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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014427 ID=TCONS_00014427|Name=TCONS_00014427|organism=Clytia hemisphaerica|type=transcript|length=879bp
agCAAGTAAAAAAACATACAGtgttaagtttttttaaaatagattttgta
TCCAAGTTTATCTTTTATTATATAATCATAANAAAAAACACAAGCAAGTA
AAAAAACATACAGtgttaagtttttttaaaatagattttgtaTCCAAGTT
TATCTTTTATTATATAATCATAAGTGCAAATGAGTTACAAAAATAATACA
ATTTTCAAGTTCATTATCCCATTCAATGAAGTCGTATCTCAACAAATAAG
ATCCTCCCTCGCTGAAATATAGTTCATAAACGGCTCTCGtatcaaaattt
ttacaaattcttATTTACGAATAGAGCTATTCAATTATAAGAAGTGCGTC
TAGTCTGTGAAACAATTTAATGTTTCTTTTGTGGGCAACATGGTGGTGGG
CATGATGGGACACATTGAGTGACACAGACAGCTGGGCAtggtggtggtgg
aggtggtggtggtggtggagcTGGTGGTCCGTTTGGTCCTGGTGGTCCTC
CTGGTCCTGGGGGTCCTGGTGGTCCGTTTGGTCCTCGGTTTCCTGGTGGT
CCGTTTGGTCCTGGTGCTCCTGGGGGTCCTGGTGGTCCAGCTGGGGCTCC
GGGTGGTCCGGCTGGTCCTGGGGCTCCGATTGGTCCTGGGCCTCCTGGTG
GGcctggtggtggtggtggagcTGGTGGAACTGGGATACAACATACGGGT
TGACAGGCTGGTGCACAGTATGATGGACATGGGGAAGCGCATGCGCTTGG
TGAACGTTTGTctgtaaaaacaaaataaagaattatgaatataagaaaat
atgtgaaaaagaaaataaagaaactttGGATCAATATTGAGAAATCATGA
TTTGATATGCTGAATGTGAGTCGAGTGAG Run BLAST on NCBI transcript from alignment at sc0000187:204152..205093- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014427 ID=TCONS_00014427|Name=TCONS_00014427|organism=Clytia hemisphaerica|type=transcript|length=942bp|location=Sequence derived from alignment at sc0000187:204152..205093- (Clytia hemisphaerica)
AGCAAGTAAAAAAACATACAGTGTTAAGTTTTTTTAAAATAGATTTTGTA
TCCAAGTTTATCTTTTATTATATAATCATAANAAAAAACACAAGCAAGTA
AAAAAACATACAGTGTTAAGTTTTTTTAAAATAGATTTTGTATCCAAGTT
TATCTTTTATTATATAATCATAAGTGCAAATGAGTTACAAAAATAATACA
ATTTTCAAGTTCATTATCCCATTCAATGAAGTCGTATCTCAACAAATAAG
ATCCTCCCTCGCTGAAATATAGTTCATAAACGGCTCTCGTATCAAAATTT
TTACAAATTCTTATTTACGAATAGAGCTATTCAATTATAAGAAGTGCGTC
TAGTCTGTGAAACAATTTAATGTTTCTTTTGTGGGCAACATGGTGGTGGG
CATGATGGGACACATTGAGTGACACAGACAGCTGGGCATGGTGGTGGTGG
AGGTGGTGGTGGTGGTGGAGCTGGTGGTCCGTTTGGTCCTGGTGGTCCTC
CTGGTCCTGGGGGTCCTGGTGGTCCGTTTGGTCCTCGGTTTCCTGGTGGT
CCGTTTGGTCCTGGTGCTCCTGGGGGTCCTGGTGGTCCAGCTGGGGCTCC
GGGTGGTCCGGCTGGTCCTGGGCCTCCTGGTGGTCCTGGGGGTCCTGGAG
GTCCTGGTGGTCCGTTAGGTCCGGCTGGTCCTGGGGCTCCGATTGGTCCT
GGGCCTCCTGGTGGGCCTGGTGGTGGTGGTGGAGCTGGTGGAACTGGGAT
ACAACATACGGGTTGACAGGCTGGTGCACAGTATGATGGACATGGGGAAG
CGCATGCGCTTGGTGAACGTTTGTCTGTAAAAACAAAATAAAGAATTATG
AATATAAGAAAATATGTGAAAAAGAAAATAAAGAAACTTTGGATCAATAT
TGAGAAATCATGATTTGATATGCTGAATGTGAGTCGAGTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014427-exon-sc0000187-1575043694:204489..205093 | TCONS_00014427-exon-sc0000187-1575043694:204489..205093 | Clytia hemisphaerica | exon |
| TCONS_00014427-exon-sc0000187-1575043694:204152..204425 | TCONS_00014427-exon-sc0000187-1575043694:204152..204425 | Clytia hemisphaerica | exon |
| TCONS_00014427-exon-sc0000187-1510915933:204489..205093 | TCONS_00014427-exon-sc0000187-1510915933:204489..205093 | Clytia hemisphaerica | exon |
| TCONS_00014427-exon-sc0000187-1510915933:204152..204425 | TCONS_00014427-exon-sc0000187-1510915933:204152..204425 | Clytia hemisphaerica | exon |
| TCONS_00014427-exon-sc0000187-1491911889:204489..205093 | TCONS_00014427-exon-sc0000187-1491911889:204489..205093 | Clytia hemisphaerica | exon |
| TCONS_00014427-exon-sc0000187-1491911889:204152..204425 | TCONS_00014427-exon-sc0000187-1491911889:204152..204425 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:204152..205093 - |
Blast
The following BLAST results are available for this feature:
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