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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014428 ID=TCONS_00014428|Name=TCONS_00014428|organism=Clytia hemisphaerica|type=transcript|length=1124bp
GGGATCTATTAAATGAAAACGTATTCAGCACTTTTAGTAGCTCAAAAGTA
ACTTAAAAGCCTCTTAGACTTTTCTATAATCTTCGACTTCTATTGTGTTG
CGCAACAGCAAAACGGTCCAGACCGGTGTGAAAAATTGATTGTGTGTTCC
ACATTGCTACCATTATGGATTGAAGGGCGTCCATTGGAAACTGCAACCTC
CAACGATTGTTCGTACATTGTTCGAAGGTGGGGCGTGACGTGCAAGAACG
GAAAATTTGCAGTGAACGCTGGAAGCCTTGAAAGACAGATGAAACAGATG
AAGTTGATGTTGAAAGCGTTCCAAAGAAGAACCAAACGAAATATTGCTCA
AATGAATACAGAAGAAAAGGATAGTCGAATGGTAATATCATCAACAACTA
ATCACAGGAAACTTTCAATAAAGTTCCAAAAGCTATGGCTTAACTAAAAA
ATGAATAGAAATGTGGCAAAGTTGCATTTTGTGCTGGGAAAAAAACATTT
GCATTTTTTacaacttgttttttttttaaattaaaaaccaTAATTTACCA
AGCAGTTTCAATGCTAACTAGTGAACTTTCTGGAATTCCAATCTCAGTTT
TTCCACTTTTTATCATCAACCtaccacagatatcttacataaaacaataa
aaagggCTTCTTTATCTCTACTGAAATAAAGACACGAAGATGTACAATCA
AGTGACTTTTAGATATCTGTGCACCGGTAATGAAGTtagatttcaaatga
aaatcgCTGGATGAGTCTTTTTAGGAAAGCTTTCTTTGTTAACTTTTTCA
AGggatctttttgtttttccatCATCAATGTAAAAGAGTGTTATGTAAAT
AAGGGAATAAATATATTTAGAGTGTTATTATATtaaggccgctacccact
cagcattttatggtcggcgaCCAAGGCGTACGGCTCAAGCACTTTGGTCG
CTAAACACTTTTCTCGTTCCACAAAACGACAGCCTTTGGAGgcttaattt
atgcaataatggCTTGATTTATGCGAAAATTAAGCCACGCGCCTTGTTCG
CCGACCATAagatgctgagtgggtagcggtCTTTACAAGTATGAAGGTTA
ATCAAGAATTTTTCTTGATATTCA Run BLAST on NCBI transcript from alignment at sc0000187:262949..264828- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014428 ID=TCONS_00014428|Name=TCONS_00014428|organism=Clytia hemisphaerica|type=transcript|length=1880bp|location=Sequence derived from alignment at sc0000187:262949..264828- (Clytia hemisphaerica)
GGGATCTATTAAATGAAAACGTATTCAGCACTTTTAGTAGCTCAAAAGTA
ACTTAAAAGCCTCTTAGACTTTTCTATAATCTTCGACTTCTATTGTGTTG
CGCAACAGCAAAACGGTCCAGACCGGTGTGAAAAATGTAAGTTTTGCGTG
ATTAAAATAAGACTAAGTGCTACTAGGCTTGCAAGAAGGCGGTTGGAAAA
TCAGTCACACTTTATCAACAATAAAGTACTTTTTATTGTTTATCAAACAT
TTTCCCTATTGTTTTCCCCAAGTGTTTTGTAATAACATTAGCTTTGCTAG
GTGTCAAGGTTGGACTAGACTATAAAAGTGACCGATGATCAAAATGTGAA
AAATCATTTGCTTTAAAAAATATTGAGAGCAGAACTTTTTGAAACAACTT
ACTAAAACATATCATTATGTTCAATTATTCTCATTTCTTTGTAATAGTGA
TTGTGTGTTCCACATTGCTACCATTATGGATTGAAGGGCGTCCATTGGAA
ACTGCAACCTCCAACGATTGTTCGTACATTGTTCGAAGGTGGGGCGTGAC
GTGCAAGAACGGAAAATTTGCAGGTAAGGATAATGCCATTGATATTTATT
GACGTTGCTAATTTCTTTCTTGAAGTTGAAGTTTCTTGAAGCTTTCAAAT
TTACCTATGAAAATAGAATTGGACTTGGAGACCTTTGTTTTGTCTGAGTG
ACTTAAAAAATTCCACAATATTAGTCTGTAGGTCAGAACAAAAGAGATTT
TCGACGGATTTTTCAAATTAAGATTATTTTCTTTTCCAGTCATTTTTAAC
ATTCAAAATCAAAAATTTACCCATTGCAGGGGTATTACAAGCCTGTACAA
ATTCATCGACAGATACAGTACTTCCCTGTAGTATTCAACTTCTCTATAAA
TTAATCTNGAAATTTACCCATCAGGGGTATATACAAACATGTAAAATTCC
ATCGACATATACAGTTCCACCCTTTAGTATTCAACCTCTCTATAAATTAA
TCTTTATTGCACTTGTAGTGAACGCTGGAAGCCTTGAAAGACAGATGAAA
CAGATGAAGTTGATGTTGAAAGCGTTCCAAAGAAGAACCAAACGAAATAT
TGCTCAAATGAATACAGAAGAAAAGGATAGTCGAATGGTAATATCATCAA
CAACTAATCACAGGAAACTTTCAATAAAGTTCCAAAAGCTATGGCTTAAC
TAAAAAATGAATAGAAATGTGGCAAAGTTGCATTTTGTGCTGGGAAAAAA
ACATTTGCATTTTTTACAACTTGTTTTTTTTTTAAATTAAAAACCATAAT
TTACCAAGCAGTTTCAATGCTAACTAGTGAACTTTCTGGAATTCCAATCT
CAGTTTTTCCACTTTTTATCATCAACCTACCACAGATATCTTACATAAAA
CAATAAAAAGGGCTTCTTTATCTCTACTGAAATAAAGACACGAAGATGTA
CAATCAAGTGACTTTTAGATATCTGTGCACCGGTAATGAAGTTAGATTTC
AAATGAAAATCGCTGGATGAGTCTTTTTAGGAAAGCTTTCTTTGTTAACT
TTTTCAAGGGATCTTTTTGTTTTTCCATCATCAATGTAAAAGAGTGTTAT
GTAAATAAGGGAATAAATATATTTAGAGTGTTATTATATTAAGGCCGCTA
CCCACTCAGCATTTTATGGTCGGCGACCAAGGCGTACGGCTCAAGCACTT
TGGTCGCTAAACACTTTTCTCGTTCCACAAAACGACAGCCTTTGGAGGCT
TAATTTATGCAATAATGGCTTGATTTATGCGAAAATTAAGCCACGCGCCT
TGTTCGCCGACCATAAGATGCTGAGTGGGTAGCGGTCTTTACAAGTATGA
AGGTTAATCAAGAATTTTTCTTGATATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014428-exon-sc0000187-1575043694:264693..264828 | TCONS_00014428-exon-sc0000187-1575043694:264693..264828 | Clytia hemisphaerica | exon |
| TCONS_00014428-exon-sc0000187-1575043694:264256..264381 | TCONS_00014428-exon-sc0000187-1575043694:264256..264381 | Clytia hemisphaerica | exon |
| TCONS_00014428-exon-sc0000187-1575043694:262949..263810 | TCONS_00014428-exon-sc0000187-1575043694:262949..263810 | Clytia hemisphaerica | exon |
| TCONS_00014428-exon-sc0000187-1510915933:264693..264828 | TCONS_00014428-exon-sc0000187-1510915933:264693..264828 | Clytia hemisphaerica | exon |
| TCONS_00014428-exon-sc0000187-1510915933:264256..264381 | TCONS_00014428-exon-sc0000187-1510915933:264256..264381 | Clytia hemisphaerica | exon |
| TCONS_00014428-exon-sc0000187-1510915933:262949..263810 | TCONS_00014428-exon-sc0000187-1510915933:262949..263810 | Clytia hemisphaerica | exon |
| TCONS_00014428-exon-sc0000187-1491911889:264693..264828 | TCONS_00014428-exon-sc0000187-1491911889:264693..264828 | Clytia hemisphaerica | exon |
| TCONS_00014428-exon-sc0000187-1491911889:264256..264381 | TCONS_00014428-exon-sc0000187-1491911889:264256..264381 | Clytia hemisphaerica | exon |
| TCONS_00014428-exon-sc0000187-1491911889:262949..263810 | TCONS_00014428-exon-sc0000187-1491911889:262949..263810 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:262949..264828 - |
Blast
The following BLAST results are available for this feature:
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