this feature:
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