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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014360 ID=TCONS_00014360|Name=TCONS_00014360|organism=Clytia hemisphaerica|type=transcript|length=1311bp
CAAATTTTGaaaaaagaataaaataatgGAAGAAGGGACTGAAAATGAGA
ATAATGAGGTTGAACCACCTGCTGGTCTTGTGTTTACAAATATAATTCCA
TCGACATTCACCATCATTGataaaagtgaaagtagtggGTACCAAGTTCT
TGAGACCGCACCCGCCCAAGAACAATACACAAGAGTTGAAAAGCGAAAAC
GTTGTGGTTATGCCAAACGAAGGACTTATTTCTCGACAGAGTTAACAGCA
AAGAAACTTAGAGTATTATCAAATAATGGAATAGCTGATGAActacaaaa
attttttgataaatatccAAGAGCAAAGGATTATGTGAATTTGTCTGATG
ATAAGAAACGATCTGCTTTGCATTTTGCAGCATCTAGAGGTGCGGATGAA
TTGGTTCACTTGCTGCTACAGCAAGGAGCTGACCCAAACGCACAAGACTG
TAATGGAAATACACCCTTACATTTAGCAGCTTGTACTCACCATATTCGAG
TTATAACATTATTATTGAGGTTTGGAGGAGATGTTAAAATGACAGATTTA
TCTGGAAAAACACCATTACATTTATCTCATTCGCGTTTAAAGATGCTTTC
TAGAGAGCGCAATGTAGATAGTAAAAAGTTTTCAGCCTACACAATGGAAA
AAAGGAAAGCGGAGGTTTTGGAAATAATTTCAATGTTGACGGAATATTTT
GATAAGTGTGGACAGAAAGAAGATTATTTTAAAATGTGTGAAATGAAAAC
GCAATTGCTAGCTGTTCAAACAGAACAAGGGGTTGATGAAGTCAACAATT
TGCTTTCCAGTTTTACTCAAATGAACATTGACGCATCATCAAACAAACCG
TGATAGTCATTTGGTTAACTCTTAAAATCAATTGCATAGGTTTCTAGATA
TTTGTTAAGCTACAGAATATATATAAATCCTTAACCCTAATCGTAAtagg
gggctgtttctgttcggagaTGAAACTATtgttaatagctcctgaaataa
tcgAGCTTTTggaatgaaattttctgtaaattactaacttttttatttag
cttcaagaTTAAGAGATGATACAGGATCAGCCCCCCTTATtatgaaccgc
ccctaaaagcctagtatgaataaaATAGGGTTAAATTCTGGAGGTTTTAA
GTTACTTACTTACGTTTTTATACACATCTATATTTTGTATCAGTCTATTT
TGTAAGCTATTTAATTAATGACAACTTATGTAGTACGTCCTTTATTGTTT
CCTCTTTACttgttttctaattttctaataCAGAACTTGGTATGGAGAAA
GTTTATCACTG Run BLAST on NCBI protein sequence of TCONS_00014360-protein >TCONS_00014360-protein ID=TCONS_00014360-protein|Name=TCONS_00014360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=275bp
MEEGTENENNEVEPPAGLVFTNIIPSTFTIIDKSESSGYQVLETAPAQEQ
YTRVEKRKRCGYAKRRTYFSTELTAKKLRVLSNNGIADELQKFFDKYPRA
KDYVNLSDDKKRSALHFAASRGADELVHLLLQQGADPNAQDCNGNTPLHL
AACTHHIRVITLLLRFGGDVKMTDLSGKTPLHLSHSRLKMLSRERNVDSK
KFSAYTMEKRKAEVLEIISMLTEYFDKCGQKEDYFKMCEMKTQLLAVQTE
QGVDEVNNLLSSFTQMNIDASSNKP Run BLAST on NCBI transcript from alignment at sc0000187:40093..52291+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014360 ID=TCONS_00014360|Name=TCONS_00014360|organism=Clytia hemisphaerica|type=transcript|length=12199bp|location=Sequence derived from alignment at sc0000187:40093..52291+ (Clytia hemisphaerica)
CAAATTTTGGTAAGTGTTTTATCTGAATTTTTAGTTGTAGTCTTTCACCA
CATGTTCacctaaaaaaaattgacagtcTGCACATTTTGATACATTGCTC
TTGATTGTTTGACAATGCAATGGGAGGGTTAATGCTGATCTCAGAGTTTT
CNACTTTATGGAGTCTTTGTGGGAGGGTTAATGCTGATCTCAGAGTTTTA
GTCAGCTTAatgccaacaaaatttctttgaatgctagcaaaactgagttt
gttatttttcgttCCCCTTGGAGACAGATGGACTGTATTCCAAGAATTAA
GCTTTGCAGGAAAATTATATCACCAAGTAAGAGTGTGAAGTATTTGGGTG
TTCACCTTGCTTGACAATCATCTAAACTGGAAGATTCCTACTTCTTTCGT
TGCTGCTACATTGAGAAGGGCAAAGGGGGCAATATCCAAACTTCGTCACT
ATCTTCCAATTCACAtccttctaaacatttatcatgcaatttttgcttCT
CATAATGTTCGCTATGCTAGTCAACTCTGGGGACTGTGTGACAATATACT
GTCACACATAGAATTCTTACTCTTCAAAACACTGCACTAAGACTCATGAC
CTTTAGTGAGATAAGAACTTCTGTCACTCCCCTGTTTGCTGAgcttaaat
tactcaaaatctttgatcaggtgaaagtaatgaatatcttatttattcaa
aaatacctccagggtaatcttccatctgatgtcctatcaacacttaattt
tgatgaaattgatcacaaaactggcatcagcgtagcgactccagaagtca
tgcaactttcgttgacgtcaaaccaaatgtttcatttttccgtgaacttt
gattttgaaccctttgcacttttttctatgtatgctaaagcgttccggtt
tttactaaatgaaatcccgtgatcttagctttccagcggtataaaacact
gtggacacgggctaggcggcaaattggtaaaatgccgaacgttttgcaac
attttgaaaattgtttgccgacgggagaaaaaaaatttgcaactatcgaa
gaacaaatgtgtctggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNaaactttgtatgtttatcagaaaa
agggtgaggaattcaaaaatcacaattgctaattctagttctttcatttt
catgtagtttttttaacttttttgcttcttatagcatgggaatgtcccaa
aaaaagtttttatttctgctgaaatggattttcttttcatttggggtttc
tcctttcagaaaaacttattctatactcataagtttttgttcctccattt
ccagaggccccttgaaaatgggtcctaccaccttttttgactcatttcaa
ccttttccaagctattttcttcaaaaacaaaaataaaacaatgcaatgtc
ttcttttttcaaaaaaagatatatctttcgttattttgataaatatacta
aatattttacaaatattttaatataataatattctagcaccatcaaagaa
ttctccctccaaatttcaggtctctagctacattagaaaaagagatatgc
aaaatttaagaagcatgactggaaaatttcttttttttcttttttgacac
atttttcaaatttttccaagctattttcctaaccttttttttgacatttt
tagccaaatttttgacactaaaatttgaatatctttgcaaccactaatcc
tctggaggcctatgacccctcattttctttctttttcaaagctctacaag
ataggatagattttgaaaaaaaaattaaaacttgaaaaatcttctggagt
tgctacaccaggggcaaagctattaaactactaaaactttcaacggtcaa
aaccacaaattttggacttaactctttctctcgtctttcgtctttcgtca
aaacaatggaatgagttactaataaatcatcctgacactgattttcacaa
ccttgatgctgatgaactaaaatctttagctacaaaattctatttagaca
aatacaaagctgaagacgaataatcttttctttttgtgtATGTGTGTGTG
TGCGTGTATTGTGTGTGCGTGAACCtagtgtgttttcccagggtgggagg
ggTTGGGTGGTGTAACAGGAAGAATTTTATAGATAAAACTACTCAAAGAA
ATTGTcataaaatgaaagtaaaaatatttcttatattcattattttgtgt
cGCTATTGatattatgataatcgtttattcattttttctttagttctgta
ataatttttcagtttcttctaggttccccattgtaatgtattagagaaat
ctatttttttatgtaaggggttatcctgctgtattgcagcgaaaatatat
tcaattcaattcaattcaatgggaacaaatcttgagaaaaatgaACGGCA
CACTGTTGTTTGTTGTGGATGGGACAAAAAATTTTCACTCATAATCgtct
aagcttaaactcctaccgtgagatcaggtaacttgcatcagtggaggcta
acatgcatagccctcaaatggaTGACATGGCTGGTCCTTAGGCGggcatc
gaaaaaatgctctgtttgCGTCGTAAGGGGTGTAAAAAATGCATGTGGGT
GGACCGGCGGTCGGAAAAATTCCCGGGGATTTTTAAATTATGCCAGTAAT
TCGGGGGCCAGTGGTGACGcgaacaaaacaatttttcgatggccgtcAGA
GCGAttaagaaaaaagctatactttaaatgaacaaattgcttttcctgga
tttttttccgcttctccgcaccggaaaatccgcaaaaaatatgatgcggg
cgggtgacgcaaatagaacaatttttcgatggccgcctTAAGGGGACCca
tccatattcatttgacaacgcataacgtcaaattgacgttatcttcataa
ataatgacgtcataatcacgttttcttaaaaaaactcaattcTGCtgcta
gaaaaaaattaagttaatttcgcctttccatccggaatttcttaatccaa
aaagaaatatttacagaacaacaaaagccttttagaaatttgttcttaaa
ggcattgcatattctgttttcatgccattaaaaaattccaccaagacgga
gtacacacacaaactttcaaacacgcaaactgaaagcagtaattatgacg
tcacacgtTCAGCGgcttcagatcaatgttttgatttgatcgtgtGACGG
TTCTTTTCCCacgagaataatttaccgtcagccgaataaggattattttt
gtaccttcgcgggtgaCCTTTCAGCTCGAGTTTATATATGTCTTATGTTA
TGGTTTTTTGAAGTGCTTGTtctaagagatgagcgaatttgattatttct
agttttcaaaagaagcaaatttaatctttcttctacaagattacacttta
atataatgccaattatgcactttctttttgcatatgttttgcatatatac
tttctaagggaatttcaccacagcaattcagccaccataatctttgcata
caattcaatttggcggatagaaaggcgaaaaggtctatacggtattctac
atccaaatatgcttccaaaaatatatagtttGTCATGGTTTAGGGACTGA
AACTGGGTGGGGCTGAAAAATTAAttcaattctgggacatgcattaagtt
acccgagagtGCTAGGTCCGTGGTTTTTCAAAATTCGGGTTCCTTGATCT
TGTTCACAAAAGTCAGGTCTACCCTAGCTTTGAAAATCGAAGATTGCAAA
TGAACAAAGATCGTTAATAGCTTCTGGTTTTTTGCAATGCAAAGGTGAAT
AGATTATTTTCTACTAAGAAGAAACAAACATGTAGATATGTTACTTTATC
ATTTtagatattaaattttgaatttcatttttatacatttttcctTGCCG
CGTCTTTTGTACCACGGGAAAATACGCGACTTCCAACCAAGCTAccttag
cctgggtatccagactcaaaattttataaaaaatacttttacctcattat
acaaagtttctaaaattttagagtctggtgccaACTAAAAAAGTTGGGTA
CTTACAGTTTATTTGAttctgcctgtgagtgaacccttgttgacagacta
tcaaaactttgtaaacccCGGCAGGCACATGATTAACTTactataaaaaa
tcttttacaaactcaaaaaactttcaaaactactttttcaaaacatcagc
cacatttataaaaaggctcctttccagcggccattttgtttagaaatgaa
cctgtattttcattttcttttgcttCTCTTTTTTTGcatggtcagctttt
tccataaattatgcacgcgcatagaaaaatatacaaaatccCGCAGAAAT
TTGGATCAGTGACTGGTCGCATATTGGCCAGTCAGATGCACTTGATATGC
AGGGacaaatatccctgcagacaagttagttggaccagacagTAAACCAG
AGATTATAagaagattataaaaaactagacggtgaaatagtttactgtct
ggatatccaggctactgtgagagaagtttatatcgaaatctgcaacaaaa
acgaaagtggtctcttctactgattgcttcccgaTGCTCCTTCGCaactg
tttatcaaatttccaccaatgaaatTGCTGCATTTCACACAGCCCTTCTT
TTGGACAagctttttggcacccgtggcctctcagtgccttcaACACGGgc
agctgtaaaatcccaccctttatatttgtttcaatccgtgatcctaaAGG
CTTAGGttcttttctcatcttcaatcacagatcagaaagcaggaattttg
atgcaagagttagattgtcaacaaagtgccataaaaaatcattgaataaa
agaaaaactttgaatcttaaaaacattttcattttgaagaattggtgcaa
aaaagtgaaacatggaaaagtttcactttttattgGTTCAATAGAAATAa
gggatttggaaaactttctatgtttggttttttgcacaaactcctgtaac
tatgggcaagcaccctgttgctaagatgtttgTTGAAATTGGAAGCATTT
GGGGATCCCTCTTCTGACTAGCAAAGAATTGAAATACAACCACACTTATG
TGACCGCCATTAAGAAACATTGCCATGACAATGGACATAATTGCTCAATT
AATGACTTTAAAATTGGTGGACATGcatcaaataaatttcataagaGTCA
TTATTAATTTCTAAAGACAGACCTGACATTATTAATGTGCAGAAAAAATC
TGTACCTTTGTGCTTGTTTTAAGTGATGTTTTTGTGGAAGAGGGCATGGT
GAATTTctagtttgttattttttgattttcttgatttatttAACTAATCT
GTTAATTTTTCTACTTTTAGACTAGATAATGCTCAAAGAAATGAGCGAAA
GATCTCGTAAATGTATGGTGTTTCTCCCTGTCTAAAAgaaagtgaaacca
ctgaaaatgaaaggaAAATCGGCCAGCACTCCAattcccgtaatcttgat
ataggagtttaaacATAGACTGATAGTAAGTACATGTaaagtcaagaaaa
agaaaactgcTGCAAAAAGCATGTAGTTCCCTATAGTTTATTGGCTTGAT
ACAGTTAGAACATTAAAGTTGTCTCAAAAAGCAATAAATTAAGTCTTTTG
TGCCGATGCGGACAGGACATATTTTTGGACCGTATTAGTTTTTACCagtt
aaaaaattcagaatagaTTATTTAAAGACAATAAGTGTCTTTAACGAAAT
TTACCCTTTAGCATGtcagaacaaaacaaaaatggggGTTCTCTAATAGG
AGAAGgtcagtcaaaatttcaaactcattttcaaaatgtcaaatcCAGTT
TATGAAAAGCCCACATACAGTATGCTCAGAAAAATATGGGGATCACTTAT
CTTTCATCCTTTAGTTTTTCAGATattctaccgggtgcaccacaaaaaag
tttctctccttaaaagtaattttctcgaaatctaaaaattttaaaagaac
cattcctattttattggaaagaagaaagaaaaacttaaattatgatgggt
catttattgaattcgattcattagatcaaaatttatgctcaattgaataa
aaaagttacttttggaaagtgctcaaaaacgttaaaaatcgacctatcaa
attattcAGTAGCATAATTATATGATATATCAGAATTTTTGTCTCGTATT
TTcgtaattagctgtctaaatgaccttttgttatttaaaggacggttgaa
tttcaatgaaaggaagaaaattcgtcaaaaaaggccaaaaaatctggtag
aattcataaaaatacatcaaatatggggttcgaggtagatccagccttac
atagactttatccagtctagaaccaaagatctgaggaaaatttcggtaaa
actgaattaaattaattttgatgaggattttaaaccctttccacccttca
gtttcaaaatttatgtgtttagttaatgaaaaatgctcttaatcatgtaa
aggctattgccaTTGCCAaacaagtaaaaatttgataggtcgatttttaa
cgttttcaaggactttctgaaagtaatatttttattcacaggagaaagtt
ttggggaaaaaaattaccacttttccaatctttcacacttttacaacttt
cctaaccaaaaatttgtaaataatgtTTGTAAAAATGGGGGATTTTCCAT
GGTTGCAACACGAAAGcacgaaatagaaaatatttgcataaattttttca
agtaaaagtGACCTTGGAAAATCGTAATTCATGCCCTctataatttatta
ttttatgaaatcgaaagtgaaagttggAGGATGATATGCATAATTTTCAG
CCGAGGCTGGAATAATTATGACATCATAGATCCaattttcccaccaaaat
accaaaacttTGCAAATCCAAATGATTGCTGTTGTTGGCTGAGAAAGTTT
GGAAAAGTCCTCTTTTTCACATCTTCACAACTTTCAAGGAACCTCTTTTG
AGGTGGGAAAAATAGTAAGATATTTTACaacttttattgtttttacaact
tttttagaCCAAAACTTTGACTTTTTGATGAGAAAAGTGGGAGAATTAGC
AAATTTATGNAAGTTTGGAAAAGTCCTATTTTTCACATCTTCACAACTTT
CAAGGAACCTCTTTTGAGGTGGGAAAAATAGTAAGATATTTTACAACTTT
TATGGTTTTTACAACGTTTTTAGAACAAAACTTTGACTTTTTGATGGGAA
AAGTGGGAGAATTAGCAAATTTATGTACCAAAACTTTCTCCTGTCAATtg
agtataacttttgatctgattaatcgaatttaattaatgacccatcaaag
tttaagtctatctttcttctttccaacgaaataggaatggttctttaaaa
atttttagatttcaagaaaattagtttcgaagagagaaacttttttgtgg
cgtaCCCGGTATTTTGAAGTTCCATTTATTTGAAGATTTCTGTACAAAAA
CCTCCTGCCATCTAACGTCTCCACGGCACTGAAATCaaaagtgtttcaaa
aaaaaatctgcgCGGGAAGTTTGGGGTAAGAGTTTTTCTCCATAGCGCAA
GCCGTAGATCTGAGGGTCACTATATCATTAACTTTCCCTTACAATGGAGC
AACCATAAATATACGAAAGATAATTGCACAGTATGAAAGATGAAGGTCTA
AGCTCTTAAAGATCGTAAAAGTacttgttaaaaagataatcttaACTGGA
TGATTTCAaaacctttcaaaaattttggaaatttttaagatgaaaaaaaa
aggagattttttctacttgactaaaaattttgaaattatactttttgaaa
ctttgaacttcgttgatttcaaatatgtatgTCATGTAGCAAAATGGACT
CACTTTGGAGGGAGAAGACATAACCTGGACCCCCCCCTATATGGACCCta
atatggaccccaatatggaccccctcAAAAATGGTGGGAAAACATGTTGG
TTAGCATTCGGTGCATCACATTAGAACAGAGTGGttagaaatcatgtcaa
atAAGGTTGTAAGATTATCAATTATCAGCCAATGTAAAGCActgaaaatc
aaagattttctccGTCGGGCCCAACTATAGTTGGGCTCTCCTTTACCACA
ACTATAAAGAAGAATGTTATTGAGGTTCTGTTCAAAATCAAGGAGATTAA
AAAGACTGATTGTCCGAAAGATTTCAaggtttttatgattttgttaaaGA
AAACGTATTTTATGCATTTTAAGGAGTTGAGGATTTAAccttgagagttg
aaaatataACCATGAGAGTTGAAAATTGAACTTTTCTCCTATTGTCGACA
GATTTCCTTGAAATCCTTCAAAGCTAGCAAAGATCAACTAAAACTCTAGA
AAGTTTGTGGTAAAAAGATGTTCACCATGGAAGTATTTTcccaggaatga
caaaagagcGCAAAACCCTTTATTGTATTTTTGGGTGTACCTGAACCCTG
GAGGACCCTATGTCTGCACCAAAGCCGTTTTATGTGATGTTTGAATGAAC
TTTAGCTCAAATTTTATAATGATAGCGTCATttactagtttgagtaaaga
aaacgagtTTCAAGTTAATTTCAAACTCAAGGTTTGGTGCCATCatcata
gcttcagccaggtttctagctccccccaacaaagtaaggtcccccaacaa
tttagctccccaaaaattgccttgtgctaggtcccataacacttcaggtc
ccaagataaacaaaaacaaaaaattgttctcccgcccccgtggagagaag
tcaataaaaagttaatgcgagtacagtactgataaatgaaaactaaattt
tacttgtatcaatatttatgtttattaatcttttgctttttatatttgat
ttaatataagagatcttttgaaattagcggaacagcccccagagtctcag
tcagatcatctagGCCACCTccaacaatctaggtccccTCAAAtaatttg
gtaattttagcccccaggctctttaaaggccaaaatatttcttagctccc
ccccaaaaaaataaggtaagggggggggctgaagctaTGCCATCTAGGAT
ATAATATAAGCAATCTTCAGAGAAATAAACGTTCTCTATCAGGCTCAGGG
GAAGTAATGTATGCTGTAGTAATTTGAAACATCCTGAAACATATCATTTA
CTTGATTTGCCTAAAAGATCatgttcaaaaatagtgtgacatttagggaa
ctcaaaaattgagtatttcttgaataacttgggaaatatttcaaataaaa
cgttgaaattttatatgatgatcggtatttacacaaagaacatattttga
tgaaaaaaatggtaANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCAGGTCCAAA
TATGTCCAAATATGTGTTTTGTCAGCCACCTCAAAGGAGGAAatggtttg
tttgaaaatgacaCTTGAATCGGTAACTAGAGGTATCATTCATATCAATC
AAAACAGATAAAGGAGCAACATTTTGAAACTGGTTGGTTTCAAAAAGCCA
CCAGTGTTGTCAGCCACATAAACGACTCATAGCTTATCTTGAAATATCTT
GTAACCAATTGAGCCACTTAATTTCGCTCCAAAACAATTGGAAAGGTTAA
TCGTTCTACTTATGCTtggtgaaaaaataaactgttagccaccaaaaata
ctcattttattaacaaaattgtcagccactttgaaaatgtcacaaaacag
gcctttatttttgaacacgATCAAAACTGTTTGGAGTCTCTGTTGTAAGC
TTGCTCAATGCCAATTAAATATCCCTAATACTCAGAACAGAACACATAAA
ACTGAGTTTGCCATCTTCCTTTCCCAGTGGCTTCAGATGTACTGCATTCA
AGGTATTaaactttttgggaaattttaaCACATTAGTATAAGAGTGGTGA
AGCATCTTGGTGTCCTCCTAGGTTAATCTAAACACcccacagacccggta
ggattttttcagccagcggGATAtaaataacgaactgaaactggatgggg
attgatattctcatattttttatgaattgggatttcaattcttttgtttt
caagtcaattaaatccagtggggatgggaaaaatgataaatattccGAAG
TGAggattgttttatttgatttctttcagtggggacaaaaattggaggat
aattttccaacgGAGGCAATATTTTGGCGAGTTTTTCCAGTAGGAAGGgt
tcccaccgggtctgtgagaagggggtgtatctaAATTTGAAGGTTTTGTT
GCTTCAGTAAAATTAAGAAGGACAATAATTGtgcttttatttgcaaaaaa
accatttttccaACTGATTTCCTTCTTCGataaattaaaaacaatatttt
ttaatttttaattttctagaaaaaagaataaaataatgGAAGAAGGGACT
GAAAATGAGAATAATGAGGTTGAACCACCTGCTGGTCTTGTGTTTACAAA
TATAATTCCATCGACATTCACCATCATTGataaaagtgaaagtagtggGT
ACCAAGTTCTTGAGACCGCACCCGCCCAAGAACAATACACAAGAGTTGAA
AAGCGAAAACGTTGTGGTTATGCCAAACGAAGGACTTATTTCTCGACAGA
GTTAACAGCAAAGAAACTTAGAGTATTATCAAATAATGGAATAGCTGATG
AActacaaaaattttttgataaatatccAAGAGCAAAGGATTATGTGAAT
TTGTCTGATGATAAGAAACGATCTGCTTTGCATTTTGCAGCATCTAGAGG
TGCGGATGAATTGGTTCACTTGCTGCTACAGCAAGGAGCTGACCCAAACG
CACAAGACTGTAATGGAAATACACCCTTACATTTAGCAGCTTGTACTCAC
CATATTCGAGTTATAACATTATTATTGAGGTTTGGAGGAGATGTTAAAAT
GACAGATTTATCTGGAAAAACACCATTACATTTATCTCATTCGCGTTTAA
AGATGCTTTCTAGAGAGCGCAATGTAGATAGTAAAAAGTTTTCAGCCTAC
ACAATGGAAAAAAGGAAAGCGGAGGTTTTGGAAATAATTTCAATGTTGAC
GGAATATTTTGATAAGTGTGGACAGAAAGAAGATTATTTTAAAATGTGTG
AAATGAAAACGCAATTGCTAGCTGTTCAAACAGAACAAGGGGTAAGTTTT
AATTAGATTTGATGCtattttttggaataaactAAAAGTTTTCTCATTAC
AAAAACTGATCTTATCAATCTACTTTACCAATTGGTATACTATAATCCTT
TATATCGTCGATTGCAATAATTAAATTTGTCATTATCATTTTTTGACTAG
TCGATTTATGCTCTTTTAGGTTGATGAAGTCAACAATTTGCTTTCCAGTT
TTACTCAAATGAACATTGACGCATCATCAAACAAACCGTGATAGTCATTT
GGTTAACTCTTAAAATCAATTGCATAGGTTTCTAGATATTTGTTAAGCTA
CAGAATATATATAAATCCTTAACCCTAATCGTAAtagggggctgtttctg
ttcggagaTGAAACTATtgttaatagctcctgaaataatcgAGCTTTTgg
aatgaaattttctgtaaattactaacttttttatttagcttcaagaTTAA
GAGATGATACAGGATCAGCCCCCCTTATtatgaaccgcccctaaaagcct
agtatgaataaaATAGGGTTAAATTCTGGAGGTTTTAAGTTACTTACTTA
CGTTTTTATACACATCTATATTTTGTATCAGTCTATTTTGTAAGCTATTT
AATTAATGACAACTTATGTAGTACGTCCTTTATTGTTTCCTCTTTACttg
ttttctaattttctaataCAGAACTTGGTATGGAGAAAGTTTATCACTG Coding sequence (CDS) from alignment at sc0000187:40093..52291+ >TCONS_00014360 ID=TCONS_00014360|Name=TCONS_00014360|organism=Clytia hemisphaerica|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000187:40093..52291+ (Clytia hemisphaerica)
atgGAAGAAGGGACTGAAAATGAGAATAATGAGGTTGAACCACCTGCTGG
TCTTGTGTTTACAAATATAATTCCATCGACATTCACCATCATTGataaaa
gtgaaagtagtggGTACCAAGTTCTTGAGACCGCACCCGCCCAAGAACAA
TACACAAGAGTTGAAAAGCGAAAACGTTGTGGTTATGCCAAACGAAGGAC
TTATTTCTCGACAGAGTTAACAGCAAAGAAACTTAGAGTATTATCAAATA
ATGGAATAGCTGATGAActacaaaaattttttgataaatatccAAGAGCA
AAGGATTATGTGAATTTGTCTGATGATAAGAAACGATCTGCTTTGCATTT
TGCAGCATCTAGAGGTGCGGATGAATTGGTTCACTTGCTGCTACAGCAAG
GAGCTGACCCAAACGCACAAGACTGTAATGGAAATACACCCTTACATTTA
GCAGCTTGTACTCACCATATTCGAGTTATAACATTATTATTGAGGTTTGG
AGGAGATGTTAAAATGACAGATTTATCTGGAAAAACACCATTACATTTAT
CTCATTCGCGTTTAAAGATGCTTTCTAGAGAGCGCAATGTAGATAGTAAA
AAGTTTTCAGCCTACACAATGGAAAAAAGGAAAGCGGAGGTTTTGGAAAT
AATTTCAATGTTGACGGAATATTTTGATAAGTGTGGACAGAAAGAAGATT
ATTTTAAAATGTGTGAAATGAAAACGCAATTGCTAGCTGTTCAAACAGAA
CAAGGGGTTGATGAAGTCAACAATTTGCTTTCCAGTTTTACTCAAATGAA
CATTGACGCATCATCAAACAAACCGTGAatgGAAGAAGGGACTGAAAATG
AGAATAATGAGGTTGAACCACCTGCTGGTCTTGTGTTTACAAATATAATT
CCATCGACATTCACCATCATTGataaaagtgaaagtagtggGTACCAAGT
TCTTGAGACCGCACCCGCCCAAGAACAATACACAAGAGTTGAAAAGCGAA
AACGTTGTGGTTATGCCAAACGAAGGACTTATTTCTCGACAGAGTTAACA
GCAAAGAAACTTAGAGTATTATCAAATAATGGAATAGCTGATGAActaca
aaaattttttgataaatatccAAGAGCAAAGGATTATGTGAATTTGTCTG
ATGATAAGAAACGATCTGCTTTGCATTTTGCAGCATCTAGAGGTGCGGAT
GAATTGGTTCACTTGCTGCTACAGCAAGGAGCTGACCCAAACGCACAAGA
CTGTAATGGAAATACACCCTTACATTTAGCAGCTTGTACTCACCATATTC
GAGTTATAACATTATTATTGAGGTTTGGAGGAGATGTTAAAATGACAGAT
TTATCTGGAAAAACACCATTACATTTATCTCATTCGCGTTTAAAGATGCT
TTCTAGAGAGCGCAATGTAGATAGTAAAAAGTTTTCAGCCTACACAATGG
AAAAAAGGAAAGCGGAGGTTTTGGAAATAATTTCAATGTTGACGGAATAT
TTTGATAAGTGTGGACAGAAAGAAGATTATTTTAAAATGTGTGAAATGAA
AACGCAATTGCTAGCTGTTCAAACAGAACAAGGGGTTGATGAAGTCAACA
ATTTGCTTTCCAGTTTTACTCAAATGAACATTGACGCATCATCAAACAAA
CCGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014360-exon-sc0000187-1491911889:40093..40101 | TCONS_00014360-exon-sc0000187-1491911889:40093..40101 | Clytia hemisphaerica | exon |
| TCONS_00014360-exon-sc0000187-1510915933:40093..40101 | TCONS_00014360-exon-sc0000187-1510915933:40093..40101 | Clytia hemisphaerica | exon |
| TCONS_00014360-exon-sc0000187-1575043694:40093..40101 | TCONS_00014360-exon-sc0000187-1575043694:40093..40101 | Clytia hemisphaerica | exon |
| TCONS_00014360-exon-sc0000187-1491911889:50812..51583 | TCONS_00014360-exon-sc0000187-1491911889:50812..51583 | Clytia hemisphaerica | exon |
| TCONS_00014360-exon-sc0000187-1510915933:50812..51583 | TCONS_00014360-exon-sc0000187-1510915933:50812..51583 | Clytia hemisphaerica | exon |
| TCONS_00014360-exon-sc0000187-1575043694:50812..51583 | TCONS_00014360-exon-sc0000187-1575043694:50812..51583 | Clytia hemisphaerica | exon |
| TCONS_00014360-exon-sc0000187-1491911889:51762..52291 | TCONS_00014360-exon-sc0000187-1491911889:51762..52291 | Clytia hemisphaerica | exon |
| TCONS_00014360-exon-sc0000187-1510915933:51762..52291 | TCONS_00014360-exon-sc0000187-1510915933:51762..52291 | Clytia hemisphaerica | exon |
| TCONS_00014360-exon-sc0000187-1575043694:51762..52291 | TCONS_00014360-exon-sc0000187-1575043694:51762..52291 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:40093..52291 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00014360 vs. Swiss-Prot (Human)
Match: ANR54 (Ankyrin repeat domain-containing protein 54 OS=Homo sapiens GN=ANKRD54 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.401e-40 Identity = 77/166 (46.39%), Postives = 109/166 (65.66%), Query Frame = 2
Query: 344 SDDKKRSALHFAASRGADELVHLLLQQGADPNAQDCNGNTPLHLAACTHHIRVITLLLRFGGDVKMTDLSGKTPLHLSHSRLKMLSRERNVDSKKFSAYTMEKRKAEVLEIISMLTEYFDKCGQKEDYFKMCEMKTQLLAVQTEQGVDEVNNLLSSFTQMNIDASS 841
+DDK R+ALHFA+ G D++V LLL GADPN +D GNTPLHLAACT+H+ VIT LLR G V D +G+TPLHL+ S+L +L ++ A +E + EV +II ML EY ++ GQ E ++ ++ T+L T++ VDEV +LL+SFT +++ S
Sbjct: 139 ADDKGRTALHFASCNGNDQIVQLLLDHGADPNQRDGLGNTPLHLAACTNHVPVITTLLRGGARVDALDRAGRTPLHLAKSKLNIL--------QEGHAQCLEAVRLEVKQIIHMLREYLERLGQHEQRERLDDLCTRLQMTSTKEQVDEVTDLLASFTSLSLQMQS 296
The following BLAST results are available for this feature:
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