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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013515 ID=TCONS_00013515|Name=TCONS_00013515|organism=Clytia hemisphaerica|type=transcript|length=332bp
TTCGACATTTTGAACGAAAACAATCCTTTTACACTGGTGCTATGACTAGC
CTGAGTCTGGATGCAGTACGAACGATTGATCAGAAGCTAGTGCTGATACC
TATTTGCTACATCATGTTGAGGATCTGGGGAACAATTCGTTTTCTGATGT
ATGTCCTTGGAAAGGAGCAGCATGGCTCTCTTCCTTTCCTGATGATAATG
CAGAAGAAGGAAACTGAAACTCATCATCCAGTGAGTGAAAGAACTAATCT
CATTTGAGCTCTGGCCGTCTAAAAGAATCTTGATTTGAAGGAAGTAAATC
GCATCAAATTCATCTTTGTTTGTCTAGCTATT Run BLAST on NCBI transcript from alignment at sc0000168:445256..446629- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013515 ID=TCONS_00013515|Name=TCONS_00013515|organism=Clytia hemisphaerica|type=transcript|length=1374bp|location=Sequence derived from alignment at sc0000168:445256..446629- (Clytia hemisphaerica)
TTCGACATTTTGAACGAAAACAATCCTTTTACACTGGTGCTATGACTAGC
CTGAGTCTGGATGCAGTACGAACGATTGATCAGAAGCTAGTGCTGATACC
TATTTGCTACATCATGTTGAGGATCTGGGGAACAATTCGTTTTCTGATGT
ATGTCCTTGGAAAGGAGCAGCATGGCTCTCTTCCTTTCCTGATGATAATG
CAGGTAATTTTTTATCCACTTGTCTTTTTATAAGAACCATCAACTTCTGA
ATAAGCCTCAGTTATTCTTATATTTTCGTGATTTTTGGGCTTTCGTTATG
TTTTTTTGATTAATGCTTTTTGTACTGATTTAAGAGTTCGTATTCTGAAA
ATTGAAATCACATTTTGTTAATGTAACCTTAATATTTATTGGATAAGCCA
GTTTTCTGTAAAATTTTCTTTTAAAAAATAAGTGTGTTACTCAAGATTAT
AGTTCCAACGAGAGAGCCCGAAAAACCTCCATAATGTACAGGGATCCTTT
CAACTTCGTGTTCCGTGTTCTTCGTGCTCGCAGAGCTTTTGGTTACACGA
GGAAAATAAGTACGTGGCCGCTATTTGGGGTTCAGTGTTATCAAGAGTGC
AATTGCCAAAATAAAGTTTTTCGTTTCACCTTTTTTAGGCAATTGGTGAC
AATCTGGTGGGGTTTTGTAATTGTATTTTCTTTTGTTTCTTGACACCAAA
AGTACGAAATCATATCAAGCAATCGAAACTTTGTACTCTTCACTTTAAGA
AGAAGGAAACTGAAACTCATCATCCAGTGAGTGAAAGAACTAATCTCATT
TGGTAAACACTTATTTCATCATTTTCTTAACTTATACACTTATCAACCCT
GTAAAGCGTTAGGAGACTTGGGTCCAGTTTACCAAGAAGGAAATGGCGTC
AAAATTCCCGAACTCGTTACAATGAAATTCTCACAGACACAGGATTCTGA
CGTCATTTCCTTGGGAATTAATCACCAGTCTCCTCAAAACCCGACCGCGT
CGTCAAGAAGGGCTGGTGAGTGTATTCTAAAGGTTTAATGAGTTTTTGAA
TTTTTCGCCTATCACCAGAAATCCAAACAAAGCTTCATCCTTTCTGTGCC
TGACCTGATTTACAGCAAAAAAAAACACGGATATTAAGTTCAAACTAAAA
ATATATGAATCAAACGCCCTGATCAGGAGCTAGAACTCAGACCTCTGTAC
CTTATACGCAAGGTGTTAGCTATGAACGAAGTATTTGGTATACTATAGTC
GTGAATAACTCGATTGATTTTTACATGAATTTTATCATATTTTTATAGAG
CTCTGGCCGTCTAAAAGAATCTTGATTTGAAGGAAGTAAATCGCATCAAA
TTCATCTTTGTTTGTCTAGCTATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013515-exon-sc0000168-1575043694:446427..446629 | TCONS_00013515-exon-sc0000168-1575043694:446427..446629 | Clytia hemisphaerica | exon |
| TCONS_00013515-exon-sc0000168-1575043694:445828..445880 | TCONS_00013515-exon-sc0000168-1575043694:445828..445880 | Clytia hemisphaerica | exon |
| TCONS_00013515-exon-sc0000168-1575043694:445256..445331 | TCONS_00013515-exon-sc0000168-1575043694:445256..445331 | Clytia hemisphaerica | exon |
| TCONS_00013515-exon-sc0000168-1510915933:446427..446629 | TCONS_00013515-exon-sc0000168-1510915933:446427..446629 | Clytia hemisphaerica | exon |
| TCONS_00013515-exon-sc0000168-1510915933:445828..445880 | TCONS_00013515-exon-sc0000168-1510915933:445828..445880 | Clytia hemisphaerica | exon |
| TCONS_00013515-exon-sc0000168-1510915933:445256..445331 | TCONS_00013515-exon-sc0000168-1510915933:445256..445331 | Clytia hemisphaerica | exon |
| TCONS_00013515-exon-sc0000168-1491911889:446427..446629 | TCONS_00013515-exon-sc0000168-1491911889:446427..446629 | Clytia hemisphaerica | exon |
| TCONS_00013515-exon-sc0000168-1491911889:445828..445880 | TCONS_00013515-exon-sc0000168-1491911889:445828..445880 | Clytia hemisphaerica | exon |
| TCONS_00013515-exon-sc0000168-1491911889:445256..445331 | TCONS_00013515-exon-sc0000168-1491911889:445256..445331 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168 | supercontig | sc0000168:445256..446629 - |
Blast
The following BLAST results are available for this feature:
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