TCONS_00013521 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013521
Unique NameTCONS_00013521
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1429

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013521 ID=TCONS_00013521|Name=TCONS_00013521|organism=Clytia hemisphaerica|type=transcript|length=1429bp
TCGAAGTTTACTAGCTCTCAGACCTCCATTGACATCCTCGCACATTATCA
AAATCGCCGCCATTTTTTACAGACTTCAAGGCTTCCAGCATCAAACACGT
TTTTCCTCTAGCAAGGAAAGAAATTCAACAGATAATGTCTGACCAAGAAA
TCAAGACAGAAGAAGCTGCACCAGCTGAAGAAGCACCTCAAGCAGAAGAA
AAAGCTGTTGATGAGGTCAAAACAGAAGAAGCAGTAGAAGAAGAAGTTAA
AGAGGAAGAATCAGAAGATGAAGTCGAATATGAATGTCCTGAAGAGTTTA
ACACACGTGAAGAAATGTGTAAGATGTTTGTCGGAGGTCTAGATAAAACC
ACGACTGATGAGGAATTCAAAGAACTATTTGCTGAACATGGAGAAATCAA
AGATTTCATAATAATTCGAaaagaaaatagtaaaagtGACAGACTATTTG
GATTTATTACATTTGCACAATGTGATGATCTCGAAAGATGTTTGTTGAAG
CGTCCACATAATTATAAAAGCAAAGAATTAGATGTTAAACGTGCTGTCCC
AAAATCATCTGGAAACGACGAACAAGGACATTATAAAGTGAAAAAACTTC
ATGTTGCCAACCTTCCACCAGATTTCAAGGTTAAAACCCTTAGGAGGTAT
TTAAAAGCACGACACTCAGAAGAGTTTGGAAAGATAGAAGATATCAACTT
TTTGACTAAGGAAGAAGGTGGCAAAACAGTTAACAAGGGCTTTGGTTTCA
TCAATGTCTCAACTGAAGATTTTGCTGATAGAATTGCAATTGGTGAAAAC
AAATTCACTTTGGACAACAATGCATTGAGAATCTCCAAAGCTAAACCAAG
AAGTCAAGGAGGCTTTAGAGGTGGTCGTGGAGGCGGCAACTTTAACAACT
ATGGAAATTACGGTGGTGGTTATAATCAAAATCAATATAACCAATATGAT
GGAGGTTTCGGATATGGGGGTGGATACGGCTACGGAGGCTACGGCGGATA
CGGTGGTGCTTATGGAGGCTACGGTGGTTATGCATATCAAGGTGGACGTG
GTGGTGGAAACAGCCGTTACAAGCCTTATTAATGAATCCAGAAAGTCGCT
TTAACTCAAACAAGCTAGTAAGCTTTTGAATGCGTCCTAAAATCAAGTCG
TAAATCGTAAATATGGTGTCATTCTGAGAATCCCTATATCTCGCTCAGTC
ATTCATTACTATCAAGTCGAAATGCGTCTACTATCCTTACATTGAGTGAA
CATCGTCAGTCTATACTTTTCCTTTCACACACTTGAAggagtaaaaaaat
taattttttattattttaatgatttttatgaaaactacgatgaaatattt
tattttggttttaatttttgtacTTTCCTATTTTCTGTGATATTACATTC
AAAAAGACATCATTCTTGGCATCAAACAT
Run BLAST on NCBI

protein sequence of TCONS_00013521-protein

>TCONS_00013521-protein ID=TCONS_00013521-protein|Name=TCONS_00013521-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MSDQEIKTEEAAPAEEAPQAEEKAVDEVKTEEAVEEEVKEEESEDEVEYE
CPEEFNTREEMCKMFVGGLDKTTTDEEFKELFAEHGEIKDFIIIRKENSK
SDRLFGFITFAQCDDLERCLLKRPHNYKSKELDVKRAVPKSSGNDEQGHY
KVKKLHVANLPPDFKVKTLRRYLKARHSEEFGKIEDINFLTKEEGGKTVN
KGFGFINVSTEDFADRIAIGENKFTLDNNALRISKAKPRSQGGFRGGRGG
GNFNNYGNYGGGYNQNQYNQYDGGFGYGGGYGYGGYGGYGGAYGGYGGYA
YQGGRGGGNSRYKPY
Run BLAST on NCBI

transcript from alignment at sc0000168:476885..492509-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013521 ID=TCONS_00013521|Name=TCONS_00013521|organism=Clytia hemisphaerica|type=transcript|length=15625bp|location=Sequence derived from alignment at sc0000168:476885..492509- (Clytia hemisphaerica)
TCGAAGTTTACTAGCTCTCAGACCTCCATTGACATCCTCGCACATTATCA
AAATCGCCGCCATTTTTTACAGACTTCAAGGCTTCCAGCATCAAACACGT
TTTTCCTCTAGCAAGGAAAGAAATTCAACAGGTATACCTCTCTTTATCCT
TGTTTTAGTTTTACGTATTCATTTACCTTTGAAAAAAGGGCGATCCGAAA
GCAGCACCACTTATTTGAAAAGCTGTTCCGTTGGGAATGGGTGACCTGTA
CTGTTCCTGAATGATATTTTCTCCCATGTCAATAAAGAACTGTTCCCTCA
AATGGAAATCTAACAAGCTAAGACTGTAAGAGATTTTCATTTTTGCTGAA
AAATCTGATGTGTTCTTCAAGGGCTATGTATGAAAGATTACAGCAGTTAG
AATTGCCAGCTATATACAAAAGGAAATCTTGATCTTTAGAGCTGTTCTGA
AGTGTGGAATGCTTACTAGAAAGACCTTTTCAGGATAACCCTGAGTCCAT
AACAAATACCGTGAGATTGGGTAACTTGCATCACAGTGGAGGCTAACATG
CATATCACGTGCGTTTGGTTTGGGAACGCGAAACACGAACGAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTATGTTTGGATTTCTAGAAAGCTTACCCATTCATTGTTAAT
ACATTTTTTATTTGAAAGTAATCTCTTCATGGAATAAAAAGATATAGTCA
AATCTTGTAGGGTTATTTTTCAAAATTTTTTTGCCAAATTCGATTTTCGC
ATTTCGCCATTTTACCCTACGCAAACGCACGTGATATATAGTCGCGCGGC
TGAGGTCGAAAAACGTTTCATTTCGTGATACATCTTTTAGATTCCAAAAA
AAACAACTGAAACTCGCGAATTAGTATGTGTAGATTACAAAATCAAAAAG
TTTCCACGATATTATCGTGCAAGTAACGAGTAAATGGCGATTTTTTGCGT
TTCCAGGCAAAATTGCAAGGCCTGGAAATTCATGATTTTTTGGGGGTCTT
CAAATTAAAAAAATACCTATATCACATGATAGAGCTCTTCAAACTGAGCA
AAAAAGTGTATTACACCAAAGTCCCAACTTCTCTAGATCAAAATTTATTG
GCCTATTTGTGGTAAAAAACTGATGGAAAACAGGGAATTTCCCCACAATC
TGCATCAATTTATGCAAAATTAAACACCTTTTCAGAATTTTCTTCACGCG
GGAGAAATCGTTGACATGCGGGAGTCTCCCGCTCAGACATGGGGGAGTCT
CCCGCTCAATGCGGGAGAGTTGACAGCTATGCAGTAGCTACAAAGTTTGC
GAGCAAACTTTAAACAGATGTTTTCAATAGATACGACCTTTCTGAACACA
AAATCATCAACCGGACAGTTTGAAAATAATTACCGGACGCGTCCGAAAAT
ATTTTCGTATTTGATGACGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGA
AGGCCCCTTATTTTGCTCTTAATAGCCTGATTTTAGCCTATATTTACCTT
ATTTTTGGGGTTTCAGAAGTACAATTTCCAACCCCCCCGGCAATTAGGTA
CCTGAGGTACCCCCCGTTTATTAAAATTTCGAAAATTTTCCAACCCCCCG
TTTATTCGAACCACCCCGTTTATTTGGCACCTAAGAGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNACTGGCCCATAGCTGGTGGGGTGGTGTAT
TTTTTAGGTTAAATTGAGTTAGTACAGTGTACTAAAAGGGTGGTCCTCTG
AGAAAAATACAATGAAAAAGCTAGTACAGTGTACTAAAAGGGTGGTCCTC
TGAGAAAAATACAATGAAAAAGCTAGTACACTGTACTAAAAAGGGTGGTG
TTCTGAATTGATACACACTGAGAAATTAGTACATTGTACTAATTTCAGTG
GTAAAAACACACAAACCCAGTGAATTCCCATGTATATTTGCCCTAATTTG
CCAGGTCCAAGCTGGTCCAAGACCTTCAAGTCAAGGTTGGTTAAGCTATA
CAAATTGGTACACTGATTTTCTCCCAATGTTTCCTGTTTACTTGATTGGA
TTTGTTTCAGAGTCGCAGCATGCGCAAGTGGAGACCGGCCTTAAGTACAA
TCTTGATTATGTTTTCTTTAATCTATCTACATTGTGGCAACAACAAGAAT
TTGAATGTGTAAACGTTCGAATCGAAGCTTTCAAGTTTTATGAAAACAAA
TCCGCTCTATTGTTTTATGTTTTTTAGTAACCTTGTTGGATTGTTAATTG
AAAAAAATCTGTATATAAGTGAAATCACCGGGGGGAGGGGGTGAAAACGA
CCGTGCGTTCGGCCAAAAATCAGGTCTCTAAAATCGGTCCCTTACAGTGC
AGGCAAAATTTGGCTGTAAATTGACCCTTATAGTGTAATTTTTCGAAATT
TTTTGCCCTTTTCAGGGCAAAGTTTTTTGAAATTTCTCAAATTTTTACCT
CAAAATTTGGTATTTTATAAAATTTTACCCCCTTACAGTGCACTTTTTCC
CACTTGCTCACAAATCAACCCTTACAGTGCACTTTCCAAAGTCCAAAAAA
CCTACCCTTAAGGGCCGCACGTCTGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGCCCTTTCCCGGGGGGCCCCCCCC
CCCCCCGGGAAAAGCACCTTTTTATATATTTTGTATAATATTACATTTGA
TAAAAGATTTTCCATTTCAGTTTGTGTACAATGGGCTCTTCCAGAAAAAA
ATTGCACATGGGGTGTGGAGGATATAACAATTTTTAGTGATTTACCCCCC
GAACAGGGTGACTTTTGGCCCCCCGGACAATAGGTTTTACCCCCGGACAA
TAGGTTTTACCCCCAGACAAGCATCTGCTGACCCCCCGGACACCCCAAAT
TACCCCCAGACAGAGCAAATTTACCCCCTGGACAAGGCAAATTTTGATGA
TTTTTTGCTACCCCCCGGACAAAATATCCTCCACCCCCCATGTACGAATG
TTTTCTGGAAGAGCCCAATGCTAATAAGTCTTTTATTTTTATTTTTCGAA
AAAGAAAAACTGCTACAGCTTGCCAGACAACCAGAAATCAAGTCGCAAGA
AGGGAAATAACTCAAAGTTGGTTTTGAGTGTTTTGACATGCTAATTTCAG
CTAATTTGACTGTATTTGATTGACTTTGCTTTGTCTGTTTCATTGTTTCA
GTGTTTGTACTACTGTATATAAGGATTCAAGTATTTTAATATTCAAATCT
TTCCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCTGGCTAAGAAGAAATTAGAACAGTGCACTATAAGGGGTG
GTTTCTAAACTTATCTGATCGAAAAAACAGCTAATACAGTGTACTAAAAG
GGTGGTATAAAAAATCCGGTCATGGAGAAAAGGTGGTAATAAAAATCTAG
TTGTGGAAAAATGTCAGTACAGTGTACTAAAAGGGTGGTATCAAAGCTCC
GGCTGTGGAATAAAGTTAGTACAGTGTACTAAAAGGGTGGTGTCAAAGCC
CCAACCGTGAAAAAAGGTTAGTACAGTGTACTAAAAGGGTGGTGTCAAAG
CCCCGACCGTGAAAAAAAGTTAGTACAGTGTACTAAAAAGGGTGGTGGTC
TAATTTTTTGGAAAAAAATCCAAAAATCAAGTTAGTACCCTATGGTCCAG
TACACTGAATTGGTACCCCCCCTGGTTACGGCCATAAAGGAAAAGCGTTC
TAACTTTTTATAGCAAAATTTTCAGATATGGTTACTGACCATTTTCTTAA
TCTACGTTAAAAAAGGCTTCAATCGGTATATAATATGTCTATGTTGGTTC
TCAAAATTTTTTCAGTTAGCCTATGGGCACGCATGACGTCATCAGGTACT
AAAACCGGTAAGTAATTTCAACAACCCCGGTTGATGGTTTCTAGATATTT
AGGTTGTATATTTTCAATTAAAAGTGGTTTGGGATTGTTCGCACTCCGTC
CAATTTTTTTGTGACCTCAGCTGCCTGTCTAATAGCCCTCAAATGAAAGA
CCTGGCTGGTCATTAAAATACAACTACGCAGCTCTGCTCGCAGCTCTACT
CTACCATTTTTGTTTTGATTTAATTTTGTATTTAAATGACCAGCCAGGTC
TTTCATTTGAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCAA
TTTTACGGTAGTTTGTGGCTTCTTCACAACTGTGAAAGACACATCTGGAC
TTATTTTATACTTTTCCGTCTTACCTATTTTATCTTTTCCTTTAGGCAGC
AATCACAAATATCTTCGTTTCGCGTCGCTTGACCGACTCTCGAAAATTGA
GTAGAATTGAGTCTGTGATAGGGTGCGCACTCGTCAAGATTTTTTGCGAG
GAACGAGGAAGAATTTACAAAAATGAACTTCAATGCATTAGTACTTACCT
TTAAATCAACCAAATCATTCTTTTTTTTAAATCAATCAGGAATTATCAGG
GAAACAAGTAAAAAAAACTGCATCCAGGTATCTATTTTCGTTCCAAAGAT
ATTCATGTTCGACGTTAAGTTGAAAACGCGATTTAGTGCTGACCACGGCA
CCGGAAAATTCTCGACCCACATGGAAAACACATGGCTGTCGCTATTGAGC
TGGTTCATCTTTTCAATTGCGGTTTTTTTAGTAAACCCAGGGTAAGATTA
GGCTACAATCTATCACAAAGTGCTTTATTTGAAAATCTACAGGCCGTCTG
GAATTTCGAAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGCTAT
CATTTCCAGCTCATTAGCGATAAGCTAAAGTTTAACAGTCATCGGGCCGA
TTTTCAGACCGCACCGGCAAAACTCCCCACACCCCGCCACACAAAGACTA
GATTTCATCCGCCATTTTTGGCGCGATTTTGGTGCTTCCGGAAATTATTT
CTTGCTGGCGTGGTGTAAGGAGGCAATTCTTTAAAAAGGTGATTTTTTTG
TGTTTTGAAAATGGAATAACTTTGAGAATACTTAAACCAATTCTAATATA
AATGACCCCTCATTTTTCTCACAAAGGTAAGGACTTTCAAATAAAATTAG
TTTGGTTTCTTAAATTGAAGGGAAAATTTTGCTTTGGTGAGTCTGTAAAT
TTGTCTTGACTTTTTATGTCAATGACCTTTCCTTTGTTCAAAAATTTTAT
TATTGCCAATTTTTTGCGAGCAATTTCTAGGGCATTTGCAGCATTTTGAC
TTTGTTTATCATTACATGTGCCATTTTGGGGTCGAGAGGTCACAGTGTTC
AAAGGTCATAATTTTAAACCACCTATTACACGCGGTTGTTTTGGCTGCTG
GCTGGCTGGAAGTTTCCTCCAAGAATGCACACCAAAAATGGATGGAAAAA
TGGAAACCCAAAAATTTTTTACGAATTACGTAAGGCGGCAATCACAAATA
TCTTCATTTCGCGTCCTCGTTGGGTCTAAAACGTGAGTCGGTCGGTGGTA
AAAGTTTTCGGGTTTTCATCCATCCATCATCCATTTTTGGAGTGTATTCT
TGAAGGAAACTGTCAGCCAGCCAGCAGCCAAAACAACCGCGTGTTATGGG
TGGTTTCAAATTATGACCTTTATGCACTGTGGACCCCCAACCCCGCGAAA
CGAATATATTTGTGATTGCCGCCTAATGGAAATGGGGGTTGCACAAACCC
CTGTAACAATGGGGGAGCACCCCGTTGCTAAGATGTTGGCTTTAGTCCGG
CGGCGATCCAGGATCACCCTTACAATTAGTAAATATGGGTTTTTATTTTA
TTTTCCCATTATATGGTCCCTTGGGACCCCAAAACCAGTTTTTGCCAAGC
TGGCAAAGCTGGGGAAAATTTTTTATGGGGGCTTGAAGGGGGTAGGGTCA
TTTTAGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNATTTTGGTATCGATACCAACTCGACTT
TTTGAAATTTGAAAAAAAAAATTGACACCACCCCCCGGCCCTGGGTTTGG
TATCTGGATCCTGACCCCCCCCTGCTATATGATGGCACAATCAGTTTTAG
CTAAATGAGAACTTCAAAAATCGACTTAAGGACCCCCAGGCTAAAATGAC
CCTACCGACTTCAAGCCCCCATAAAAAATTTTCCCCAGCTTTGCCAGCTT
GGCAAAAACTGGTTTTGGGGTCCCAAGGGACCATATAATGAGAAAATAAA
ATAAAAACCCATATTTACTACTTGTAAGGGTTGATGCAAAAAAGCCCTTT
TCGCTGAAACCACTGAAAACAAAAGTAAAATCTGCCCGTTCTTGAAATCC
CTTAATCTTGATATACGAGTTTATACTGTTTGTTTATAGTTTTTTTCTGA
TTTTTAGGACTTATATTTTCTGTTTCGAACAGTTCAGTGATCAAAATAAG
CTTTTTCATTGTGGTTGGTTATTTTAGAGAATCACTCATGTGTCACCCGA
AAGGCTAAGGGACAGGAGGAAATTATGAAAATTTGCCCCTCGTTATTGGC
TTAAAGTTATCTCATTTTTAATGACGTTAATCATTGATGAACCTTTTGAA
TGAAAGAAATTTAAGCTAGATGGCAATGCAGAGTAAATTACTTTTTCTTT
AGGATGTTTTGAAAAAAAGTACAAATCTTAAATTATGTAATGTATGTAAG
TTTTCTCAAAGCGTATTATTCAGTGCTGCAAATAAGGAATTTCAAGTTGG
CCGGTGATTACTCAATCAGAAAGCACTAACAATGAAACCATCAAAATTTC
ACGAGAAAAAACACACATATTAGCTTAAAAATGACCGGTAATTACCGGTC
ACCGGCCGTTATTTGCAGCACTGTTATTTGCAGTTTCTTCAAGATTTGAA
GTTTGAAAAGAGCAATTTTATTTTTATTTTTTTCCATCCTCTGGTTCAAA
AGATCATCTTCAAATGTCCGTAAATCAGAAAAATAAAAAATTACTGTACT
TGCCCAAATAATAAAAGAATTATTACAGTTTTTCTCTTTAGAAGACTATA
CGAATGCCCAGAGAGTATTTCAAGACACAAAAGGTTTTGCATCAAAAATT
ATCATCTTTCAAAAGGAAAAATCACAATTGCTCACTTGAGATACATTTTA
TCCACAAAAAATCACATCAGCTGAAGCCATAATTTTCACTGAACCATCTA
GGAAAAAAATATTTGGAAAATCTTTTGCAAGTTTTTTACACTGGCTGTTT
CTAATGACCTCAGTATAGTTAGCCACATTAGATATAATTATTAGCCACGA
TTTTTCACGCTTTGGGCTGATATATTTAGCCAATAGGTTAACCTAGAAAA
TTACTTGTTTTTGCTTCGAAATATTTGATTTATTCCCTTCAACAAGTTTT
AATCTTTTTGATAGCCACAATTTATCACATTTTTATGGAGCTTTCAAAAA
GTGTCATGGAAAATACAAAAATGTCCTTTCCTGTGGAAACTAATCTAATT
TAGACATGATATAGGAGTACTGAGAGCTACAATGTTCTTTGTGTGCACAG
ACTTTAACTTTTTTTAAATGATCAATTAGACCTAATTAAACAGAACAAAA
AATTTTACTACAAAAAACCTTGAATTTTACTTGATAGGAAATTATGACTT
AATTATGCCTTGACTCAATTTTTTCGAGCCTGTGGGCATCCCCAAATCTT
TTGCAGGCAAACTTAATGTATTACAACTTTTCTCAGGATTGAATCATAGG
AATCTTGATTTTTGGTACAATATCAAACGTGCAAAATGGTGGCTAAAATG
TGACGGAGCCCGATTTTCGAGAAACATTTTTTCTGGCCGAAAATGCCAGA
AATCTGCCAGAAAAACCGGTTTTTTGACATTTTCTCGAATTTTCATCCTT
GTTTTTTTTTTATATTTTGCACAGGGGGGGGTGAAGCAGTTAGTACAAGA
CATCATGCCTACTAACTGCTTTCTCGGAAGAAGTTAGTAACACCACCACC
TTGGTACACTTAGTACAGTTAGTACTAACTGAATTTAGCCTTGAAAAAGG
CTTTTGACCTTCATAAATTCAATAAAATAAAATAAAATAAAATTTAATAT
CTTAAAAATGATTCAATTTTCCATAGCTTTCAATAGGAAAAAACAACATT
TTCGAAAATCAAATTTCTATTCAACCAGCAAATTGTTTTTAAGATTTAAA
AAAAAAATTTCGAAAATTTGAAAAAAAACCTACTTCCCAAAAAATTTTTT
TGTAAAATATGGTCTTTTTTTTTTAATTTTCTCACAAAATCCTATTTTTT
ACACAGTTAGTACCAAAATGNGCATGTTTCAATTTTCAATAAAATTGATA
TTTGAAGCCGGAACTATTTAAAAATCGCTGGAACAACCTATTTTCGCCGG
TAAGACAGTATTTCTTGAATTTCTCGAGCTTCACATTATATTTTTTTATG
AAATTTTGCACACTGATGCAAAATGACAATACCTAAAATGTGATGGAGCC
CGATTTTTGAAAAACATTCTTTTTCAGGCCGAAAATGCCGGAAATATGCC
GGAAAACCCGTTTTTTTGACATTTTCTCGAATTTTCATCCTTAGTTTTTT
CTGATGTTTTGCAGAAAGATGCGTATTAGCAATACTTAAATTATGGCCGA
GTCCAATTTTCGAGAAAAATTATTTTCTGGTCTGAAATGCCCGGAAATGT
GCCGTTTTTGCTGATTTCATTGGACTTTTTCCTGATATTTCTTCTTTTTT
TTCACGCAAAACCATTATATGCCACCATCAAGCATGATTCATATGTTAAT
AAAACTGATTTTTATAGCTGGGACTTTCTAAAAATTGCAGGAACAGCTGA
GAATTGCCAGAAAAACAGTTTTTCATGAATTTTTCAAAANTGAACCACCA
TTGTAGTTAGTGCAGGTTCAAAAAATTTATAAATAGGAGGGAAGGGATGT
ATATACACTATGAGTTTAAAAGACTTAAAAAATAATCAAGATATTGGTAG
ATTTGAAATCCTCTTCTACTTTAATGGGATAAACTTTCAGGACTTAATTT
CGCGCGTGGCACTATTGGGTGGCAATATTTTCACGATTTTGTGACTTTTA
CTGTCAAATCATGCATGTTGGTTGTTGAAATATACATTATTTGCGCTTCT
TTGATGCCCTTAAACATTCAAATAGTATTTGTTTGACATATTTTGAGTTT
TGTTTAGAAATATTTCACGGATGAGGCCCTTCCAAATTTCCATTGGGAAA
TTTCAATTTCCACAAAATTTAATCCCTGCAAAAGTTTATCCCATTAAAGT
AGGGTATCTGGGATTCTGTTTTTATCTAAGTTCCCTTATTTTTAATCCAT
AGATAATGTCTGACCAAGAAATCAAGACAGAAGAAGCTGCACCAGCTGAA
GAAGCACCTCAAGCAGAAGAAAAAGCTGTTGATGAGGTCAAAACAGAAGA
AGCAGTAGAAGAAGAAGTTAAAGAGGAAGAATCAGAAGATGAAGTCGAAT
ATGAATGTCCTGAAGAGTTTAACACACGTGAAGAAATGTGTAAGATGTTT
GTCGGAGGTCTAGATAAAACCACGACTGATGAGGAATTCAAAGAACTATT
TGCTGAACATGGAGAAATCAAAGATTTCATAATAATTCGAAAAGAAAATA
GTAAAAGTGACAGACTATTTGGATTTATTACATTTGCACAATGTGATGAT
CTCGAAAGATGTTTGTTGAAGCGTCCACATAATTATAAAAGCAAAGAATT
AGATGTTAAACGTGCTGTCCCAAAATCATCTGGAAACGACGAACAAGGAC
ATTATAAAGTGAAAAAACTTCATGTTGCCAACCTTCCACCAGATTTCAAG
GTTAAAACCCTTAGGAGGTATTTAAAAGCACGACACTCAGAAGAGTTTGG
AAAGATNATTTCGCGCGTGGCACTATTGGGTGGCAATATTTTCACGATTT
TGTGACTTTTACTGTCAAATCATGCATGTTGGTTGTTGAAATATACATTA
TTTGCGCTTCTTTGATGCCCTTAAACATTCAAATAGTATTTGTTTGACAT
ATTTTGAGTTTTGTTTAGAAATATTTCACGGATGAGGCCCTTCCAAATTT
CCATTGGGAAATTTCAATTTCCACAAAATTTAATCCCTGCGAAAGTTTAT
CCCATTAAAGTAGGGTATCTGGGATTCTGTTTTTATCTAAGTTCCCTTAT
TTTTAATCCATAGATAATGTCTGACCAAGAAATCAAGACAGAAGAAGCTG
CACCAGCTGAAGAAGCACCTCAAGCAGAAGAAAAAGCTGTTGATGAGGTC
AAAACAGAAGAAGCAGTAGAAGAAGAAGTTAAAGAGGAAGAATCAGAAGA
TGAAGTCGAATATGAATGTCCTGAAGAGTTTAACACACGTGAAGAAATGT
GTAAGATGTTTGTCGGAGGTCTAGATAAAACCACGACTGATGAGGAATTC
AAAGAACTATTTGCTGAACATGGAGAAATCAAAGATTTCATAATAATTCG
AAAAGAAAATAGTAAAAGTGACAGACTATTTGGATTTATTACATTTGCAC
AATGTGATGATCTCGAAAGATGTTTGTTGAAGCGTCCACATAATTATAAA
AGCAAAGAATTAGATGTTAAACGTGCTGTCCCAAAATCATCTGGAAACGA
CGAACAAGGACATTATAAAGTGAAAAAACTTCATGTTGCCAACCTTCCAC
CAGATTTCAAGGTTAAAACCCTTAGGAGGTATTTAAAAGCACGACACTCA
GAAGAGTTTGGAAAGATAGAAGATATCAACTTTTTGACTAAGGAAGAAGG
TGGCAAAACAGTTAACAAGGGCTTTGGTTTCATCAATGTCTCAACTGAAG
ATTTTGCTGATAGAATTGCAATTGGTGAAAACAAATTCACTTTGGACAAC
AATGCATTGAGAATCTCCAAAGCTAAACCAAGAAGTCAAGGAGGCTGTAA
GTATTAAGTTTTGGATACTTTAGAAGAATTTCTTCAAAAGACATGCGTCA
GGGAAATATTACCTTCAAATGCAACAAGAAGAAAATCAGAATCTCTGTAT
ACCTTAAATATATGTAATCGTCAGCCGTGCAAAATTACTCGAATCTGATT
GGTTTAGAGGAGTGCGATTAATCGTTAATTGCACTATTACCACTTTTTGC
ACTCTTCGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCAGGAAATTCTGTTTGGAACCTAATTCTAGAATAATA
TCCATCATTTGACTCCTGTCTTTCAAATTTCAGTTAGAGGTGGTCGTGGA
GGCGGCAACTTTAACAACTATGGAAATTACGGTGGTGGTTATAATCAAAA
TCAATATAACCAATATGATGGAGGTTTCGGATATGGGGGTGGATACGGCT
ACGGAGGCTACGGCGGATACGGTGGTGCTTATGGAGGCTACGGTGGTTAT
GCATATCAAGGTGGACGTGGTGGTGGAAACAGCCGTTACAAGCCTTATTA
ATGTAAGTTTACTTTTATTCAACCTATATTTGCAGCAAAGTCGACAAAAT
CAAATGGGTTTTTGAACTTTACCTCGAGTTTAAGGCAGCACTTTTTGTAT
GGTTTTTGAGCGTTCGCTTTCTCGTGTTATAAAACTTTTGTTCTCGTTGT
GCTCATTTGTAGATTGTTATTCATTCTTGTCTAACATTGTATTTTCTATT
GCAGCAACAGGTAAGTATACAAGTGAAAGAACAGTACTAAACCTCATTTC
TTGATTTTCACATCCAGGAATCCAGAAAGTCGCTTTAACTCAAACAAGCT
AGTAAGCTTTTGAATGCGTCCTAAAATCAAGTCGTAAATATGGTGTCGTT
CTGAGTGTCCCTATATCTCGCTCANCTTTTGAATGCGTCCTAAAATCAAG
TCGTAAATATGGTGTCATTCTGAGAATCCCTATATCTCGCTCAGTCATTC
ATTACTATCAAGTCGAAATGCGTCTACTATCCTTACATTGAGTGAACATC
GTCAGTCTATACTTTTCCTTTCACACACTTGAAGGAGTAAAAAAATTAAT
TTTTTATTATTTTAATGATTTTTATGAAAACTACGATGAAATATTTTATT
TTGGTTTTAATTTTTGTACTTTCCTATTTTCTGTGATATTACATTCAAAA
AGACATCATTCTTGGCATCAAACAT

Coding sequence (CDS) from alignment at sc0000168:476885..492509-

>TCONS_00013521 ID=TCONS_00013521|Name=TCONS_00013521|organism=Clytia hemisphaerica|type=CDS|length=2844bp|location=Sequence derived from alignment at sc0000168:476885..492509- (Clytia hemisphaerica)
TTAGAGGTGGTCGTGGAGGCGGCAACTTTAACAACTATGGAAATTACGGT
GGTGGTTATAATCAAAATCAATATAACCAATATGATGGAGGTTTCGGATA
TGGGGGTGGATACGGCTACGGAGGCTACGGCGGATACGGTGGTGCTTATG
GAGGCTACGGTGGTTATGCATATCAAGGTGGACGTGGTGGTGGAAACAGC
CGTTACAAGCCTTATTAAGTCAAAACAGAAGAAGCAGTAGAAGAAGAAGT
TAAAGAGGAAGAATCAGAAGATGAAGTCGAATATGAATGTCCTGAAGAGT
TTAACACACGTGAAGAAATGTGTAAGATGTTTGTCGGAGGTCTAGATAAA
ACCACGACTGATGAGGAATTCAAAGAACTATTTGCTGAACATGGAGAAAT
CAAAGATTTCATAATAATTCGAAAAGAAAATAGTAAAAGTGACAGACTAT
TTGGATTTATTACATTTGCACAATGTGATGATCTCGAAAGATGTTTGTTG
AAGCGTCCACATAATTATAAAAGCAAAGAATTAGATGTTAAACGTGCTGT
CCCAAAATCATCTGGAAACGACGAACAAGGACATTATAAAGTGAAAAAAC
TTCATGTTGCCAACCTTCCACCAGATTTCAAGGTTAAAACCCTTAGGAGG
TATTTAAAAGCACGACACTCAGAAGAGTTTGGAAAGATAGAAGATATCAA
CTTTTTGACTAAGGAAGAAGGTGGCAAAACAGTTAACAAGGGCTTTGGTT
TCATCAATGTCTCAACTGAAGATTTTGCTGATAGAATTGCAATTGGTGAA
AACAAATTCACTTTGGACAACAATGCATTGAGAATCTCCAAAGCTAAACC
AAGAAGTCAAGGAGGCTATGTCTGACCAAGAAATCAAGACAGAAGAAGCT
GCACCAGCTGAAGAAGCACCTCAAGCAGAAGAAAAAGCTGTTGATGAGTT
AGAGGTGGTCGTGGAGGCGGCAACTTTAACAACTATGGAAATTACGGTGG
TGGTTATAATCAAAATCAATATAACCAATATGATGGAGGTTTCGGATATG
GGGGTGGATACGGCTACGGAGGCTACGGCGGATACGGTGGTGCTTATGGA
GGCTACGGTGGTTATGCATATCAAGGTGGACGTGGTGGTGGAAACAGCCG
TTACAAGCCTTATTAAGTCAAAACAGAAGAAGCAGTAGAAGAAGAAGTTA
AAGAGGAAGAATCAGAAGATGAAGTCGAATATGAATGTCCTGAAGAGTTT
AACACACGTGAAGAAATGTGTAAGATGTTTGTCGGAGGTCTAGATAAAAC
CACGACTGATGAGGAATTCAAAGAACTATTTGCTGAACATGGAGAAATCA
AAGATTTCATAATAATTCGAAAAGAAAATAGTAAAAGTGACAGACTATTT
GGATTTATTACATTTGCACAATGTGATGATCTCGAAAGATGTTTGTTGAA
GCGTCCACATAATTATAAAAGCAAAGAATTAGATGTTAAACGTGCTGTCC
CAAAATCATCTGGAAACGACGAACAAGGACATTATAAAGTGAAAAAACTT
CATGTTGCCAACCTTCCACCAGATTTCAAGGTTAAAACCCTTAGGAGGTA
TTTAAAAGCACGACACTCAGAAGAGTTTGGAAAGATAGAAGATATCAACT
TTTTGACTAAGGAAGAAGGTGGCAAAACAGTTAACAAGGGCTTTGGTTTC
ATCAATGTCTCAACTGAAGATTTTGCTGATAGAATTGCAATTGGTGAAAA
CAAATTCACTTTGGACAACAATGCATTGAGAATCTCCAAAGCTAAACCAA
GAAGTCAAGGAGGCTATGTCTGACCAAGAAATCAAGACAGAAGAAGCTGC
ACCAGCTGAAGAAGCACCTCAAGCAGAAGAAAAAGCTGTTGATGAGTTAG
AGGTGGTCGTGGAGGCGGCAACTTTAACAACTATGGAAATTACGGTGGTG
GTTATAATCAAAATCAATATAACCAATATGATGGAGGTTTCGGATATGGG
GGTGGATACGGCTACGGAGGCTACGGCGGATACGGTGGTGCTTATGGAGG
CTACGGTGGTTATGCATATCAAGGTGGACGTGGTGGTGGAAACAGCCGTT
ACAAGCCTTATTAAGTCAAAACAGAAGAAGCAGTAGAAGAAGAAGTTAAA
GAGGAAGAATCAGAAGATGAAGTCGAATATGAATGTCCTGAAGAGTTTAA
CACACGTGAAGAAATGTGTAAGATGTTTGTCGGAGGTCTAGATAAAACCA
CGACTGATGAGGAATTCAAAGAACTATTTGCTGAACATGGAGAAATCAAA
GATTTCATAATAATTCGAAAAGAAAATAGTAAAAGTGACAGACTATTTGG
ATTTATTACATTTGCACAATGTGATGATCTCGAAAGATGTTTGTTGAAGC
GTCCACATAATTATAAAAGCAAAGAATTAGATGTTAAACGTGCTGTCCCA
AAATCATCTGGAAACGACGAACAAGGACATTATAAAGTGAAAAAACTTCA
TGTTGCCAACCTTCCACCAGATTTCAAGGTTAAAACCCTTAGGAGGTATT
TAAAAGCACGACACTCAGAAGAGTTTGGAAAGATAGAAGATATCAACTTT
TTGACTAAGGAAGAAGGTGGCAAAACAGTTAACAAGGGCTTTGGTTTCAT
CAATGTCTCAACTGAAGATTTTGCTGATAGAATTGCAATTGGTGAAAACA
AATTCACTTTGGACAACAATGCATTGAGAATCTCCAAAGCTAAACCAAGA
AGTCAAGGAGGCTATGTCTGACCAAGAAATCAAGACAGAAGAAGCTGCAC
CAGCTGAAGAAGCACCTCAAGCAGAAGAAAAAGCTGTTGATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007549XLOC_007549Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013521-proteinTCONS_00013521-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013521-exon-sc0000168-1575043694:492379..492509TCONS_00013521-exon-sc0000168-1575043694:492379..492509Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1575043694:480074..480157TCONS_00013521-exon-sc0000168-1575043694:480074..480157Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1575043694:478564..479212TCONS_00013521-exon-sc0000168-1575043694:478564..479212Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1575043694:477558..477776TCONS_00013521-exon-sc0000168-1575043694:477558..477776Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1575043694:477222..477292TCONS_00013521-exon-sc0000168-1575043694:477222..477292Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1575043694:476885..477159TCONS_00013521-exon-sc0000168-1575043694:476885..477159Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1510915933:492379..492509TCONS_00013521-exon-sc0000168-1510915933:492379..492509Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1510915933:480074..480157TCONS_00013521-exon-sc0000168-1510915933:480074..480157Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1510915933:478564..479212TCONS_00013521-exon-sc0000168-1510915933:478564..479212Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1510915933:477558..477776TCONS_00013521-exon-sc0000168-1510915933:477558..477776Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1510915933:477222..477292TCONS_00013521-exon-sc0000168-1510915933:477222..477292Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1510915933:476885..477159TCONS_00013521-exon-sc0000168-1510915933:476885..477159Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1491911889:492379..492509TCONS_00013521-exon-sc0000168-1491911889:492379..492509Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1491911889:480074..480157TCONS_00013521-exon-sc0000168-1491911889:480074..480157Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1491911889:478564..479212TCONS_00013521-exon-sc0000168-1491911889:478564..479212Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1491911889:477558..477776TCONS_00013521-exon-sc0000168-1491911889:477558..477776Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1491911889:477222..477292TCONS_00013521-exon-sc0000168-1491911889:477222..477292Clytia hemisphaericaexon
TCONS_00013521-exon-sc0000168-1491911889:476885..477159TCONS_00013521-exon-sc0000168-1491911889:476885..477159Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168supercontigsc0000168:476885..492509 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
218.767	214.257	461.767	449.193	699.304	480.434	448.858	464.521	279.683	272.935	300.469	347.514	296.647	291.735	262.781	298.4	247.682	269.69	81.9837	96.9355	329.049	329.694	272.354	258.299	171.037	191.772	217.969	222.078	189.554	200.132
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
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BLAST of TCONS_00013521 vs. Swiss-Prot (Human)
Match: ROA2 (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.155e-23
Identity = 57/182 (31.32%), Postives = 96/182 (52.75%), Query Frame = 3 
Query:  306 REEMCKMFVGGLDKTTTDEEFKELFAEHGEIKDFIIIRKENSKSDRLFGFITFAQCDDLERCLLKRPHNYKSKELDVKRAVPKSSGNDEQGHYKVKKLHVANLPPDFKVKTLRRYLKARHSEEFGKIEDINFLTKEEGGKTVNKGFGFINVSTEDFADRIAIGENKFTLDNNALRISKAKPR 851
            +E+  K+F+GGL   TT+E  +  + + G++ D +++R   SK  R FGF+TF+   +++  +  RPH+   + ++ KRAV +        H  VKKL V  +  D +   LR Y      EE+GKI+ I  +T  + GK   +GFGF+     D  D+I + +   T++ +   + KA  R
Sbjct:   17 KEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF-----EEYGKIDTIEIITDRQSGK--KRGFGFVTFDDHDPVDKIVL-QKYHTINGHNAEVRKALSR 190
The following BLAST results are available for this feature:
BLAST of TCONS_00013521 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ROA21.155e-2331.32Heterogeneous nuclear ribonucleoproteins A2/B1 OS=... [more]
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