|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013568 ID=TCONS_00013568|Name=TCONS_00013568|organism=Clytia hemisphaerica|type=transcript|length=982bp
AATCGTAAATCTGATTCAACAAAAAGGAGGGTAAAAACTTTGTCTACTGA
AAGACGGTTGCTCAAGCCAGAAACTCAATATCCATCCGTGCCTGATGTTC
GAATAAAGAAGACACCTTCTGTTGAAAATTTTCGTGGTACTCttaaaaac
aagaagaaatcTCGCTCAGAAATGAAACTTTCATCAAGCTCTAAAGATGA
AAATATGGAAATTGAGGAAGAAGACAAAGTTCACACAATAATGAAATCGT
TAGCTGGTGAGGagaatgttatttttatttgtttattgaTGTTTTCTAAT
CCACTTTAAAAACCATTTTTACCACTCTAGATGACAattacaaatatctt
cattttgcgtCGCCCGACCGGCGGCTcttaaaaattgagtaaaattgagT
CGGAAAGTCAGTAAAATGGTCGGACTTTTTGTGTCGATGACGTTTCCTTC
ACTCAAAAACTTAATTATTACTAATTTTTTTACGAGTGATTCTTCTAGTT
CATTCACagcattttaactttgtttatcattacatgtgcCATTTTGTGTC
AAAGGTCACAGGTGGTCACAGTGTTTGTTCAAgggtcataatttgaaacc
atgCAATACACACGGTCGTTTTGGCTAtcgaacatttttttctttgaaaa
atggatgatggaggCCGGATGAGGGGAAGAAATTCACCTCAAATATTTGA
CTACCAAAGGGGttttaagtacctgaaaataGGACTGGTTGTTAGACTGT
TTGTTAAGGGCTGTTAAATGTCCAGCTAACAGTTGGGTctttaagataaa
aacggcaattattgctctttttgggaattattgccgaaaacggcaatttt
ttcagcGATGatatgctgaatcagcaaaaaaataaaaaactaaataaatg
aaaattgccgtctTCAGCAATTATTGCATTTTTTGGAAAgtaatttgatt
gattttattattgaacacatGGTATTTGACAC Run BLAST on NCBI transcript from alignment at sc0000170:259898..260879+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013568 ID=TCONS_00013568|Name=TCONS_00013568|organism=Clytia hemisphaerica|type=transcript|length=982bp|location=Sequence derived from alignment at sc0000170:259898..260879+ (Clytia hemisphaerica)
AATCGTAAATCTGATTCAACAAAAAGGAGGGTAAAAACTTTGTCTACTGA
AAGACGGTTGCTCAAGCCAGAAACTCAATATCCATCCGTGCCTGATGTTC
GAATAAAGAAGACACCTTCTGTTGAAAATTTTCGTGGTACTCttaaaaac
aagaagaaatcTCGCTCAGAAATGAAACTTTCATCAAGCTCTAAAGATGA
AAATATGGAAATTGAGGAAGAAGACAAAGTTCACACAATAATGAAATCGT
TAGCTGGTGAGGagaatgttatttttatttgtttattgaTGTTTTCTAAT
CCACTTTAAAAACCATTTTTACCACTCTAGATGACAattacaaatatctt
cattttgcgtCGCCCGACCGGCGGCTcttaaaaattgagtaaaattgagT
CGGAAAGTCAGTAAAATGGTCGGACTTTTTGTGTCGATGACGTTTCCTTC
ACTCAAAAACTTAATTATTACTAATTTTTTTACGAGTGATTCTTCTAGTT
CATTCACagcattttaactttgtttatcattacatgtgcCATTTTGTGTC
AAAGGTCACAGGTGGTCACAGTGTTTGTTCAAgggtcataatttgaaacc
atgCAATACACACGGTCGTTTTGGCTAtcgaacatttttttctttgaaaa
atggatgatggaggCCGGATGAGGGGAAGAAATTCACCTCAAATATTTGA
CTACCAAAGGGGttttaagtacctgaaaataGGACTGGTTGTTAGACTGT
TTGTTAAGGGCTGTTAAATGTCCAGCTAACAGTTGGGTctttaagataaa
aacggcaattattgctctttttgggaattattgccgaaaacggcaatttt
ttcagcGATGatatgctgaatcagcaaaaaaataaaaaactaaataaatg
aaaattgccgtctTCAGCAATTATTGCATTTTTTGGAAAgtaatttgatt
gattttattattgaacacatGGTATTTGACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013568-exon-sc0000170-1491911889:259898..260879 | TCONS_00013568-exon-sc0000170-1491911889:259898..260879 | Clytia hemisphaerica | exon |
| TCONS_00013568-exon-sc0000170-1510915933:259898..260879 | TCONS_00013568-exon-sc0000170-1510915933:259898..260879 | Clytia hemisphaerica | exon |
| TCONS_00013568-exon-sc0000170-1575043694:259898..260879 | TCONS_00013568-exon-sc0000170-1575043694:259898..260879 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000170 | supercontig | sc0000170:259898..260879 + |
Blast
The following BLAST results are available for this feature:
|
