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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013857 ID=TCONS_00013857|Name=TCONS_00013857|organism=Clytia hemisphaerica|type=transcript|length=608bp
CTATTATTTTGCTCCCACATTCAAAAGCTATATGTTTTCACGATATCAGC
CACCTTAGATTGAAGAAAATAAGCCCAATTATCTACCAATATccaaatat
ttctcatatttgAAAACATTGTTGAGAGTTTCGCACACAATTTTGAACTA
CTACTAAAGTAAAGTGAAAGGAAAAAAGACTTTTGGCAGACTTTATAACT
AAAACAGTTGACTAAATCTGAGGTTATAAGAAAAGGATGGAATTTTTCAA
GGATTCAATTTCTATCTGTCTGATTGTGATCTTGTTGGTTACAATTTCAT
TTTCgaagAGTATTATTCAAGAGGATGAAGAGCTGGTGAAAAGGAAAGAT
ATTATCAACAATCACGAAGATGAAGAAGTATCAAACACATTGGATCGGCG
ATCATCTCGTTGCGATTTATCGATCTCAGCCTGTATCCCAGGTGTCGTGT
CATCGTGCAGAACAAACGATCAATGCCGTGCGTGTTGTGGTAGTGTTGAA
TATATGTGTCTCTACGGAATGTGTTGTAGAGACTCTAACGTGATTAATTT
TAGAAAGCTTTAATTTAATAAAAGAAAAGATCATCACGTTATAATAATTT
AAACTTCG Run BLAST on NCBI transcript from alignment at sc0000174:585091..586494+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013857 ID=TCONS_00013857|Name=TCONS_00013857|organism=Clytia hemisphaerica|type=transcript|length=1404bp|location=Sequence derived from alignment at sc0000174:585091..586494+ (Clytia hemisphaerica)
CTATTATTTTGCTCCCACATTCAAAAGCTATATGTTTTCACGATATCAGC
CACCTTAGATTGAAGAAAATAAGCCCAATTATCTACCAATATccaaatat
ttctcatatttgAAAACATTGTTGAGAGTTTCGCACACAATTTTGAACTA
CTACTAAAGTAAAGTGAAAGGAAAAAAGACTTTTGGCAGACTTTATAACT
AAAACAGTTGACTAAATCTGAGGTTATAAGAAAAGGATGGAATTTTTCAA
GGATTCAATTTCTATCTGTCTGATTGTGATCTTGTTGGTTACAATTTCAT
TTTCgaaggtaaattttttttgaaatttttcttttttttccattGCCATG
TTTATCGTAAATCATAGATCCTTTaaaacaccccttctcacagacccggt
aggattttctTAGCCAGTTGAGGTAAAAAAAAcgaaccaaaactcgatgg
gattgatattcccatattttagCTTCAGATTTCAATTCCATAGTTTTCAA
GTCAATAAATTCAGGGAAAAGTCGCATAATATTTTACAATGAGGATTGGT
TTGATGATTATTactatccatatagcggtcattaagtaagccattaaagg
ttcGAACgacgggcggtattgaaaggttttgtgactcaaattgtcatacc
cacgctgaggaaactaaagcgccaggcctcagagggctgaaatatcatta
accgcccgggtatagggcaataacgtcatttgcaGCCTACTTGGAATTGG
ATTGAAGTCGTTGTATTAAAGCGAAGAGACTAAAAtaaagtcagaaaaaa
aacactttttggtcatttgcggcccgctcgcaaggtgctaaaaatttttt
gaagagatTGCATTGAAGCGGAAAGACTTggttgacgctagaaaaaaaac
gttgtttgaatgtccgatatgaataataatagtaatagcgtcaATTTTTC
GTTCGTagttgtcattaattctgcccttgcagtttgattattagccctct
agtgccaaATGACACCATCGGGCGAATAATCAAACTACgggggcagaaaa
taacaacaacgacctcacactgaacgctattgttatattatcaTTCTGAT
TTAGAGTATTATTCAAGAGGATGAAGAGCTGGTGAAAAGGAAAGATATTA
TCAACAATCACGAAGATGAAGAAGTATCAAACACATTGGATCGGCGATCA
TCTCGTTGCGATTTATCGATCTCAGCCTGTATCCCAGGTGTCGTGTCATC
GTGCAGAACAAACGATCAATGCCGTGCGTGTTGTGGTAGTGTTGAATATA
TGTGTCTCTACGGAATGTGTTGTAGAGACTCTAACGTGATTAATTTTAGA
AAGCTTTAATTTAATAAAAGAAAAGATCATCACGTTATAATAATTTAAAC
TTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013857-exon-sc0000174-1491911889:585091..585398 | TCONS_00013857-exon-sc0000174-1491911889:585091..585398 | Clytia hemisphaerica | exon |
| TCONS_00013857-exon-sc0000174-1510915933:585091..585398 | TCONS_00013857-exon-sc0000174-1510915933:585091..585398 | Clytia hemisphaerica | exon |
| TCONS_00013857-exon-sc0000174-1575043694:585091..585398 | TCONS_00013857-exon-sc0000174-1575043694:585091..585398 | Clytia hemisphaerica | exon |
| TCONS_00013857-exon-sc0000174-1491911889:586195..586494 | TCONS_00013857-exon-sc0000174-1491911889:586195..586494 | Clytia hemisphaerica | exon |
| TCONS_00013857-exon-sc0000174-1510915933:586195..586494 | TCONS_00013857-exon-sc0000174-1510915933:586195..586494 | Clytia hemisphaerica | exon |
| TCONS_00013857-exon-sc0000174-1575043694:586195..586494 | TCONS_00013857-exon-sc0000174-1575043694:586195..586494 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000174 | supercontig | sc0000174:585091..586494 + |
Blast
The following BLAST results are available for this feature:
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