|
Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013699 ID=TCONS_00013699|Name=TCONS_00013699|organism=Clytia hemisphaerica|type=transcript|length=8044bpRun BLAST on NCBI transcript from alignment at sc0000171:112491..154290- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00013699 ID=TCONS_00013699|Name=TCONS_00013699|organism=Clytia hemisphaerica|type=transcript|length=41800bp|location=Sequence derived from alignment at sc0000171:112491..154290- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00013699 vs. Swiss-Prot (Human)
Match: NOTC2 (Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3) HSP 1 Score: 376.326 bits (965), Expect = 1.534e-104 Identity = 305/918 (33.22%), Postives = 427/918 (46.51%), Query Frame = 3
Query: 1398 PCAHGSKCTETVGVGFQCSCAVGYKGRTCNERNMCLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSCE-PNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSENDKGDNSIE---AIANLLHIGHVSEIDENAVSRTSIPGAVKTTISHGV--CPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQE--KSCL-----CENGGSCVGEGFEAKCLCKPGFGGSKCQEHT-QCNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRCQDTDICKPNPCLHAGSCQD--MGDTYKCECKSGFKGRHC-EDMDLC---QPNPCKNSGQCFGFNGGYQCDCPKGYRGKNCDQKVH-CLTNPCSNGAECIEILPTPEHPDGGYKCGCKSGFMGTTCE-DINHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQ-ETDYCQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTCTE-PDRCSPNPCAHGACQEIAGGYFCNCTTGFKGTKCS-EIDHCAPNPCLHDGRCSEINGGLGFVCQCQLGYKGQNCE-HKDLCHPNPCEHDGLCHEIMTSSSDILS--------SRDFIRNARDRYTKRSS-------------ELDTHAQNKTKRDVGGEVECI---CTKGYKGRKC------------ADMDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQL-MDMCSPNPCR-----------YGTHC-LQTDEESYQCVKNLCQPNPCKNDGKCIVV-NDEDTSCACAKGWKGKHCE-EHDACFPNPCFNGGTCHVSHDVTKGINSGADNFTCECPKEFKGHTCDAPADPPKPKTSNLCASIKCKNGGTCIDREDSFLCRCPDGFQGAFCEESV--CTPTPCSNGGTCIPYYGIALCKCTPSYTGAHC 3914
PC +G C ++C+C VG+ G+ C + CL +PC N C TT FSC+C +TG C + C+ P CQ+ CL L G Y+C C +G+ G+ C +S+ A + ++ G + + +PG +T + CP + C +GG+C +D + + C C +TG C E CL C+NGG+C C+C G+ G C E+ C +C G CI+ V F C C G G C D C NPC C + Y C C G+KG C ED+D C NPC+++G+C +G + C+C KGY G C+ ++ C ++PC N A C++ + GG+ C C GF G CE +IN C +PC N G+CV V+ F+C C G+ G +CQ + D C PC N C + NG+ C C+ G+ G+ C E D C P+PC HG CQ+ Y C C G+ G CS +ID C +PCL+DGRC ++ G+ C CQ G G NCE + D C NPC H G+C + + S + S + D A + K ++ E H ++ + CI CT G G KC D + C NPC + C D+ C C G+KG +CQ+ +D C+ NPC Y HC L ++ Q V C PNPC+N C N E +C CA GW+G+ C + D C PC N G CH T+G ++ CECP F G C+ D C + C+NGG+C+D ++F C C GF G C+ + C PC NGGTC Y CKC + G HC
Sbjct: 114 PCLNGGTCHMLSRDTYECTCQVGFTGKECQWTDACLSHPCANGSTC---TTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCL--NLPGSYQCQCPQGFTGQYC-------DSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVC-VDGV--NTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKI-------GGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCI--DHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVN--GYQCNCQPGTSGVNCEINFDDCASNPCIH-GICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTC--DNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCH----NTQG------SYMCECPPGFSGMDCEEDIDD--------CLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHC 984 HSP 2 Score: 371.318 bits (952), Expect = 4.933e-103 Identity = 303/890 (34.04%), Postives = 426/890 (47.87%), Query Frame = 3
Query: 1386 CHPNPCAHGSKCTETVGVGFQCSCAVGYKGRTCNERNM--CLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSC--EPNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSENDKGDNSIEAIANLLHIGHVSEIDENAVSRTSIPGAVKTTISH--GVCPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQE--------KSCLCENGGSCVGEGFEAKCLCKPGFGGSKCQ-EHTQCNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRCQ-DTDICKPNPCLHAGSCQDMGDTYKCECKSGFKGRHCE-DMDLCQPNPCKNSGQCFGFNGGYQCDCPKGYRGKNCDQKV-HCLTNPCSNGAECIEILPTPEHPDGGYKCGCKSGFMGTTCED-INHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQ-ETDYCQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTC-TEPDRCSPNPCAHGA-CQEIAGGYFCNCTTGFKGTKC-SEIDHCAPNPCLHDGRCSEINGGL-GFVCQCQLGYKGQNCE-HKDLCHPNPCEHDGLCHEIMTSSSDILSSRDFIRNARDRYTKRSSELDTHAQNKTKRDVGGEVECICTKGYKGRKCAD-MDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQL-MDMCSPNPCRYGTHCLQTDEESYQCV-------------KNLCQPNPCKNDGKCIV-VNDEDTSCACAKGWKGKHCE-EHDACFPNPCFNGGTCHVSHDVTKGINSGADNFTCECPKEFKGHTCDAPADPPKPKTSNLCASIKCKNGGTCIDREDSFLCRCPDGFQGAFCEESV--CTPTPCSNGGTCIPYYGIALCKCTPSYTGAHCNAL 3923
C P+PC +G C +T F+C+C G++G TC ERN+ C + C+N GVC + T ++C+C WTG CT+ C +PN CQN C GGY CVC G+ G CSEN I+ A + ID A P + H C NPC G +C+ + L CTC G+ G C E S CE+ G CV C C G+ G +C+ + +C+ D C + C++++GGF C C G+KG C+ + + C+ NPC++ G C D + ++C C GF G C+ D+D C PC N +C GY+C C G+ G C++ + +C +PC +G +C + + + Y C C G+MG C D I+ CY SPC N G+C+ V+ ++C+C G G C+ D C NPC +G C + N + C CS G+ G C + D C+ NPC GA C G+ C C G C S+++ C NPC+H G C+ GGL G+ C C G+ G NCE K+ C NPC++ G C ++ N + + +S + Q D+ G C C Y G+ C + PC PNPC + +VC S TC C+ GW+G+ C + +D C PC C T + SY C + C NPC+N G C+ VN SC C G+ G C+ + + C PC NGGTC + +NS +TC+C F G C+ N C C NGGTC+D +SF C CP GF G+FC + C+ PC N GTC+ G C C YTG +C L
Sbjct: 225 CAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTC-ERNIDDCPNHRCQNGGVCVDGVNT---YNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCA--NRNGGYGCVCVNGWSGDDCSEN------IDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLN-GQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHG-QCQDGIDS-------YTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCI-HGICM--DGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIH-GNCT---GGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLN-QGTCFDDISG-YTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNT-QGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVN--TFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTC------SDYVNS----YTCKCQAGFDGVHCE--------NNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTL 1063 HSP 3 Score: 338.576 bits (867), Expect = 5.395e-93 Identity = 317/1011 (31.36%), Postives = 434/1011 (42.93%), Query Frame = 3
Query: 1359 PLDEFVRNHCHPNPCAHGSKCTETVGVGFQCSCAVGYKGRTCN-ERNMCLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSCEPNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSEN--------------DKGDNSIEAIANLLHIGHV--SEIDE----------------NAVSRTSIPGA--VKTTISHGVCPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQE-----KSCLCENGGSCVGEGFEAKCLCKPGFGGSKCQEHT-QCNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRCQ-DTDICKPNPCLHAGSCQDMGDTYKCECKSGFKGRHCE-DMDLCQPNPCKNSGQCFGFNGGYQCDCPKGYRGKNCDQKVH-CLTNPCSNGAEC-----------------------IEILPTPEHP----------DGGYKCGCKSGFMGTTCE-DINHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQ-ETDYCQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTC-TEPDRCSPNPCAHG-ACQEIAGGYFCNCTTGFKGTKC-SEIDHCAPNPCLHDGRCSEINGGLG-FVCQCQLGYKGQNCEH-KDLCHPNPCEHDGLCHEIMTSSSDILSSR------DFIRNARDRYTKRSSELDTHA--QNKTKRDVGGEVECICTKGYKGRKCAD-MDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQL-MDMCSPNPCRYGTHCLQT----------DEESYQCVKNL--CQPNP-CKNDGKCIVVNDEDTSCACAKGWKGKHCE-EHDACFPNPCFNGGTCHVSHDVTKGINSGADNFTCECPKEFKGHTCDAPADPPKPKTSNLCASIKCKNGGTCI---DREDSFLCRCPDGFQGAFCE-------------------------------ESVCTPTPCSNGGTC-----IPYYGIALCKCTPSYTGAHCNALKPGRKPQPA 3950
P E N CH +PC + + C + +G GF C C G+KG C E N C NPC N G C + F C C +TG VC C PC N A+C+ GYEC C G+ G LC EN G +S I N ++G + +IDE N PG V I+ C NPC+HG IC MD + + C C GFTG C S C G +C+ +C+C G C +C + C+HG C + G+KC CD G+ G C+ D + C NPC + G+C ++ + Y+C CK GFKG +C+ ++D C NPC N G CF GY C C Y GKNC + C NPC N A C I+I P G Y C C GF G CE DI+ C +PC NGG C+ GV+ F C C G+ G CQ + + C PC N G C+ + N + C C G+ G+ C + C+ + C +G C + + C C GF G+ C EI+ C+ +PCL++G C + GLG + C C LGY G+NC+ +LC +PC++ G C + S + S D + D R L H + + G C C GY G C + +D C NPC H + C D C+C G++G +C+ +D C PC+ G C+ C +N+ C P C N G+C+ SC C G+ G+ CE + + C NPC + G S D + N ++ C C F G C+ D +C + C NGGTC + D F+CRCP GF GA C+ ES C +PC +GG+C PYY C+C P ++G+ C PA
Sbjct: 451 PRCEMDINECHSDPCQNDATCLDKIG-GFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNR---FQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDH--PNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHG-IC-MDGI--NRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGN-CTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCS--DYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVD---GLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATC--SDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMD-RIGGYSCRCLPGFAGERCEGDINECLSNPCSSEG----SLDCIQLTN----DYLCVCRSAFTGRHCETFVD--------VCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQSSCGQVKCRKGEQCVHTASGPRCFCPSPRDCESGCASSPCQHGGSCHPQRQPPYYS---CQCAPPFSGSRCELYTAPPSTPPA 1423 HSP 4 Score: 329.331 bits (843), Expect = 4.205e-90 Identity = 296/973 (30.42%), Postives = 411/973 (42.24%), Query Frame = 3
Query: 1374 VRNHCHPNPCAHGSKC-TETVGVGFQCSCAVGYKGRTCNER----NMCLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSCEPNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSENDKGDNSIEAIANLLHIGHVSEIDENAVSRTSIPGAVKTTISHGVCPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQE-----KSCLCENGGSCVGEGFEAKCLCKPGFGGSKCQEHTQ-CNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRCQD-TDICKPNPCLHAGSCQDMGDTYKCECKSGFKGRHCE--------------------------------------DMDLCQPNPCKNSGQCF-GFNG------------------------------------GYQCDCPKGYRGKNCD-QKVHCLTNPCSNGAECIEILPTPEHPDGGYKCGCKSGFMGTTCE-DINHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQETDY-CQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTCT-EPDRCSPNPCA-HGACQEIAGGYFCNCTTGFKGTKCSE-IDHCAPNPCLHDGRCSEINGGLGFVCQCQLGYKGQNCE-HKDLCHPNPCEHDGLCHEIMTSSS-DILSSRDFI--RNARDRYTKRSSELDTHAQNKTKRDVGGEVECICTKGYKGRKCA-DMDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQ-LMDMCSPNPCRYGTHCLQTDEESYQCV-----------------------KNLCQPNPCKNDGKCIVVNDEDTSCACAKGWKGKHCEEH-DACFPNPCFNGGTCHVSHDVTKGINSGADNFTCECPKEFKGHTCDAPADPPKPKTSNLCASIKCKNGGTCIDREDSFLCRCPDGFQGAFCEESV--CTPTP-CSNGGTCIPYYGIALCKCTPSYTGAHC 3914
+ + C NPC G+ C T + + C+C GYKG C E M NPCE+ G C T F C+C + G C + C +PCQN+A CL GG+ C+C G+KG C EI+E C NPC++ G C +D + + +C C GFTG +CQ S C NG C+ +C C GF G C+E+ C+ D C HG C + + + C C+ GY G C D D C +PCL+ G C D+ + Y+C C+ G G +CE D+D C NPC+ C G NG GY+C C G+ G NC+ K CL+NPC NG C ++ GY+C CK GF G C+ +I+ C +PC N G C + + C C L Y G CQ C PNPC N C + + C C+ GW+G CT + D C PC HG C G Y C C GF G C E ID C NPC + G C ++G F C C G+ G C+ + C PC++ G C + + S + + D + N + T+ S T D C+C G+ G C +++ C +PCL+ C+ D + C C LG+ G++CQ L+++CS +PC+ C+Q ES QC+ + + + C++ G CI + C C G+ G +CEE D C NPC +G TC D G + CEC ++G C+ D C + C+NGGTCID + F C CP G +G CEE++ C P C NGG C+ G C+C P + G C
Sbjct: 375 LDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCV---NTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDK--IGGFTCLCMPGFKGVHCE---------------------LEINE--------------------CQSNPCVNNGQC-VDKV--NRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQ-CQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLV-------NGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSC--MDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSC-----FNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCV--DGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAES-QCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHY-CQCPLGYTGSYCEEQLDECASNPCQHGATC---SDFIGG-------YRCECVPGYQGVNCEYEVDE--------CQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERC 1261 HSP 5 Score: 301.212 bits (770), Expect = 1.256e-81 Identity = 266/846 (31.44%), Postives = 369/846 (43.62%), Query Frame = 3
Query: 1512 PCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSCEPNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSENDKGDNSIEAIANLLHIGHVSEIDENAVSRTSIPGAVKTTISHGVCPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQ-EKSCL---CENGGSCVGEGFEAKCLCKPGFGGSKCQEHTQCNE----DTCMHGGLCIEEVGGFKCKCDVGYKGKRCQDTDI-CKPNPCLHAGSCQDMGD-TYKCECKSGFKGRHCE-DMDLCQPNPCKNSGQCFGFNGGYQCDCPKGYRGKNCDQKV-HCLTNP--CSNGAECIEILPTPEHPDGGYKCGCKSGFMGTTC-EDINHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQETDYCQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTCTEP-DRCS---PNPCAH-GACQEIAGGYFCNCTTGFKGTKCS-EIDHCAPNPCLHDGRCSEINGGLGFVCQCQLGYKGQNCEHK-DLCHPNPCEHDGLCHEIMTSSSDILSSRDFIRNARDRYTKRSSELDTHAQNKTKRDVGGEVECICTKGYKGRKC-ADMDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQL-MDMCSPNPCRYGTHCLQTDEESYQCVKN-------------LCQPNPCKNDGKCI-VVNDEDTSCACAKGWKGKHCE-EHDACFPNPCFNGGTCHVSHDVTKGINSGADNFTCECPKEFKGHTCDAPADPPKPKTSNLCASIKCKNGGTCIDREDSFLCRCPDGFQGAFCEESV--CTPTPCSNGGTCIPYYGIALCKCTPSYTGAHCNALK 3926
PC NEG+C + G+ C+C + + G C Q + CE N CQN C+ + G C C G+ G+ C + + SH PCL+GG C M L CTC GFTG CQ +CL C NG +C + C C GF G KC+ T NE C HGG C+ G ++C+C G+ G+ C + C P+PC++ G+C+ GD T++C C GF+G CE ++D C + C+N G C Y C CP + G+ C + V CL P C NG C + +GGY C C +G+ G C E+I+ C + C G C+ V F C C G G LC D C NPC C +N + ++C C +G++G CTE D C+ NPC H G C G + C C G+ G +C +I+ C +PC +D C + G GF C C G+KG +CE + + C NPC ++G C +K R +C+C G+ G C D+D C PCL+ + CI D C+C+ G+ G C+ +D C P+PC +G Q +SY C+ N C +PC NDG+CI +VN C C G G +CE D C NPC +G + D G + ++C C F G C+ D CAS C+ G TCI+ + F C CP+G C V C PC + G C C C + G +C K
Sbjct: 34 PCVNEGMCV-TYHNGTGY-CKCPEGFLGEYC-QHRDPCEKNRCQNGGTCVAQAMLGKATCRCASGFTGEDC---------------------------------------QYSTSHPCFVSRPCLNGGTCHM--LSRDTYECTCQVGFTGKECQWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCE--TDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTC-------ANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIG--GFTCLCMPGFKGVHCELEINECQSNPCVNNGQC-----------------------------------VDKVNR-----FQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCI--DHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQ--CQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVN--GYQCNCQPGTSGVNCEINFDDCASNPCIHG----ICMD-------GINRYSCVCSPGFTGQRCNIDIDE--------CASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIH-GNCTGGLSGYKCLCDAGWVGINCEVDK 758 HSP 6 Score: 87.4261 bits (215), Expect = 1.039e-16 Identity = 71/241 (29.46%), Postives = 99/241 (41.08%), Query Frame = 3
Query: 3246 PCLHNSVCISDDKSTSTTCKCSLGWKGEHCQLMDMCSPNPCRYGTHCLQTDEESYQCVKNLCQPNPCKNDGKCIV-VNDEDTSCACAKGWKGKHCE---EHDACFPNPCFNGGTCHVSHDVTKGINSGADNFTCECPKEFKGHTCDAPADPPKPKTSNLCASIKCKNGGTCIDREDSFLCRCPDGFQGAFCEESVC---TPTPCSNGGTCIPYYGIALCKCTPSYTGAHCNALKPGRKPQP 3947
PC++ +C++ T CKC G+ GE+CQ D C + N C+N G C+ +C CA G+ G+ C+ H PC NGGTCH+ D + C C F G C + ++ C S C NG TC + F C+C GF G CE V P C +GGTC+ G C+C +TG +C++L P P
Sbjct: 34 PCVNEGMCVTYHNGTGY-CKCPEGFLGEYCQHRDPC--------------------------EKNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTSHPCFVSRPCLNGGTCHML---------SRDTYECTCQVGFTGKEC---------QWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSP 229 The following BLAST results are available for this feature:
BLAST of TCONS_00013699 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
|
Copyright © 2026, MARIMBA.