TCONS_00014084 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014084
Unique NameTCONS_00014084
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length147

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014084 ID=TCONS_00014084|Name=TCONS_00014084|organism=Clytia hemisphaerica|type=transcript|length=147bp
TGCTTTTGATGTAGTAATAAGTACTACAAAAATCAAGGTCGTGTAAAGGT
ATATAAGtagcattgttttattttgtcttcTCTAAGGGTCCCGTTTACtt
tcagtttatttttctttactcAAGAATGGCTACATATGAAACCTATG
Run BLAST on NCBI

transcript from alignment at sc0000180:399197..399343

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014084 ID=TCONS_00014084|Name=TCONS_00014084|organism=Clytia hemisphaerica|type=transcript|length=147bp|location=Sequence derived from alignment at sc0000180:399197..399343 (Clytia hemisphaerica)
CATAGGTTTCATATGTAGCCATTCTTgagtaaagaaaaataaactgaaaG
TAAACGGGACCCTTAGAgaagacaaaataaaacaatgctaCTTATATACC
TTTACACGACCTTGATTTTTGTAGTACTTATTACTACATCAAAAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007884XLOC_007884Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014084-exon-sc0000180-1491911889:399197..399343TCONS_00014084-exon-sc0000180-1491911889:399197..399343Clytia hemisphaericaexon
TCONS_00014084-exon-sc0000180-1510915933:399197..399343TCONS_00014084-exon-sc0000180-1510915933:399197..399343Clytia hemisphaericaexon
TCONS_00014084-exon-sc0000180-1575043694:399197..399343TCONS_00014084-exon-sc0000180-1575043694:399197..399343Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000180supercontigsc0000180:399197..399343 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014084 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top