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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013154 ID=TCONS_00013154|Name=TCONS_00013154|organism=Clytia hemisphaerica|type=transcript|length=2281bp
GAACTATATAACGAGTAGAGGAACAGCTTTTAATAACACTCGAGAGTTAA
AAGTTGTCTTATATGAAAAcgtttgaaattttgtttcagAGCGAGAAAAG
TCTTATTGAGTATGGAAAACTACTTCAAGACGGCAACGTGGGTCATGAAA
CATGATTGTTGGTTTGAGTATCTGCGTCAAAGTCATCAATTACAACAACA
GCTCACTACTTACTTTCAAAGgcaTTCAGCTGCAATTACAAGCTACGATT
ATTTCCCAACGGCATCCAGTCACGTCAGTGTTGGAAGTCACCCTGGTGAT
TACAAGAAGCAGCCTAGCAGTTCAATGGAAGACTCCCCTGTAGTGTGTCT
ACCTCCAACTCTCATTGTCAACGAACGAGTGAGTAACAGTGACAAGTCTT
CAGAGCTATCAGAAGAAAGATTATGCGCCATCTGCAGTGATCGGTCTACA
GGCAGACACTATAAAGTTTATTCTTGTGAGGGTTGTAAGAATTTCTTTCG
AAGAAGTGTCCGAAAAGATGTGAAATATGTCTGTCCGGCGTATGGAAAAT
GTCCGGTACATAAAGATCAACGAACTAGATGCAAAGCTTGCAGActgaga
aaatgtttgaaagttGGGATGAGGAAAGAAGGCTCTTTTGGGAAAGAAAA
CTCCGCAGAGTCTTTAGGCTGTACAATGTGAACGCAAGCCATTGGTATTG
ACGCAACTCTCGGTACCGAGTATTGACGACAAAGTGAACCGAAACAAAAC
CATTGGTCTCGATTATCGAACGAGTTCCGACGAGAGCGATGACGACAAAC
GATCAGATCCGTTAACAAACAAAACATCTTCCACATCCAGTGAAAAAGAT
AACGCCCTTCTAAATGTTGTCATAGACAGGGTGGATGAAGAGGGTGGAAG
GGCGCTTTTGAATTTAGCTCAAAGTTGCCAACGGAAACCGATTTCGATAG
ATAGTGATGAGAACTTGATGCAGTATTCAGAAATAGGAACCATCAAATCG
GAATGTTCAGACGAAACACCCCCGTCATCTCACACCTCTTACCCGGCCTA
TACGGAAAAACCACCAGAAGTGCTCAGTTTAGCACATGGACGATTCCACC
CATATAACCGTGCAACGTCCTTACCTTTTCGTAACAGTTTCACACCTCAA
CATAATGGGTGGACCCTGGATATGTCGACTATgtccaaaaacaaaaactt
tgtcctTGAAGCTCCTTCAATTTCCACAACTGATGTCGGCTATTTATACG
AAATTTCAACTCGTTTATTATTCGCTACTCTAGACTGGGTACAAACGTTA
GAACCTTTTCAAAAACTCTGCAAAGTAGACCAATTTACATTACTGTTAAA
TAAATGGCATTCTTTATTCATCCTTGGTATGGCACAATCTTCACCAATGT
TTCCGATATCAACAATGTTGTTTTTGGCGAACACTGGTCATGAACCACAC
TCTGATCAAACCAACACACATCTACCATGGAGCACGTTCTTGAAATTGAA
AGATGTGATAATGAATGGATTCGTGGAATGCAAAATATCGATGGAGATTT
ATAATTGCATGAAGATTATCGCTCTTTTTGATCCGGaaatCCCTGGCCTT
GGGGACCGAGAATTCACCCATCGCACATGCGCACACTCGCGACAATTATT
GGAAGATCTCTTCGAAAATAATCAGAATCCAAAAGACTCGATGGATAATG
ATAAGACGAACTTGAATCAACAACGTATGTTTAAAGTTTTAGAATGTGTG
AACACGATACGTAAAGTTGAAGTGACTGATACTTTCTTTGTACCCATATT
GAGACAGACCTCTATTGAGTACGTCATACAAAAGGTTTTGAATGCAGAGA
AAGATTGAGCGGAGAATATTAATCCACGCGTTTTGGATGGCAACTGCAAT
AGCATAtaagaaaaaaactaaactacgaATAAAATAAATCTAACTCTGAT
TCTCAGACCTCTACGGACATACTTGAGGATTAGTATAAATGGTGGGGGTG
AGGATGAGTATTGATCGAGAAGTTTTCCTGTGCTTGGCACTAAATGGGAG
AAAAGAttgagtttttcatttttagaaaaacttgatAGGTAGTTGGAAAC
CCACAGAGAGCGAATTagctgttgaaaattttttttctgttttactatgt
taaaaacgaaattttcaaaacataattttgggatattattattattgtaa
aAATTTAGTGTGTTATTTGTATATTATATGATTATATATTATCAAATCAA
ATctatcaaaacttttaaaacatataccatc Run BLAST on NCBI transcript from alignment at sc0000162:243412..258285- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013154 ID=TCONS_00013154|Name=TCONS_00013154|organism=Clytia hemisphaerica|type=transcript|length=14874bp|location=Sequence derived from alignment at sc0000162:243412..258285- (Clytia hemisphaerica)
GAACTATATAACGAGTAGAGGAACAGCTTTTAATAACACTCGAGAGTTAA
AAGTTGTCTTATATGAAAACGTTTGAAATTTTGTTTCAGAGCGAGAAAAG
TCTTATTGAGTATGGAAAACTACTTCAAGACGGCAACGTGGGTCATGAAA
CATGATTGTTGGTTTGAGTATCTGCGTCAAAGTCATCAATTACAACAACA
GCTCACTACTTACTTTCAAAGGTATGCTTGTCTTTTCTCTTTTGGAGGAT
TTGCTGACCAGAGCAGATAGAGGGGTCGGTCGGAATGCTAGAGTGGGTTT
TATTGTTTACTATTCCTACACCTACCTTCCAATCCCATAAGGAAGTTGTC
ATAACTTGTTTACAGTGGAGAAACTTTCGCCTCTTAATAATCACCCTAGT
ATATCTTTTTACTGGAACGCGAATATTCTATTGGTTGTTTTCCAAGTAAT
AAGAATGGGCGTGCAATGGGACGTATTGGTAATGATTTTTAATGAACATT
TCCATGAACCTTTCTTCACCCACCATTATTGTTACGAAGAATCTCTACTT
TTCCATGTCATCTTTTATTTACAGCAAAGTAGATGTGTCTGTAGATTTTA
TTTCTTTCACATTGTTATTTAAGGTGGTTTTATTTGAATATATTGATTTT
ATACGTTTTGCAACTTATTGAGTTACTTGTCTGTCAACGTGTTTTAAGGT
TTTGTTAAATAGCTGGCAACTGCGAACCTATAAACCCCTGTCTCTTGATC
GGGCGATGATTATTTAGTAGAGATAATAAGTAATGAAGGAAATAAATGTC
AAAGAGGATGGTAAACAAATGGCTTGTGTTTAGTGGGAGCAGCTAAATGA
TTAGAAAAAACTTTTAATGACATTCCAAGGGATTGAAACTTCTTCGTTTA
TTTTTTCAAATGTGACATGGGGTGTTTCCATAGTATCGTTATATTGAAGA
ACTTTTTAATTCGATCCACCGTATTGCAATTTTAAGCGGGTTCTCGTCTT
CTGGCGTTTGGACTGAAGAGCATATGAAATGCAAATAGATACTGCCCCAA
AAATACCTGAAACTACTTATTTAAAAAGCAATTCCGATAGATCTTGGAGG
ATTAGAAAAGGCTTCTCTCCTTGACACGACCAAAAGGGAAAAAAAGCCGA
TTCTATGCGGATCATTTCGGTGATATAAATCTTAACATGAGATACATAGG
TTCATAAGTTGCTTAATCAGCCTGTCTTTGAATTGGAAGAACTTAATTTT
TACCCAAAGTTTACATTTTGACTTTGTTTTTTAATTTTCACCGTTTGTTT
TGATTGGTGTTGTGAAAATTAAATGGCGAATTTTGTTGGATACCGAGTGC
GGTGATTAAACCCGAAAATCTTGGCCGTCTGATATCTGACGGTAAAAATA
AGTTCAGAGTACAAGCTATCATTTGCTTTGATGTTTGGAAATTTCAAATC
TGAATCAAAAGTAGGTGTTCTTTGCATGTTTTTGGTTCCAAAATGGGTTG
AATTTGGTCTAGGTTCTGCAACAGTGCTTAGTACTGTCTTTAAATGTTAG
GTAGATATGGATATTATGATGGTGGAATTCACAAACTGATAAGAGAAGGA
GGGGAGATTATTTTGCACACCTTTTGTCTCGTGCAATGCAAGCTGGGAAA
GATTTATCACAAAATCGCGTGTCATTCTTTAGGCACAAGTGTTTCAAAAA
GAAATTTCATATTTTTCAAGTCACGCCAAACGAAATATACAAATACAAAA
AAAAATTGAAAAATAATTGGATTTTCGTGTGTCGTATGGCAAACTTGTGC
TGTCAACCTCCTGAACATCTTGTTTTCAAAATATTTTCGATTTCTTTTCT
TGTTAGAAATTTATTCAAAATGTTCTCCCCACATTTTAACTCTTCATGAC
CACAGTACATTTTCACCAATGACCTTCCCTACCAGCCATCCGATACCAAG
TCCCGTTTACACAGTTTGACCACAAATTATCGATTTGGCTCGATTATTAA
ATCATCCTGGAAGATTTGTAAATTTTGAACTTTGGTGGGCCTTCTTTTTC
ACTGTTCATTTTGATATCAAATCATTCTGTGTATATATTATAGTGTGTAC
ATATTTCTTCCTTCATATTTACTTCGAATAAGCGTTTCCTTCTTTTAAAC
ACCCCTCCTAAAAGCCAAAAAAACTAGTGATCATTACATTCGTCGATTGA
ATTACATTTGAAACACCAAAAAATATCCACATCCCTATTTTTCTGGAAGA
ACGCAGTTTTGGCTGATGTAAGTTTTGACTGATTTCCGGTCAGTAGTGAA
AAGGAGTCATAGGATTCGGAAGCGGTGCGGAAGGTCCTGGGCTCATACCG
CAAAGACTCCAAAAAGGTGCATGATACATCTCTGCTTGATGCTCAGCAAT
TAAAGAGAAGAAGCGATGGTAATTAGAGTAATCCAGGGAGGAGAGGTGCC
TTCCCCTACATTCTGGTATTGAAAGAGGAGTCATTGGATCGCCTCTTACC
GGGGTCGCAGACTTACTAATTTTTGGATGGTCTTCATCATTCTCGATGAA
AGTATAACGGGTGTTAGATGGAGCTACAACAGATTTGAAGAGAATTGGTT
CAAGGCTTCTTTGGTCGTGTTGTTTTGGCGGGAAAATCAAAAACTACCTA
AAAATGGCGCGAAATCAATTTTTAAGCTTATGGGGGTATAATAAATGTGT
GAAAAGCACCCTGATCACGAAAATTTAGCAGAAAAATTTAAGCCTTGAAG
AAATTAATTGAAAAACTTTTTGACATAAACACAATGAAAAACGATTATGA
GCATGCAGCACGAAACTTTTCGTTTTTTCATGTCACTGTTTAATACGGGA
ATAAGTAAAATCGTGTATTTTGTTTCAAATTTGTTTTCCCCTAATGATAG
CGAAACAAAAAAAACGNGGTTCATTTTGATATCAAATCATTCTGTGTATA
TATTATAGTGTGTACATATTTCTTCCTTCATATTTACTTCGAATAAGCGT
TTCCTTATTTTAAACGCCCCTCCTAAAAGCCAAAAAACTAGTGATCATTA
CATTCGTCGATTGAATTACATTTGAAACACCAAAAAATATCCACATCCCT
ATTTTTCTGGAAGAACGCAGTTTTGGCTGATGTAAGTTTTGACTGATTTC
CGGTCAGTAGTGAAAAGGAGTCATAGGATTCGGAAGCGGTGCGGAAGGTC
CTGGGCTCATACCGCAAAGACTCCAAAAAGGTGCATGATACATCTCTGCT
TGATGCTCAGCAATTAAAGAGAAGAAGCGATGGTAATTAGAGTAATCCAG
GGAGGAGAGGTGCCTTCCCCTACCTTCTGGTATTGAAAGAGGAGTCATTG
GATCGCCTCTTACCGCGGTCGCAGACTTACTAATTTTTGGATGGTCTTCA
TCATTTTCGATGAAAGTATAACGGGTGTTAGATGGAGCTACAACAGATTT
GAAGAGAATTGGTTCAAGGCTTCTTTGGTCGTGTTGTTTTGGCGAGAAAA
TCAAAAAACTACCTAAAAATGGCGCGAAATCAATTTTTAAGCTTATGGGG
GTATAATAATGTGTGAAAAACAACCTGATCACGAAAATTTAGCAGAAAAA
TTTAAGCCTTGAAGAAATAAATTGAAAAACTTTTTGACATAAACACAATG
AAAAACGATTATGAGCATGCAGCACGAAACTTTTCGTTTTTTCATGTCAC
TGTTTAATACGGGAATAAGTAAAATCGTGTATTTTGTTTCAAATTTGTTT
TCCCCTAATGATAGCGAAACAAAAAAAACGAACGAAAAGCATCAAGTCTT
TAATCTCACACACTGTTCAGCTATTGTTTCTTTTGTGTTGTTGACCCACC
TGAGGGAATCACCTTCTGCGCGCGTTCACTGCAAGCGATCGATTTCGTGC
GCACGTCAAAGCTAGCGTGACCATTCAACGCCTGTTTGCTTTGTTTCCAT
CTTTCAAAATCTGCTTTTTATATTATAAACGAATCTTTGATTATTTTTAT
GTCACGAATTTCATGTGTTCAACATTTTTCCCAATTTTACTTTCTATTTC
TCTCACTCTTTTATTCTTTCCATTTTCACAACTCAGGCAAACTGTTGTGT
TCAACCGTTCAGAATTATATCTTTCTTTTGAACTTTATAACAAAGTTACT
TTTTATCAATTTTTCATATCACGCCATCTATACATTTCTTATCATTGTTG
ATTTACTAACTTATCTTTTGATAATTACTCGTTTGACCATGGTGGTTCGG
GTGGTTCACCTGTGGCCACTTCTACTAAATTCTTTTTCAAAAAAGCTTTT
TTATGAAACTGTCTTTGCCGCCAGCCGGCGGCGTTGTTGAAAAATAAAAA
CCTTGATCTCTTTCTTCTATTAGTATCCCGTTAGTATCAGACCCACCAAA
ATGTAAAAAGGAGTAAAATTACAATCTGTCTTAACTTAAAATAATTCCTC
AATGCAATGAATTGATTTTCGGAACGCAAAGTAAATTTAGCAAGATTACT
GTAAATTAAAATAAAGAATTAGTCAATTTTATAACTTCAAAGTTTCCCCC
ATTTTTTCTTTTGTCGCACTCATCAATAGTTCGTGACACGATCGCATCCG
TTGAATGACTATGCGTGTCAAACGCGATAGGATTTGAGAGTTGACCTTCC
GGTGCGAGAGAGAGCATTCAAACCCTTCTCGTGAGGCGAGTAGCAGATTG
ATTAAGTGCATACTTTCCATTCCCCTGACAACATGTAACCCCTCTGTTTG
GCTTTCAAAAGTCTCTAACTACGTGTATGTCCACTTTGTAAACCCACATC
TCTAACTTCGTGTATGTCCACTTTGTAAACCCATAAAGTTGCTTTAGCTT
TTTAATTGGATTTGTTCAAACGAGTCTTTGAGGAAAATGCGCGGGGGTGG
GGGTTGGGGGTACTTGCGCTGATGGACAGGGTACCTTTTTCACCTGCATG
TTTCCTAGGTAGGAAAACGCCAAGATATAAAATTAGTCCCTCTTAGGGTA
CCTTTTAGGAGAATTTGGGGAAGCAATGGAAGATTTTAGGTAAAGTGGAA
AAGTTGGAGAAAATTTTGGAATTTCAGTTCCATTCAGGGTCACTTTTTTC
GCAAATGTTGTCAAAATTTCCAAAAAACAAGTCTCACGTAGGGTCCATTT
TTCGAACCTCAGTGGGACACGCCCGTCGGTCAGGAAGGATAGTACCCTTG
CTTCTTTTTTGTTCTCCTTCCAGTTATTTAAGCAAGAACACATTCCGTAA
TCTTTAGAAAGACTGTCAAGACTATTACCCAGGCTAACATTACGTACCTG
TTAAGAAATATACCCTAAAATCCAAACCTTTCAAAATCGTAATCGTCGTA
AATTTCAAAATGTTCTCCGGCCGACCGATTTTTTCGAACTTTTATTTTTA
AGGATTTTTCCACTAAGGTAGGTAGAGGGTGTTGTAACAATGGGGTATAA
GGCCGATAAAAGGAGGGCGTTAACTAATTTCAAGAATCATAAAAATAGCT
TCGCGCAATTGTTTGCGATGTTTCTGAAAATGAAAATCAACCTTTCTTCA
TTGTTTATAGGAAGGCGCCGGTTTTTATTATACCGATCTTGAGCAAGAAA
CAGAGTTTGCTACTATGATCGCGTTTATACTGATGATCTGAAAAGATTAT
CAAACAATAATTGCGAAGCGTTCTTCAAATTTCCCGTCGAAAATATTTCA
TTTAATTATGGAAATTACTCAAAATGAGGCTTTATAAAGAGGTCATTATT
TCCTCAAATAAGCGTCAAATTATCTGAAGACTTCTTTGAAATAGTGTCGA
CGCATGCGTGATAACTGTTTGAACGGTAAAATACTGGTGAAAACGTTGCA
TACAATTTCTTCCCTTTAGTCCCCAAGATGAGCTTTTCTTCGAACATTGC
TTCTTATTACTATTTCGTGTTTTGTTTTCTTTCTTTTGACCCATGTCTTA
CCGCGCGGTGAAAATTTTGAATCATTTTTGTTCGATCTTTTGGAAAATCA
ATTTATAGAGGAGTGAATCAAATTTTTAAAAATATTGGAATTTTTTTGAT
TTTTTTAAACTTGGTATATTCTTTGAAAATTCTTTTGGACGATGATAAGT
ATGGTCAATGTGAAAAATTCGAGGTAAAAATTCCGTCCACTCTTTTTTAT
AAGAACCATTTTAGTTGACGTTCCGCTGTTCTTAATTTCAGCCTCTTGTT
GTTCTTATCTTGATCTTATTTTTTAGCTTTGTTGTTCTTGCAAAATTGAA
GCTAGAATGAGATGCAGGGATGTAAATGTAGTCGTATTTTTCTGTTTATA
AATTCAAATCAGAACTGTTGTACGGTATGCAGCCGTGACTTGAATTGTTC
ATTCTCAGGGATACCTTTTGGGTCCTCTAGAGTTCTAGAATGGTGTTTAA
CTCTATGTGAGTCTGAATACTCACTCTGATATTCTATACAAAAAATACCC
ATCATCAGTTTTATACATAAAGGGTTGGACTCTCTTTACTCCTTCCCTCT
ATGCAATCAGCAAAAGAATTTAGATGATATGCAACTGTAACGTAATACCA
ATTTTAATTTTTTTCTAAAACTTATAACAAAAGTTCAAACTCTGTATTAT
AAAAGCATATCAAGTGAACTTTATTATATGATATATATTTTTCTTTCTCT
TACGATTGTTTTTTATCATTCCTACTCATGTTGTAAAGCTTTGAGTAGAG
GGAAAGCTTGCGTGACTTAAGGGGTGGCTTGTCACGCCATACTTTTTAAC
CGTTGTCTATCCAAGTTGGGTCAGATCATTCTAAGCGTTATGTATCTTAA
TGACGTCGATTTTTGCGCAAAAATTTGACCCCATAACCAATATTATTATT
CGGGACGTCCCTTATGTTTAAAAGGTCAAATGAAAGAGATTGAACCCCCG
TCTTTGGTTATGAAACAGTATCCTTCAACAATAGCTTGAAACTGCGTTGG
TAGTTTTTCTCATAATTTGACTTTCTGATAAAATATCGAAAACGAGGTCA
CTCAAACATGGGGATTTGATACATGACATTGTGAAAGACAGAAATGAGGA
CTTGCTACTGGCTAACTCGTTTTAAAGGCGCTCTTTGATTGGTTCGTTCC
ATCTACAGTTACGAAATGTAATGAATATGTCGTAAGACAAAAGTTGTAGT
CGGAGGTTATGAATCAAAAATATTGAGATGAAAAGTGAAAAGACAGACGT
TACACATGTAATATTAAAAAGTTCGTTGACTTCATCAATTTATAAACAAC
TTACAAGATAAAAAAGGCTTTTCTCTTCGAAACCAAGAAGGTTGGGAATG
AAGACAGTTTGGAGGGTTTTAATGGCAAGTTGACCTAGCCCAAAGAATAA
AGTTTTAATGAAATTGTATTTTTTTCTTCAGGCATTCAGCTGCAATTACA
AGCTACGATTATTTCCCAACGGCATCCAGTCACGTCAGTGTTGGAAGTCA
CCCTGGTGATTACAAGAAGCAGCCTAGCAGTTCAATGGAAGACTCCCCTG
TAGTGTGTCTACCTCCAACTCTCATTGTCAACGAACGAGTGAGTAACAGT
GACAAGTCTTCAGAGCTATCAGAAGAAAGATTATGCGCCATCTGCAGTGA
TCGGTCTACAGGCAGACACTATAAAGTTTATTCTTGTGAGGGTTGTAAGA
ATTTCTTTCGAAGAAGTGTCCGAAAAGATGTGAAATATGTCTGTCCGGCG
TATGGAAAATGTCCGGTACATAAAGATCAACGAACTAGATGCAAAGCTTG
CAGACTGAGAAAATGTTTGAAAGTTGGGATGAGGAAAGAAGGTTTGTCTT
CAGTTTTCATTCTTTATTTTGTAGAGAAAACTTTCTTTCAGTAGAATTCC
AGGATGAATATTCTCTTAATTTTCGACCCATTGCATTTTCATATTTCGCT
TGCATTCAGAAATCATATTATTTTAGGGTCAAAGATAAGAAACAAAATTT
GCTTATCAAGAAACAAAACCCAAACACCTGCAATACACACATCATACATT
CTCACTTTTTCTAGGCTCTTTTGGGAAAGAAAACTCCGCAGAGTCTTTAG
GGTACGTAGAAATTTCAAAATATTTAACAGTAAATTGTTGGCTAAAATTT
GAGTTTTATTTAATTGGGCTTAGTTGGCAGGATCAGGATGATGAATTTTA
AGCTCGATTAGTTAAGGACTCAATACTGTAGGAATAAGGTTGCACAAAAC
TTGACCCAGTTTGAAAAAAATATCAGGAAACTTTACCAAATATCAAATTA
ATTATAAATATTAACATGCTGTCACGTGAATTTTCTTAACAGAGAGCGAA
GATAAAAGACTCAGCATTGATAATCAATGTTTTTAAAAATAGACGTTCTT
AAAGCTTCTCGAGGTTGTGTTATGTTTTAAATTTCTGCATGACATCGAGC
CAAGGTCAGAAATTCATTAATTGTCCTGTCTCAATACAAATCAAATGTCA
AAAAAAACTCCAAAGATGGTATCATAATCTAAAGAATTATATGCAAACCC
GATTAGAATTTCTCGAAAGTATTTTTCTCCTCTATTTTTTAATGATTGCG
TTAGTGGTTTTACAGGGACAAATAAAAGTTATACTGTATACTAGTGTCTC
ACATAACTGACTATCAAAATATCTGATAACAATTTCTTTTGTTTAACCTT
TCCCTATTGTCCTTTTCATCCAATCAAGATAAGTTTCTCATGAAAATCCA
ATCAGTTCAATGACATCATTTCTCTTCGAATTCAAGTTTTGGAAAGTCTC
TCGGAACTCCTCTTTTTTCCTGGAAGATTGAGATATCTTTTTTTCATAAG
AAGCCGTAAAATTTGGCTGAGATTTGGCTAATCCTATTATGATTGGGGTT
TTTGGGAACGAGTGTTACTAACATTATATGTTCTCACTTTACTCACTTAT
TTAGTCAAATGAGTTTAATATCTTGTAGAGAATCTTCTTTCTCTAGAGTT
TTAAATACATAGTAGAGCTGTCAAATGGGCTTTTTCTTGGTCGCATCTGA
AATCTGACGTGAAAAACGGTCTTATCTGTCCTTAGTTTTTTTTCCTTATA
AAATTGTTCTTAAAAACGTGTCTTTCAAAATTTTCTTTCCTTGTTTATTA
GCTGTACAATGTGAACGCAAGCCATTGGTATTGACGCAACTCTCGGTACC
GAGTATTGACGACAAAGTGAACCGAAACAAAACCATTGGTCTCGATTATC
GAACGAGTTCCGACGAGAGCGATGACGACAAACGATCAGATCCGTTAACA
AACAAAACATCTTCCACATCCAGTGAAAAAGATAACGCCCTTCTAAATGT
TGTCATAGACAGGGTGGATGAAGAGGGTGGAAGGGCGCTTTTGAATTTAG
CTCAAAGTTGCCAACGGAAACCGATTTCGATAGATAGTGATGAGAACTTG
ATGCAGTATTCAGAAATAGGAACCATCAAATCGGAATGTTCAGACGAAAC
ACCCCCGTCATCTCACACCTCTTACCCGGCCTATACGGAAAAACCACCAG
AAGTGCTCAGTTTAGCACATGGACGATTCCACCCATATAACCGTGCAACG
TCCTTACCTTTTCGTAACAGTTTCACACCTCAACATAATGGGTGGACCCT
GGATATGTCGACTATGTCCAAAAACAAAAACTTTGTCCTTGAAGCTCCTT
CAATTTCCACAACTGATGTCGGCTATTTATACGAAATTTCAACTCGTTTA
TTATTCGCTACTCTAGACTGGGTACAAACGTTAGAACCTTTTCAAAAACT
CTGCAAAGTAGACCAATTTACATTACTGTTAAATAAATGGCATTCTTTAT
TCATCCTTGGTATGGCACAATCTTCACCAATGTTTCCGATATCAACAATG
TTGTTTTTGGCGAACACTGGTCATGAACCACACTCTGATCAAACCAACAC
ACATCTACCATGGAGCACGTTCTTGAAATTGAAAGATGTGATAATGAATG
GATTCGTGGAATGCAAAATATCGATGGAGATTTATAATTGCATGAAGATT
ATCGCTCTTTTTGATCCGGGTAAGATTTCATTCTTTGATGATTGTTGCAC
CCATTTCTACACCCCTTTCTCACAGACCCAGTAGAATTCTCAACTTCAGT
TGAGCTAGAATCTGACAATGTATATATGTCTGTCCGAAAACTTTGGGACA
GGCTTGAGACTTCAAAGATGGTCGAATTTGGCTGAAATCTAGCACACTTG
TTGCTTGACTGAATATCTGGGGTGTCTTTTTTATTTTTTGAAAGTTTTCA
TTTATAAGGGCTTGGTCATGAGTTTTAGCTCCAAAACGAGGCTGAAACTT
TGGGGGTAGGCTTGAGACTTGACTAGGTTTTGGCTGAAATTTGGCCCACT
TGTTCATTTGGTGAAAATGTGATTTTTCATTTTTTGAAAATCTTTGGAAA
AAATGGAGTATAATTTTCCACTGGGGAAGATATTTTGGCCAATTCTTCGA
GTAGGAGGGGGTCCCACCGGGTCTGTGAGAAGGGTTATATTTCTGAAGTC
TCAGAAAGCTAGTTGAGTTCACAATGATCACTATAAACTAACAGAGAGTC
CCACCAAAGCTATTTTATTATTCCACTGGAGAGAGCGTTATTCAGAAACT
ACAAGAAAACTACTTTGAATTTTGAATTTCTATCAAAAAATTTATTACGT
TGAATGACCACATAAGGGAACCAGTTTTTTACGGTCTAGTCCATTTTCCT
GGCTCCCAGAGAAAATTGAAATGCTTTTTTTACCTCTATTAATTTAGAAG
GTATTTACTGTAATTTAAATTTAAGAAAGACTGGAAAATAGATGTCTGCA
TCGTAACCACCTTTTGTTTTGGAAAGTCAGGGAATCCCTTTTCGTTCTTA
ATTTTCCATCATGACATATTCACGACAGACTTAATTAATTCACCGTTTAC
ATTGTGAAAAGAAAACGTCATTTTAAGCTGTAAGCTCATCAGTGCACGCA
AGTCACAAACAATACAACAGAAACAGTAGGAAACGAGCTCACGAGACACT
TCATGTGCTTATATATACCGAGTTCAACGGATTTAATGATGAAAAGAATA
TAAGAATAAAATGAAGTAACGAAATTCGTGAGTTCAACATGGGCTTGAAA
TTTCACGAAATCGACCTAAGTCTTTTTCTTGACTTCCTTTTGAACAGTGA
GAAATCCCCATTCATTTCCACTAGGTGTGCGGGCTTCACTTTCAAGCATT
TTATTCTCCATGCTCACTCACTCGAAACACAGTCTTATGTACTGGAGATT
TTTAAAACTTAAACTGTGAACACTGATAGCCCTGATAGCCTTCTCACCCA
AAAAGGCCAGATCTCTTAAAGAGCGAGATTGAAGTTTTACTTGCTATTCT
ACTCGAAGTCATATCCAAAAAAAGGGGAAAAGTAAAATTTCTCAAAAAAG
AAAAAGAAACTGCGAATCTCTAATAACTGATAAACTTTCAATCTTTTCAG
GGATAATTTTACTTCAATGATTATATACACGAGTCTGAAACTTTGCGTGA
CTCCCACTCCATAATATATCTCCCTTTATTTATTTTCAGAAATCCCTGGC
CTTGGGGACCGAGAATTCACCCGCCGCACATGCGCACACTCACGACAATT
ATTGGAAGATCTTTTCGAAAATAATCAGAATCCAAAAGACTCGATGGATA
ATGATAAGATGAACTTGAATCAACAACGTATGTTTAAAGTTTTAGAATGT
GTGAACACGATACGTAAAGTTGAAGTGACTGATACTTTCTTTGTACCCAT
ATTGAGACAGACCTCTATTGAGTACATCATACAAAAGGTTTTGAATGCAG
AGAAAGATTGAGCGGAGAATATTAATCCACGTTTTGGCTGGCAACTGCAA
TAGCAAATATATAATAGTAAAATAGCAAAAAACAAAAAAATAAACTATGA
ATAAAATAAAACCAACTTTGATTCTCAGACCTCTACAGATATACTTGAGG
ATTAGTATTGATCCAGAAGTTTTCCTGTGTTTGGCACTAAATGGGACAAA
AGATTGAGTTTTTCATTTTTAGAAAAACTTGATGGGTTGGAAACCCATAG
AGAGCGAATTAGCTGTAAAACCAATTTTTTTTCTGTTTTACTATGTTAAA
AACGAAATTTTCAAAACATAATTTTGGGATATTATTATTATTGTAAAAAT
TTAGTGTGTTATTTGTATATTATATGATTATATATTATCAAATCAAATCT
ATCAAAACTTTTAAAACATATACCACCAAAAGTTTCGAATATTTTTTTTC
TAGTGGAATGAGTCATACATTTACGGCGATTTTTGGGATTTCTGATATTT
TCTTGGGGGTTTGTAGTTTGTATATTTGTACTTTTAAGGGGTTTTGCAAT
TTACGGCTGAAGGTGATTGTACAAAAAAATTTAAGATATTAAGTTGAAAT
GTGTACAAGATACTTGGCAAATCAGCTAAAATGAAAAATATTTGCAGTTA
TTTAGCGAGGTTTTTACACCCCTTTTTCTGAGTTTTCAGGGTTATTTTCA
AACTTTTTTTTTCCCGTTGATGGTTTGTCAATTTTTTTTTTCTTTTTCGA
GTTTTGTTTAAACTTCATGATGAGGTCATCGCGTAAGTACTGATTTTGTT
AAGGGGTTTTTGTCGTGAGCCTTTAGCACGCTATATAGAGAGCATCGTCT
TGCATTTCAACGTGAATCGGTAAGCGAAGAAAATTTTCAGATTTTCGATT
GGAGTAATATTTTGTAGATGAAAGGAAATATAAATCAAGTTGAAACATAG
CGTTGAAACAGTGATGATCCTTTAATGAAATTGGGGAGTTGGTCTGAAGT
TTTGGTGATGTTTCTTTTTTCTTTATGAAGAACAAAACGAAAAATCTGAT
TTTTTAGTTTGAATACTTGAATACTTTTTATTGGAAGAGTTCCATTTTAA
CTAATTTACTATTTTACACCATTTCCAATAAAACGATTCCAAAAATGATT
TTTTTAGTTGTTAATTTTTCACAACATAACGAGATCTTGCATAACAAGCA
GAGCAGGCCAAATTTTTTGTGGATAGTTGATGGATATTCGAGTANGGGCG
GGGACAAAAATCAGAGTATAATTTTCTACTGGGTAAGATATTTGAGCTAA
TTTTTCCAGTGGAAGGGGGTCCCACTGGGTGTGTGATAAGGGGTGTATTT
CTCATGTCTCGGAAAGCCAGTGGGATTACTATAATTAAACCAACAGAAAA
TCAAAATATTTTCTAATGCATAGAGTATGATTCAGCAACCTAAAAAATAC
TTGGATTTTGAATTTCTATCAAGGAAGATTAATACCAATTTTTATGGTCT
AGTCGATTTTAATGGCTCCCAGAGAGAACGATAATGATTTTTTACCTCTA
TTACTCGAACTAGTAATTCGAGTTACTTAGGGGGCATTTTCTACAGTTTG
AATTTCAAAAAGACATGGAAAATAGATGTTCGTATCGTAACCGCCTTTCG
TTTTGGAAAGTCAGGGAATCCCTTTTTCGTTTCTTATTTTTCCATCATGA
CATATTCACGACAGACTTAATTAATTGACCGTTTACATTGTGAAAAGAAA
ACGTCATTTTAAGCTGTAAGCTCATAAGTGCACGCAAGTCACAAACAATA
CAACAGAAACAGTAGGAAACGAGCTCACGAAACACTTCATGTGCTTATAT
ATACCGAGTTCAACGGATTTAATGATGAAAAGAATACAAGAATAAAATGA
AGTAACGAAATTCGTGAGTTCAACATGGGCTTGAAATTTCACGAAATCGA
CCTAAGTCTTTTTCTTGACTTCCTTTTGAACAGTGAGAAATCCCCATTCA
TTTCCACTAGGTGTGCGGGCTTCACTTTCAAGCATTTTATTCTCCATGCT
CACTCNATCTTTTTCTTGACTTCCTTTTGATCAGTGAGAAATCCCCATTC
ATTTCCACTAGGTGTGCGGGCTTCACTTTCAAGCATTTTATTCTCCATGC
TCATTCTCTCGATCTCTTAAAGAGCGAGATTGAAGTTTTACTTGCTAATC
TACTCATATCCAAGAGGGGAAAAGTAAAATTTCTCAAAAAAAAAAGAAAC
CGCGAATCTCTAATAACTGATAAACTTTCAATCTTTTCAGGGATAATTTT
ACTTCAATAATTATATACACCAGTCTGAAAGTTTGCTTGACTCCCACTCC
ATAATATATCTCCCTTTATTTATTTTCAGAAATCCCTGGCCTTGGGGACC
GAGAATTCACCCATCGCACATGCGCACACTCGCGACAATTATTGGAAGAT
CTCTTCGAAAATAATCAGAATCCAAAAGACTCGATGGATAATGATAAGAC
GAACTTGAATCAACAACGTATGTTTAAAGTTTTAGAATGTGTGAACACGA
TACGTAAAGTTGAAGTGACTGATACTTTCTTTGTACCCATATTGAGACAG
ACCTCTATTGAGTACGTCATACAAAAGGTTTTGAATGCAGAGAAAGATTG
AGCGGAGAATATTAATCCACGCGTTTTGGATGGCAACTGCAATAGCATAT
AAGAAAAAAACTAAACTACGAATAAAATAAATCTAACTCTGATTCTCAGA
CCTCTACGGACATACTTGAGGATTAGTATAAATGGTGGGGGTGAGGATGA
GTATTGATCGAGAAGTTTTCCTGTGCTTGGCACTAAATGGGAGAAAAGAT
TGAGTTTTTCATTTTTAGAAAAACTTGATAGGTAGTTGGAAACCCACAGA
GAGCGAATTAGCTGTTGAAAATTTTTTTTCTGTTTTACTATGTTAAAAAC
GAAATTTTCAAAACATAATTTTGGGATATTATTATTATTGTAAAAATTTA
GTGTGTTATTTGTATATTATATGATTATATATTATCAAATCAAATCTATC
AAAACTTTTAAAACATATACCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013154-exon-sc0000162-1575043694:258065..258285 | TCONS_00013154-exon-sc0000162-1575043694:258065..258285 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1575043694:250495..250904 | TCONS_00013154-exon-sc0000162-1575043694:250495..250904 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1575043694:250235..250271 | TCONS_00013154-exon-sc0000162-1575043694:250235..250271 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1575043694:248267..249184 | TCONS_00013154-exon-sc0000162-1575043694:248267..249184 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1575043694:243412..244106 | TCONS_00013154-exon-sc0000162-1575043694:243412..244106 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1510915933:258065..258285 | TCONS_00013154-exon-sc0000162-1510915933:258065..258285 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1510915933:250495..250904 | TCONS_00013154-exon-sc0000162-1510915933:250495..250904 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1510915933:250235..250271 | TCONS_00013154-exon-sc0000162-1510915933:250235..250271 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1510915933:248267..249184 | TCONS_00013154-exon-sc0000162-1510915933:248267..249184 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1510915933:243412..244106 | TCONS_00013154-exon-sc0000162-1510915933:243412..244106 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1491911889:258065..258285 | TCONS_00013154-exon-sc0000162-1491911889:258065..258285 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1491911889:250495..250904 | TCONS_00013154-exon-sc0000162-1491911889:250495..250904 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1491911889:250235..250271 | TCONS_00013154-exon-sc0000162-1491911889:250235..250271 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1491911889:248267..249184 | TCONS_00013154-exon-sc0000162-1491911889:248267..249184 | Clytia hemisphaerica | exon |
| TCONS_00013154-exon-sc0000162-1491911889:243412..244106 | TCONS_00013154-exon-sc0000162-1491911889:243412..244106 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000162 | supercontig | sc0000162:243412..258285 - |
Blast
BLAST of TCONS_00013154 vs. Swiss-Prot (Human)
Match: RXRB (Retinoic acid receptor RXR-beta OS=Homo sapiens GN=RXRB PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 4.753e-22 Identity = 47/93 (50.54%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 352 PPTLIVNERVSNSDKSSELSEERLCAICSDRSTGRHYKVYSCEGCKNFFRRSVRKDVKYVCPAYGKCPVHKDQRTRCKACRLRKCLKVGMRKE 630
PP L V + +RLCAIC DRS+G+HY VYSCEGCK FF+R++RKD+ Y C C V K QR RC+ CR +KCL GM++E
Sbjct: 181 PPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKRE 273
The following BLAST results are available for this feature:
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