|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014399 ID=TCONS_00014399|Name=TCONS_00014399|organism=Clytia hemisphaerica|type=transcript|length=1315bp
AGAGATAGCTGTGCATGCGCTGACTAAAAAGATAGTTGAAAAAGAGCATT
TTTATCTGGTATTTTTACAAGAAAAGGCACGTGAGAGTTCGACTtgattc
tattgttttatcagtATGTATTGTATCTGATTGATCAGTTTTAGtgtatt
ttgaccaaattttgaatCAAGAAATTTCTGTATACTGGTGTGATCGAGCT
GAGCTGTTGTAGTAGTTGAAAATGTTGTATAGCAATTGACACAGAAATAC
TTAAGcAATGGCCGACTTCAAGAACGACATTCTTAAAACACACAACACAT
ACCGTAAAACACATCGATCCAACCCTCTCAAATGGTCCAATAAGCTTCAA
GCCAACGCCCAAAGATGGGCGGATAAACTAGCAAAGAAGGGATATCTCCA
GCATGAAAACCAGTCAGATGAGGGAGAAAATATCGCTTGTATGAAGGGAG
CAGAGCTGACTGGTGAACGAGCTGCAACCATGTGGTACGATGAAGTCAAA
TATTATGATTACAGTAAACCAACATTCAGCTCCAAGACAGGACATTTTAC
ACAGCTTGTATGGAACGGATCAACTGAGCTTGGTGTAGGCCGCGCGACCG
CTTCAAACGGTATGCAATTTGTCGTCGCTCGATATAATCCACCCGGAAAC
ATCCTTGGAAAATTCCCAGACAACGTCTTTTCATCAAACGGTAAACCGCC
ACCAACGACGTCAAgcaacaatagcaacaataacCGGACGACAAGAAACA
AGCCTGAAAAACGGCAACAACAACCATCCAGTGATAAACAAAGTACGTAT
CTTGATGAAATATCTAAGGGGCtcataaaaatgaaagtcaAACCTACGGG
TGGACTAGCTCCACAGAAGCCAACCAGTTCCACACCTAGAAATGGATTAG
TGTTGCAACCACGGCAACCTGTTTCCGTTTCACTACCGACGACTGGTTTG
GTAGTTCACCAACAAAAAGCTACTACTTCCACTCCCGTACCAAAGGGTGG
ATTAATAGTTCATCAGTATACAACGACGACCGCTACTTCAGGCCCTAAAA
GCAGCCTAATGGCTCATCAGCGCCACGAAGCTGGTCCTATTTCTGTCACC
ATTAAGACAGAACGTAGAGAGGAGATAAGCTTCTTTCGAAGAATTTCACA
CGGGGGATAGAATGCTTTTACATTGTTTTTAATAGTTAGTTATTATATCC
AATGCGTTTCAAAGCGaaggctagaagcgaatcttcaatctttcccAATC
AAGAAAAAGCGGAGCCAATCTAgtactttattttgttttcgtttttaaca
tttttcaaaatttgc Run BLAST on NCBI transcript from alignment at sc0000187:426661..442531+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014399 ID=TCONS_00014399|Name=TCONS_00014399|organism=Clytia hemisphaerica|type=transcript|length=15871bp|location=Sequence derived from alignment at sc0000187:426661..442531+ (Clytia hemisphaerica)
AGAGATAGCTGTGCATGCGCTGACTAAAAAGATAGTTGAAAAAGAGCATT
TTTATCTGGTATTTTTACAAGAAAAGGCACGTGAGAGTTCGACTtgattc
tattgttttatcagtATGTATTGTATCTGATTGATCAGTTTTAGtgtatt
ttgaccaaattttgaatCAAGAAATTTCTGTATACTGGTGTGATCGAGCT
GAGCTGTTGTAGTAGTTGAAAATGTTGTATAGCAATTGACACAGAAATAC
TTAAGGTAAATATAACACAATCTGGCAGATCTAATAAAAATCTTGCATAC
CCAAATTTCACATTTTATCATAAGCGCTGCCTCATTCCGCTTGAAATATA
TTATGCACGACCCAAAGTATATACttcaaaaatctcgaaaatcCTGAATC
GAAGATCTATAAAACTCATTAACAAATTCTTATAAATCCCAATAACTTGC
TGCCCCTTCTCACTTTTGGGAGTCAGTATAGGTTAAAACACCAAGTGTGA
CGGCCGctggtctttgttttgatatggTTCAATTTCATGTTACGTCATTA
GTCACTTGGGATTGCATGTCTCTCATCGTCTTCAGTATAATTAGGTCATT
AGGGAATTGTAGAATGTGGAGGCGTAGGAATTGAATTGTAAAAGATTTTC
TACATTTATGTAACAGTAGTAAGGTTGTGTATGTGATGCAATTTGTGGAG
TGTTTGTTTTGGTGTcgtggaaaacttttttaattagtATCTATTTTCTA
ATGTGTTTGCTTGTATAGCCCGGTATAGCCTTAGGTTCAGATAGCTTTAG
GATAAAGTTTTTTTCGTTTGTTTATATTCTAAgagtttgtattttttgtg
ttttagcGTTTGGAATAGCAATCCAAACAGTAGAAAATATCGCACACCTT
TTTGTATCCTCCCAACGTCCCCTgtgggggggtttcatggttggcggagg
agcggaatgggcccttttttcggacggagtggcggaatttggcgaagatt
tagacggaattacggaaagtggggtctctgacggagacggaaaattagac
aattttagtgcggaaaaacggaatttagtaAAATGTTTGCGGAATTTccg
aattggtaaaagatattcaaaatttgcggaattttcgacaaaaatattga
atttcaaaggaattttcggtgacggaattttggttcaatttaagacggtt
tgacggAAATTGGAGAAAAAATTGGCGGTATTGCGGAATCGGGTACCCCC
TTAAACCCCCCCCCCCTGTGGCCGTTCTAATTTCGTATTTAACCAGTTTG
CAAAAActgcaatcatggtcgaaatctattgggAATCAAGCTTATTTCct
agtttttcgaaatttggagttcgggcgagaaagtcgattttggaccatct
ctcaaatttaataggatatttcaattttgctCGGGTTAGACCCCAAGGCT
TAGGCCATTTTTAACATTTGGATCCTTGGATCCTATgttcctaagtctta
agtctcatgttgaaactcagagttaaaactctactcttccaaactacttt
agagcacttaacAAATCGaatgtggtttcaaaacttcccggtggatttcc
cttttttctcaaatataacGACTATGATTGTGGTCTCGCTTCTCGTATCC
AATTGAATCTCTATTGACTCGATTGCGTATCGTATTTAGTCGATTCCGGC
CAAATCGATCTCGTATcttcaaaatcatcaaatgttGTGGTGAATTGATT
TGAACTCGTATCGATCTAATCAAATTAACTCGAAATAACTCGAACGAAAA
TAACGAAGCTCTGCATGGAGACAACAGATAacaacactagatagagctac
tttgtattttccaagcaaCTGTAGGTGAAAcaaaataatccgccatcttt
gctgaaagtagatCGCAGTTCGATATCGGCAAATTGTtcaaccaagcaaa
aaaaaacataatggcGCGAAGCGACGAGGCAAAAGATTGGCTTGATCGAT
CGAATTGCTGGTaccgaactatggtctactACTCGATTATTTCAACTCAA
ATAGGAacggagtagctctatctagacACCTTAAGGTTTCTAAATATATA
GAGAGTAAAATATTGTACGCACGATTTTGACCTCTACACGCTTATTACCT
AAATCTTTTTAACGATATCTGGCATAAAGCAATACGGTGGAGAACGCAAG
GAAGAGTAAACCCATAACATTTCACACTTCCTTAAAACGAATATCAATCC
TGCTGGTCGCTCCATCGTTGTGAAAGATTTTCAGTTTTCTATGGTATCCA
GCTAAGTTAGAGTCTGGGGATAGTCTGATCGGAAATGTTCTAAGGAAGTT
TATCATCAATACACATGCTAAGATATTTGTCTTTAATCTGAATTGAGAGA
ATCTGATATCCCGTTCCTGGACTCTGGTAAATTATTGATACTTATTATGT
AACTGCAAGGTGCATTCATTTCAAACGCATACCGAAATCAACTATTGTTT
TCCAAAGAAACTTTTGGTTCTGTGactacagcacctgaccccgagaatgt
aggtgaaaattGAATCAGACCTGggagatgtagatttgcatttaaaaaaa
tattgaatagtttaaacgaaattttgaactcccaaaatcctttcccaggg
gttagtttcattacttttgatagataggcaatttttttggtccttgaagt
tgactcccattttcgttataacccccagaatgtaggtttggttttatggc
tttcaatctagtaatagtaaaatgttgatattttttcgattgaattaatt
ataacaggaaattttagaaatattttatgccaaaaaaatattctaaagag
cttttgttattctgaaaattggattttttcgctttttaacccccagaacg
taggtgaaaagattcggttgctgagatcgaaatttcagtattcatcggaa
atttttgttctctaagtgaaattcatactttagaaatatactctgacaaa
aaattaacaaagatattaattttatcgtgctacaaatgatgaaaagtaaa
agaaaggacaaaaagaagagacaagaaagttgtttttattttgtaggttg
aagatTCTCTGTTaaaatgtaacaacacccctgcctcacagccccggtgg
aacttttccaACATCGGGtcaaaaatttctactaaattcccaatggggat
agaaattctattgttccaaacttaggcaaattttctgattgggctggggt
cccatCGGGTCTGGGACACGTTGTAAATGCTTGAAAtgccaaaattaatc
atctctcaggtaatactttcatgttatgaaagtacaacaaaaaagtttta
tataatttgacagactttttatgtcgggttatgaaggctcccaaattgta
ggtcaactaaccccaaaaggtaggtcaaacattttcgttgaaatatctaa
cttagaacaataaatattgaaatggactattttccacatttccttagttc
atcaggaataagaaaataccctatcatgataacttaattccaatagattt
tgatttagagaggatttatttaaaaaatgtctcaattcgagaagtatcca
atcaacttcgattcagattttcgcCTGTTAAAACTTCATGTCTAGAAATA
ATCAGTAATATGTAACGTTTtgctctgaaacaactttttattctcggggt
ttactacattctcggggtcaggtgctgtacaatattggtcaaaatatatt
gagaattttggttaattccccgtttttagcattttaaagtTCGGGTGAGA
AAGAAGCTTTTGGGCTATTTATTAGATCTactcgaatatttcaatttggg
tggggtttatagacttccaggcaaTATTCTGAGCCCTAATTGGGccgttc
ttgaacttttggatcctcagatctcAGAGTATCATGTTAAAACTctgagt
taaaactctacccttccaaactaagttagagcacttccaaatcgattgtg
gctataagatttagtgagaattttcttttttggacctaccccggtggggt
ggaggtcctataaattaacccatgttcgttagttagttagttaccagctt
ttctcgagattggctcattagttNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNcggagcccgattttcgaaaaaaaaatc
ttttgggcaaatttgggccaaaacggcttaaaaacgggttttttggactt
tgtgaaaaattggatcatttatttttctgatttttagcatgaaagtaggg
tacaatcatagctaaaagatggctcaagcagatttttgcaaaaaaatttt
tttggctcaaaaattgcatttttatctataagaaaccacttttaataaga
atacatcaatgttcttagccatattattattattatttttattagttttt
ttaagatgaaaatgtcacggtggagggtaatgatttgagttttctagaaa
cacttattatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNgaaaccttatttattaagctgtgcatttttctgatagtgg
tttttacaaagaaaagcgcttaatagcttttttatttctttttcaaaaat
ctttttcaacagTGTCGATAGTTTCTTTCAATAGatatatgctttcattt
tctttatttttttgtgtattttgacccagttatgtcttatgtgtttcatt
gtttcaatgttcactgattagtttgataaccaggtaggtccataaaagta
tcgcttgtttttcaaacattatgGCCGGTATTGTAGACCCCTCTTTACCA
CACCAAAAATATTACACGAAAAAAGGTGAGTGTAGGAGAAATATTTCGAC
AAGAGAGATtaaaaatgagtttttcaaaCCCTCTTTAGTTTCACTTCCTA
TCCTAAAGTTTGTGTTATAAAGGTGTACAGTGTTTTTATTTATGGCCATA
ACTTTTCAGCTAGTTGTCGTGTATactaaaaaaagttggtatggTTTGAA
AGATATTTGAATGCGCtgatatttcaactttttggcTACGTTTTATAGAA
AGGTGCTACCAAATGATTTTTACGTCAATCGAAAGCTGAATCTAAAACTT
TGAACTACATcgattttaaataattttcatttctttgagATAAATGAGTT
CCATTTCTTCTGTCATTTACATAGATCTGGACTTTTTTTCTGAAGAATGT
AACTTTTgtactactttaggcgtacaaactttaaggagcagaaactttcg
cgattttcgcaaatttttttgtcaaaatcgcgaaagtaaatgtagtagat
ttcgcgatttttctacctcgcgaaagtttctgcttgcaaaagtttgtaca
cctaaagtaGTTAGAAAATTATTTGACCCACGATGAAAAATATGTGTTAC
CTATTGATTTAATATTCTGAAAGAATCTCTAGAATCTAGGACATCCTGCA
TGGAAAACAAATTCATTTGAATCTAATGACGTAAGTACGTGATGACATTT
AAAACGACCAGTATTCTATGTTTGACATGTTGTCCCAAATGTTGATTTCA
ATTCAATGAATGGGTTAAGAAGGTGCTGACAAGCCGCCCATGGGCGCCAT
GTATTAATTTCGATTCCGTGcacatttttttatgattttgattttcattt
tgaatcaaagTGTGATATTATGCGATTTTAATTTTGTTATGAAACTTCAA
AtggaaaacattatttttgccACTCGTATCCTAGATTTTGCCATTTTACA
TTTGGTTTTTACATTGATATTGTTTTTACATTGATATATTTGAAGTTTGA
AGCAAAGGCTTTTCTTGGTTGTAAGATTCGATTTGAAGgaatttttcttt
gcaaaaatcTCAATCCTCGGTTACAGGTACATCACCAtatattattttga
agaatttacTGTAAGATTTCACTTGAACGTTTCCTAGGTAGATTTCTTTC
AatataaatttatttaaaaaattattttacccTGTTTTACCTAATCATTG
CTAAGGTAATTCTAATTTTCTAAAGTAAGGCGATTGGCATTGAGCAGGTA
AAGATTCTATAGTATCCCAGCctacacacaacgttgtttcaacgttcatt
aaACGTTccttatatggacgttgtgaacgttagataaacgttgaaacaac
gttgtgtgccagctggaatATGTTTTTCAAAGGCAATAAACTGAGAATTC
TTTATACAAATTTTCCAAAGATAGTCAGggttttggatttcattttaCGT
TTTTCTGCGGAAATTCAATGTTTTCCTACGTATTGTACGTACTCAACTGT
TGAAAAAGTTGGAAAGAAACTTTTTGCAGACTGAGCAGTTTTTGAAGTGT
CTGATATACAAAGCCAATGAAAAATTGACGTAAATTATCGATAACTGGAT
TTAAGTGCGTGTCGAAATTCatgtgtttttgatttttcatcaaatttgca
ATCGCTGGAAAATCAATAGGCTATAAGGTTCAgctcaacctcgttccctg
tattatcagcttttttatgcttaatgatagtgctagataataccctggct
tTGTCTGATTACGTAATCCAaactctggcgtcaatcagtaacgtaaataa
aaccTGGGGTACATGGGAACGAGGCTGGGCTCAGCTTTGTTTGATCATNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtta
tatggacgttgtgaacgttagataaacgttgaaacaacgttgtgtgccag
ctggaatATGTTTTTCAAAGGCAATAAACTGAGAATTCTTTATACAAATT
TTCCAAAGATAGTCAGggttttggatttcattttaCGTTTTTCTGCGGAA
ATTCAATGTTTTCCTACGTATTGTACGTACTCAACTGTTGAAAAAGTTGG
AAAGAAACTTTTTGCAGACTGAGCAGTTTTTGAAGTGTCTGATATACAAA
GCCAATGAAAAATTGACGTAAATTATCGATAACTGGATTTAAGTGCGTGT
CGAAATTCatgtgtttttgatttttcatcaaatttgcaATCGCTGGAAAA
TCAATAGGCTATAAGGTTCAgctcaacctcgttccctgtattatcagctt
ttttatgcttaatgatagtgctagataataccctggcttTGTCTGATTAC
GTAATCCAaactctggcgtcaatcagtaacgtaaataaaaccTGGGGTAC
ACGGGAACGAGGCTTGGCTCAGCTTTGTTTgatcatgaaggtaataaaaa
tagatggagagtcaatgccttttgttctattctgacatatcatcggaagc
aaacagttgttttgttgctttgggaataggATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNtagatcattttgtcagagtatgaaaaccgctgcccacttcgacgt
gaagattttaagacaggaaactttcaaagaaaatgtgatGAAACTGTCAA
TGTTCAAAAAATGTCGGCCCAAAAATAAGTCCTTCTGAAATTAATACATT
CTTTTATCTTTACAACGGTTGAAACTACTTCGAATCTTATTTTAACAAGG
ATTTCtcgtaaaattaagtttttcaaaatcaacgcaacagcctctttctg
ttctttAAAGTTGTAAATTGATGCTTTTTGCTTCCGATGATGGTAAATCA
AAGGAAAGCcgttttgaatagatttataaaagatctGAACGACCATTTAG
ATCATTTACGCGacattttctctccatctatttcTTTAATACCTTCGTGG
TTTGATTGACCGACTAGTATCGATCTTCATATTCCAGTAAAAGTAAGATC
ATATCTGATAACTGTCAACGTGAGTTGCTGTTCAGTTCAAAAGGTTTATG
TTATGTTAAGGAGGCAAATTGGGGTTTTCCAgaacaaatttgaatatggg
agcgtggaggatataacattttttttgaaatttacccccggacatcATGA
CTTTTGAAACAGAAAAATTACTACCAAACAGAGCAATTTTACCCTCCGGA
CAAGAcaaatttgtagatttttcactaccccctgACACTATATGCTCCAC
TCCCCATGAACGGACATCTTCTGGAAGAGCTCATTGCCACCCAGCTTCCT
TAAAATGTAATATCGTATATAAAATTGCGACTTATACAAAGAACCAGTCG
GACCACTTTCCCAACGGAGAATTTGGCCAAAATGTTGTCCCCTGTGAGAA
AAACAACCTACAATTTCAGCTACTAAAGTTTTTATATCCGTTGAACTTTT
GATAACAAATAATTACGACTGTGAGAAAAGGTTCCGCCGGAGTTTTTTAA
GACATAGGTGTAAGGTTGATCTAAAATTCGTTAACTAAAGAATAAGGTCA
TCTTTCCCCCCGGAATAACTTTTAGACTTCGTTTAATTACATACTGATCA
AGGAGCTGCCATTTCCAACTTTCTAACGAGAAAAGCTCGACTACATATTT
AATCAAGAAATTCAAGGaattattttgatcatttttgatTATTAATTACT
GTGGCATGAATTATAAGTGTAATTGATATATTAGTGCATTTTGATGTTGA
TTGCTTACTTACGTATCTGAAATAGACAAGTTCACTGGAATAAAATTCCG
TAAAGAATATAGTTGACGCCGATCTCTTATCCGACTTTATACTATTCGAT
GCGCTCCATTGTCcagtaaaattgaaaatcaacatCAGCAAGAACTTCTC
ATGAACGATGGTCTACTATTTGATCAAACTCCCATTTCCCTTGAAAATAG
AATAGGGGACATCAACACTAAAGTGCTGTAGAAACAGCTAATACCAAACA
ATCTCTTCGTGACTGCTGCAACAGGTCTATTCATTTGGCATAGCACATTT
AATCTACAGGACTTGAATGTATAAATTTCAGAATGTGTTGAGAATAGCGA
AGATGAAGAGATCAAGCTAGATTAATTAGACTTTAATCCGACGAGTATAA
AAGATTTGAAGTCCCCCTCGAAAGTAAAGTCATTCANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCAAAACAAACCCCGATTGTTTCTTATCGGAAAT
TTCACGCTGATTCCGATTTTTTAATCGGTTTTACCGTACCTCTGACGGTT
GGGGCGTAATCTGATCAAATATAAAGGTCACCttaaaaacgtatatatac
gtccTTAGGAACGTATCAAAGACGTATATGTACGTCCTTAGGAGCGAAAA
GGTTAaattgttcttgatattttggccattgaagcttTATGGTTTTTAAT
AGTTTGATCTTATAAGAAAACGCATATATGAATTTTATGGACGTCCGATA
GACGTTATTTTAACGTTCTGTGTGCCGGTTGGGATAAAAAACTTCTCCTT
ACAATAATCCTAATGGGTCATATTTGTTCGTACAGAAAGTTTTGGTATGG
ACCTTCATGTACTGACTGACTTACAGAGGATAATCCTTTTTATGATTCGA
TGCCAAAATGTTTACATCATTTTTCTCTTGTGATGTTGACCTCGTCATGT
TTTTGTTAACCTGCTAATCCAACCCCCTTTCATTTGGCAATAAGAAAATT
CTTCTTGAGATATCTACTACTtacccagttggcacacaaagttgtttcaa
cgtttaaatAACGTCCACAACGTCGATATAACGtcaaatgaacgttgaaa
caacgttgtgtgtcagctgggtataCAACCCTTAATAAACTGATACTAGC
TTTGCCGTCTATATTACCAATAGTACCTTACTATATTACTATAGTACCAA
TCAATATGTTGCTTATCGGTGTTCCTAGTCTAAATCGCATACCACTGTAG
ATATACTATGAAAAACTAGTTTCGATGGAGGATGAGTAGAAGCCTATGGC
GTTCCAACCAATGAATATTGAAATATTCACCATTCTCATTTTTTCTTACA
AATAATTATGTTGGAATGAGGATAAATTGTATATTTTGTGTATGTATATT
CGTTAATTGATTTGTTATTTTTGCGGTCAGCTTTTTAAATGAACCAcgtc
atttttaaacaaaaagtcACAAGATAGTCGtttaaaaagttgaagaaaaa
tgCTAAGCAAGTGAAATATCAATATCTCAAGTACATGCACCTTGTCAATT
TTCGAAGCAACTCTATGGCGTCATTTTTGTAATGGCCTTTCAATTTGTTT
CGTTCGCCGCGCTCTTACATAACTGTTTGTGCTGACTTCAGAAGGAAAGA
GTATAAAATGCAAGACTATGGTGGAAGTCGATCAGTTTCATAAAGTAGTC
TAAAGAAATCATTCATTGAAGAAACAGTTTTAATTATATTAGGTCGTTGA
AATTCTTTAAACATGGATGCTAAGCAAAGTAAGTATTTGATTTTAGCCGA
TTTGAAAAAAAGGAACCcgtttctttctgtttttttcAGGGTATGGTATA
TTGGTCTCATTTAGTATCTGTCCATTATCCGACGCACGAAACTATAGAAT
TCTTTAGGATTTGGTCAACGATAGCTAGATTCAAACCATTCGTTCgttca
aaagaaaaaggctGCTGTTTAGGGATGTTTGAAATATGATGAAATCTTTC
GCTGTTGGAGCTCTCATAGATGGCTGTAAAGtttgtaaaaatgtaaaaag
aacATTCTAGAAAACTCCAAGCTTGCTGTTTCTACTTTGTATAGATTATT
GATGACGTTTTTGAACAGATATTCAAGATCGTGCTATTTTGCGGGGTCAA
AGTAATTAGGATTTTTTTGCGGTACAAATTTTCCTGTTTCAGCAATAAAC
CTACGCCTTAAATTCACAGAGACCTTTTTTATGTTACGCTTAAAAAGTAT
TGACTCATATGTATTCAATATTAGCTtgtttttcaattaaaatttctttt
gatttctgTCTTGACTACCAAAACTAAAGTTTTGTCCAAAACCCGTTTAT
CTTGGTTGGACATATTCTGTGTTGGTTGATATCCCGGAATAAAAGATTTG
TTTTGATGGAAAGTTTCAAAGAATGCGGAAATTTTCATATTGAAgtcaat
tttcttttcccaATCTAATTTCTACTGACTAATGTTTTTTTGATATAcgt
aatattttgaatattactTTCGACTGTACTAATTCACTCCAAACTTTTAT
ATGCATATCACAACTCATTGACGTGCagaattttttctttcctttctacA
ATGCGTAGTATCCAGTAACATACTTCGAGCCTTTACGACTTAACAATAAC
CTTAGTATCGACCAATAGTATAAGTCCGGTGCTGGTTATTAATTCAATTT
TGCACAGTATGGAACCCGTTACTTTTGAAAATCTCTGAATGACGCATTAG
CCTGTACGTGCCTCTGGAAGAAAAAAGCTCAAAAGCTATTTTcctatttc
aaatttcaaaatgacgTGTTATATGTAGGTGTATAAATCCTATAAAACCT
CTAGAAAATCCTTAAGAAGGCCATAAAGTACCAAATATTTGATTAAGACA
TACAAGTGATTTTGAAAGGATTTTTGTTCAGGTAGGTTTATATTAGGATT
ACTAAGGACTTAAAATTGTGACAAGTAAAAGGGGTTTTTAAATATTGCTG
GGAAAATTCGAGATTTGAGTGGTATTGAGAGAAATAATGGAACGATATGA
TTGTTGGATAATTCCACGACTTGTATATCATTTTCGTTTGATCCTCTATA
TATCATtatcaagaaaaattgaagtGAAAGTACCTAGCCACGATAGAATT
ATTAGagtttttgaatatattttgcaTTGCATGGTGAAGAAAAATGCAAA
TGTGTTTTGATCCGGAGATTATGAAATGACATAGGGAGCACCTTGcgttt
ttgaatttgattttctttttggatCTAATCAATATTCTTCTTTGTTAAca
tattgacaatttttttttattgtagcAATGGCCGACTTCAAGAACGACAT
TCTTAAAACACACAACACATACCGTAAAACACATCGATCCAACCCTCTCA
AATGGTCCAATAAGCTTCAAGCCAACGCCCAAAGATGGGCGGATAAACTA
GCAAAGAAGGGATATCTCCAGCATGAAAACCAGTCAGATGAGGGAGAAAA
TATCGCTTGTATGAAGGGAGCAGAGCTGACTGGTGAACGAGCTGCAACCA
TGTGGTACGATGAAGTCAAATATTATGATTACAGTAAACCAACATTCAGC
TCCAAGACAGGACATTTTACACAGGTATGCAGATTTTCATTTCTCTAATT
ACAAGCACGACGTACCGGGTACGGCAGTCCGTCGGCCaccgtaccagatt
ttcacgaaaaatcCTAAAATTATCCTCTTCTGTCGGAAAAATCGCTTAAA
CTCCTCATTCTCCGTACCAGATTTAAAAAGCTTCCGTTGTGCCTGCTAAT
TATAATattcatgaaaatattttcataagcCATAAGAAAAGAGGACCAAA
TGTCGCTTCCAGATATATTTTTACCCAAAATTATAATTTTGGCTTGTACT
GTTTGTGTCACTTTTAAACCTTTTGGGGAGAAAGTTGACAGAGTCCAAGT
TTCTCTGAGTACGACATTGCTGTTAAAAATATACCTATCCTAGTTCCTGA
GATTTCTGACAGATCTTAAGCAGTGGAAATATTGTAATATTCTTTTTCTG
CTCTATCTAGCTTGTATGGAACGGATCAACTGAGCTTGGTGTAGGCCGCG
CGACCGCTTCAAACGGTATGCAATTTGTCGTCGCTCGATATAATCCACCC
GGAAACATCCTTGGAAAATTCCCAGACAACGTCTTTTCATCAAACGGTAA
ACCGCCACCAACGACGTCAAgcaacaatagcaacaataacCGGACGACAA
GAAACAAGCCTGAAAAACGGCAACAACAACCATCCAGTGATAAACAAAGT
ACGTATCTTGATGAAATATCTAAGGGGCtcataaaaatgaaagtcaAACC
TACGGGTGGACTAGCTCCACAGAAGCCAACCAGTTCCACACCTAGAAATG
GATTAGTGTTGCAACCACGGCAACCTGTTTCCGTTTCACTACCGACGACT
GGTTTGGTAGTTCACCAACAAAAAGCTACTACTTCCACTCCCGTACCAAA
GGGTGGATTAATAGTTCATCAGTATACAACGACGACCGCTACTTCAGGCC
CTAAAAGCAGCCTAATGGCTCATCAGCGCCACGAAGCTGGTCCTATTTCT
GTCACCATTAAGACAGAACGTAGAGAGGAGATAAGCTTCTTTCGAAGAAT
TTCACACGGGGGATAGAATGCTTTTACATTGTTTTTAATAGTTAGTTATT
ATATCCAATGCGTTTCAAAGCGaaggctagaagcgaatcttcaatctttc
ccAATCAAGAAAAAGCGGAGCCAATCTAgtactttattttgttttcgttt
ttaacatttttcaaaatttgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014399-exon-sc0000187-1491911889:426661..426915 | TCONS_00014399-exon-sc0000187-1491911889:426661..426915 | Clytia hemisphaerica | exon |
| TCONS_00014399-exon-sc0000187-1510915933:426661..426915 | TCONS_00014399-exon-sc0000187-1510915933:426661..426915 | Clytia hemisphaerica | exon |
| TCONS_00014399-exon-sc0000187-1575043694:426661..426915 | TCONS_00014399-exon-sc0000187-1575043694:426661..426915 | Clytia hemisphaerica | exon |
| TCONS_00014399-exon-sc0000187-1491911889:441036..441334 | TCONS_00014399-exon-sc0000187-1491911889:441036..441334 | Clytia hemisphaerica | exon |
| TCONS_00014399-exon-sc0000187-1510915933:441036..441334 | TCONS_00014399-exon-sc0000187-1510915933:441036..441334 | Clytia hemisphaerica | exon |
| TCONS_00014399-exon-sc0000187-1575043694:441036..441334 | TCONS_00014399-exon-sc0000187-1575043694:441036..441334 | Clytia hemisphaerica | exon |
| TCONS_00014399-exon-sc0000187-1491911889:441771..442531 | TCONS_00014399-exon-sc0000187-1491911889:441771..442531 | Clytia hemisphaerica | exon |
| TCONS_00014399-exon-sc0000187-1510915933:441771..442531 | TCONS_00014399-exon-sc0000187-1510915933:441771..442531 | Clytia hemisphaerica | exon |
| TCONS_00014399-exon-sc0000187-1575043694:441771..442531 | TCONS_00014399-exon-sc0000187-1575043694:441771..442531 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:426661..442531 + |
Blast
BLAST of TCONS_00014399 vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 2.221e-32 Identity = 63/147 (42.86%), Postives = 90/147 (61.22%), Query Frame = 3
Query: 255 AMADFKNDILKTHNTYRKTHRSNPLKWSNKLQANAQRWADKLAKKGYLQHENQSDEG---ENIACMKGAELTGERAATMWYDEVKYYDYSKPTFSSKTGHFTQLVWNGSTELGVGRATASNGMQFVVARYNPPGNIL--GKFPDNVF 680
A F N++LK HN YR+ H PLK L AQ++++ LA L+H +S G EN+A + TG+ A WY E+K Y++ +P F+S TGHFT +VW + ++GVG+A+AS+G FVVARY P GN++ G F +NV
Sbjct: 5 ASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLA-WASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVL 150
The following BLAST results are available for this feature:
|
