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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013075 ID=TCONS_00013075|Name=TCONS_00013075|organism=Clytia hemisphaerica|type=transcript|length=1406bp TGTAAACTCAGTGCAGTGGACGTGTTGGAAATGAGAGACCCATTAGAAAG CTAAGGAAATGGTCGACtcatgtttttcatatttttcattgtaGGTCAAC TGACGGTTCTGGCATGTTCAATTGGAGGTTTAAATACAATTTCAAATATC ACCAAGCTAAAAGACAAATCGTCCGCAAAGAAACGAACGTAGCATTTGAA AAGACAGCTCTATATTATCGACCGGAGCTCGTGATTGAATGTTTAGAGAA CGACCTTTTCTCACACGATGTTCTAGGTGAGCGTCGAATCAACTTGCTGA AAGTCCCACCATATTTCGGCAAACCCTGGGGATGGTCAATGGGTAAATAT AAAGAACTAGCGAAGAACGAGAATAGGACACCATCTTTGTTCAACTGCTC CACCATTCGTGGATGGTGGCCCTTGGAAACGGATGACCCTGAACGAGAAG ACGGTGATGGTGGTCGAGTTGAATTGGAATTGGAGTTGTTAACGAAAGAA GAAGCGGACGAGAACCCTGTCGGTGAACAACGAAATGAACCTCATGCTCT CTCAAAACCTAAACGCCCTCAAGAGAGTATGCGGTTATTGATCGGCCCTC TTCGAACACTCAGAATTTTCGTCAATTCACATCGTGGTCTTATTTGTAAA GTAGTCTTCTTGTTGCTGCTGGTTATTCTGATGCTCCTCTTTCTATACGC CATGCCTGGAGCTGCTGTCCAAAAGATGTTTGGTGCTCGTTGAGATAAAT GTCGGGTTTTATTGCAAGTATTTATCTCGATTAGTGCATGAATTTAATCA AGGCTTTGTTATGGTAATTTGTTGACCAAGCATCAAAGAGCAAAAAGAAA ATGTACTAACGAGACATCAGACTGTGTCAATATAGTTCCCTGTAACTTAT CAATCATGCCTCCTCCCCCTGTACTGATCCTTACAAAGACTACCTCAGCT GAGCTCAGTTGATCTATGTCATTTTGACGCTCTTTGTCAATTATGGGGTG TAATCTAACAAAACGGcgcaaattttaaaagaatttaaaaccaATTAGAT TTTTGATGAACGAACGAatgtatatttttgaattttttcctttaaacCTA CATACTAAAATACTATTTATAAATTATTTACAAATGAAATgtcatatata tatattttgaatGCATTGTTTATTGTATATTTTATATGATTTTTACGGGG AAATCACGAGTCATTAAACCAACCAGGATTCGCTTccagtaaaaaaataa tttatataggggtcattttgaaatagaaagttttttaaaaatatttttgt actaTATCTTGAGGGTTGATTTGGTGTTGGACGTGTGTATATGTATTTGG ATGACCATATATTGACcctaaaaaatgaaacaaaataattgaatatGAAT TATTAA Run BLAST on NCBI protein sequence of TCONS_00013075-protein >TCONS_00013075-protein ID=TCONS_00013075-protein|Name=TCONS_00013075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
MFNWRFKYNFKYHQAKRQIVRKETNVAFEKTALYYRPELVIECLENDLFS HDVLGERRINLLKVPPYFGKPWGWSMGKYKELAKNENRTPSLFNCSTIRG WWPLETDDPEREDGDGGRVELELELLTKEEADENPVGEQRNEPHALSKPK RPQESMRLLIGPLRTLRIFVNSHRGLICKVVFLLLLVILMLLFLYAMPGA AVQKMFGAR Run BLAST on NCBI transcript from alignment at sc0000162:104867..109062+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013075 ID=TCONS_00013075|Name=TCONS_00013075|organism=Clytia hemisphaerica|type=transcript|length=4196bp|location=Sequence derived from alignment at sc0000162:104867..109062+ (Clytia hemisphaerica) TGTAAACTCAGTGCAGTGGACGTGTTGGAAATGAGAGACCCATTAGAAAG
CTAAGGAAATGGTCGACtcatgtttttcatatttttcattgtaGGTCAAC
TGACGGTTCTGGCATGTTCAATTGGAGGTTTAAATACAATTTCAAATATC
ACCAAGCTAAAAGACAAATCGTCCGCAAAGAAACGGTCAGTTGAAAGTTC
CTTTGTTCGTTTTTTCATTTAGGTCTGCTCGTCTTCTTTTAATCAAAGGG
TCTGCGTTATCAATATATTGCCAATTGGTAAATACTAATGGTAGACGAAT
AGACTCTCATCTTTATCAGTTTCTCGGTGCAACCTGATATAAAAGTTCGA
ATaatgttggaaaattttcaaaattttaataaacggggggaccaaATTTC
CGGAGGGGttagaaattgtacttctgaaaacccaaaataaggtaaatata
ggctaaaatcaggttaTTTAGAGctaaataaggggccttctctttggcag
ctgaaaatattcttgaaaatttataaacaGGGGGTGTcctaattttcgaa
aaattaacaagcagggggcccgtttatttggaacctaagagaaGCTTTTa
gtactttaagggcagaaactttcgtgggcagaaactttcgcactttcgcg
tttttcgcgattttgatcctttttcgagaaagtttctgccaggtaagaaa
ttaaacctgaaaaacgcgaaagtttttttcgcgaaaaataaactttccta
ctcagttttgcactgtttgctaaatttttgcgtgtttttgttaccaaaaa
aggtaaattttatatgaattcgcgaaagttctatctgtaaaatttcggct
aaaaccataattcgcgaaacttaaattcgctaaatttcgcgactttttga
cttcgcgaaactttctgcccgtgaaactttctgcccttaaagtatcaGTA
CTTATTTCAATGTTTATTCTTTTGCAGAACGTAGCATTTGAAAAGACAGC
TCTATATTATCGACCGGAGCTCGTGATTGAATGTTTAGAGAACGACCTTT
TCTCACACGATGTTCTAGGTATGTATTGTACGGGATTCgaagatttgaaa
actttttaaaaaaaagaaaagtttaaatTACATAGACATAGTTGTGAAGC
TACGAAGAGTTATTATTGTTAATACTTTCTACTCACAATACTTTACCGGT
AGATAATTCGTTGGTGAAAAATATTCGCCGGTTAAAAATATTCGTCTGtc
aaaaattccgtcaccgagcgatttttttgtcattttctacCGAAGAATTT
CTTACCGAAAAAGgtatatttttaataaaatttctaaccGTAGGTGAGCG
TCGAATCAACTTGCTGAAAGTCCCACCATATTTCGGCAAACCCTGGGGAT
GGTCAATGGGTAAATATAAAGAACTAGCGAAGAACGAGAATAGGACACCA
TCTTTGTTCAACTGCTCCACCATTCGTGGATGGTGGCCCTTGGAAACGGA
TGACCCTGAACGAGAAGACGGTGATGGTGTAAGTGCCCAGCTGGtgcaca
atgttgtttcaacgttcatcgaATATTCACAACGTCAATATAACGTtgga
tgaacattgaaacaacgtcttgtgccagctgggtgggATTTTGAACGTGT
CTCTTACAAGATATTTTACACGAATGGCTAAAAGAAATCCAGTCATAAGA
TATATGTGGGCCCAGTCCATTCGCTTTATGCGAGCGCTATTTTATGTTAT
CACGTGTGAACCATGTAAGCATCATTTGACTAATCTCCATTGTAGTGGTT
TCCACATGGAATATCAGAAAAGTGCTCACTTAAGGCGAATGGACTTTAGG
CTTGAAAAAGGGAATATGTAAAACTTTAAAGGAGTGGGCGGTCAAGACTT
ATCAATGAGAATAAGTGAATTCAatatattgatttgattttcttttgtag
GGTCGAGTTGAATTGGAATTGGAGTTGTTAACGAAAGAAGAAGCGGACGA
GAACCCTGTCGGTGAACAACGAAATGAACCTCATGCTCTCTCAAAACCTA
AGTAAGTTCGCTAATCACTAGCTCTGCTGGTTTAACTCACCAAGTGCCTT
AACACACTGTTGATTTGGCTCTTTCTAGGAGGTGTTAGATTTGGGGAAGC
CTGAGAGTAATATTTTGCGTTGTCACATCATCTCAACACCGGACGATATG
TTACATGACATGGAATCTCGTTTATGACATTAATTGGTTTGTTGATCATC
CAAGTTGATCGTTAAAATTCTTCTAGTTGACTTTTTGACTTATTGGTTAA
CTTACCGTTGTTGGATATTGTTGATTGTAGGATTATCCCTTCATAAAGGA
AATATAAATTGTAGATCTGATGAGTACCTGTAAATAATTCCAAATCAGAA
GCTCGAAATCACAATTTTCTCCTTCCTTTTTTAGACGCCCTCAAGAGAGT
ATGCGGTTATTGATCGGCCCTCTTCGAACACTCAGAATTTTCGTCAATTC
ACATCGTGGTCTTATTTGTAAAGTAGTCTTCTTGTTGCTGCTGGTTATTC
TGATGCTCCTCTTTCTATACGCCATGCCTGTGAGTAGACTTCTGTgagga
ttttgaattttatgagGATAGACATCCTTGTCTCTTTGAGGAAGCTCAAT
TCTGAATGGGAATAGAAACCACCTGTTTTAATGGTAGGGATTTCAAATTC
TATTCTACTTGTTATTGATGTTCAAAAATCTATCCTTTGAGAGGGGTCCC
AGCCGGTCTGTGGCACGGGttgtataagaaaatttttcgccagaaattga
aattttttacgTACCGAAATTCTCTCTGTCATTTCAACATGACTATTTGC
CTAATTTAGAGTGAATTTTCTTCGCCTTTTGATTTCATCAGATATTTCAT
TGATCAATTTTATTATTGGGTATGTGATGTGTGTCAATATAAGTAAGGAA
TCTCGAGTAGCATTTTGTCCATTCCACTTGCGGATGGAGAAGGTTTcgta
atttttctttctaataTCGAGTTCGATGTCCTGTTTTATCTATTCCCCGA
ATGCGTGCATTACCTCAAATTTCTCTTCATTTTCGTAATCATAGGGAGCT
GCTGTCCAAAAGATGTTTGGTGCTCGTTGAGGTACTTGATAAGAAAATGT
CGAAATATAGAATGGATGAAACTAAAAGAACTTAATAAATGGATCATTCT
TTCTCTTGGATTTCCTCTACAAGTTACTCAGTCCaacaaaaatacaaaca
aacaaattgtTTCCCATGGAAATCGAGATACGAGAACATTTCTGAAACAT
TACTTCCTTTATCTTAACTCATCCTTTGGTTGAGTTATGTAACGCCAATT
TTCACGTATTATGAATGTCGTTTCAACATTCATTCCTGAACATTGGGTAG
ATATCTCGACTTTCAATCTTGTAGCTTGTTAAGAGCGGAAATTAAAGTAA
TTAGGGTAGGAGATTGCGTTTTAATTGGCCACCTAGAGTTGTTTTTGTAA
TTCGTAAATGCATTCTATTTATTCTTCATTATAGATAAATGTCGGGTTTT
ATTGCAAGTATTTATCTCGATTAGTGCATGAATTTAATCAAGGCTTTGTT
ATGGTAATTTGTTGACCAAGCATCAAAGAGCAAAAAGAAAATGTACTAAC
GAGACATCAGACTGTGTCAATATAGTTCCCTGTAACTTATCAATCATGCC
TCCTCCCCCTGTACTGATCCTTACAAAGACTACCTCAGCTGAGCTCAGTT
GATCTATGTCATTTTGACGCTCTTTGTCAATTATGGGGTGTAATCTAACA
AAACGGcgcaaattttaaaagaatttaaaaccaATTAGATTTTTGATGAA
CGAACGAatgtatatttttgaattttttcctttaaacCTACATACTAAAA
TACTATTTATAAATTATTTACAAATGAAATgtcatatatatatattttga
atGCATTGTTTATTGTATATTTTATATGATTTTTACGGGGAAATCACGAG
TCATTAAACCAACCAGGATTCGCTTccagtaaaaaaataatttatatagg
ggtcattttgaaatagaaagttttttaaaaatatttttgtactaTATCTT
GAGGGTTGATTTGGTGTTGGACGTGTGTATATGTATTTGGATGACCATAT
ATTGACcctaaaaaatgaaacaaaataattgaatatGAATTATTAA Coding sequence (CDS) from alignment at sc0000162:104867..109062+ >TCONS_00013075 ID=TCONS_00013075|Name=TCONS_00013075|organism=Clytia hemisphaerica|type=CDS|length=3780bp|location=Sequence derived from alignment at sc0000162:104867..109062+ (Clytia hemisphaerica) ATGTTCAATTGGAGGTTTAAATACAATTTCAAATATCACCAAGCTAAAAG ACAAATCGTCCGCAAAGAAACGAACGTAGCATTTGAAAAGACAGCTCTAT ATTATCGACCGGAGCTCGTGATTGAATGTTTAGAGAACGACCTTTTCTCA CACGATGTTCTAGGTGAGCGTCGAATCAACTTGCTGAAAGTCCCACCATA TTTCGGCAAACCCTGGGGATGGTCAATGGGTAAATATAAAGAACTAGCGA AGAACGAGAATAGGACACCATCTTTGTTCAACTGCTCCACCATTCGTGGA TGGTGGCCCTTGGAAACGGATGACCCTGAACGAGAAGACGGTGATGGTGG TCGAGTTGAATTGGAATTGGAGTTGTTAACGAAAGAAGAAGCGGACGAGA ACCCTGTCGGTGAACAACGAAATGAACCTCATGCTCTCTCAAAACCTAAA CGCCCTCAAGAGAGTATGCGGTTATTGATCGGCCCTCTTCGAACACTCAG AATTTTCGTCAATTCACATCGTGGTCTTATTTGTAAAGTAGTCTTCTTGT TGCTGCTGGTTATTCTGATGCTCCTCTTTCTATACGCCATGCCTGGAGCT GCTGTCCAAAAGATGTTTGGTGCTCGTTGAATGTTCAATTGGAGGTTTAA ATACAATTTCAAATATCACCAAGCTAAAAGACAAATCGTCCGCAAAGAAA CGAACGTAGCATTTGAAAAGACAGCTCTATATTATCGACCGGAGCTCGTG ATTGAATGTTTAGAGAACGACCTTTTCTCACACGATGTTCTAGGTGAGCG TCGAATCAACTTGCTGAAAGTCCCACCATATTTCGGCAAACCCTGGGGAT GGTCAATGGGTAAATATAAAGAACTAGCGAAGAACGAGAATAGGACACCA TCTTTGTTCAACTGCTCCACCATTCGTGGATGGTGGCCCTTGGAAACGGA TGACCCTGAACGAGAAGACGGTGATGGTGGTCGAGTTGAATTGGAATTGG AGTTGTTAACGAAAGAAGAAGCGGACGAGAACCCTGTCGGTGAACAACGA AATGAACCTCATGCTCTCTCAAAACCTAAACGCCCTCAAGAGAGTATGCG GTTATTGATCGGCCCTCTTCGAACACTCAGAATTTTCGTCAATTCACATC GTGGTCTTATTTGTAAAGTAGTCTTCTTGTTGCTGCTGGTTATTCTGATG CTCCTCTTTCTATACGCCATGCCTGGAGCTGCTGTCCAAAAGATGTTTGG TGCTCGTTGAATGTTCAATTGGAGGTTTAAATACAATTTCAAATATCACC AAGCTAAAAGACAAATCGTCCGCAAAGAAACGAACGTAGCATTTGAAAAG ACAGCTCTATATTATCGACCGGAGCTCGTGATTGAATGTTTAGAGAACGA CCTTTTCTCACACGATGTTCTAGGTGAGCGTCGAATCAACTTGCTGAAAG TCCCACCATATTTCGGCAAACCCTGGGGATGGTCAATGGGTAAATATAAA GAACTAGCGAAGAACGAGAATAGGACACCATCTTTGTTCAACTGCTCCAC CATTCGTGGATGGTGGCCCTTGGAAACGGATGACCCTGAACGAGAAGACG GTGATGGTGGTCGAGTTGAATTGGAATTGGAGTTGTTAACGAAAGAAGAA GCGGACGAGAACCCTGTCGGTGAACAACGAAATGAACCTCATGCTCTCTC AAAACCTAAACGCCCTCAAGAGAGTATGCGGTTATTGATCGGCCCTCTTC GAACACTCAGAATTTTCGTCAATTCACATCGTGGTCTTATTTGTAAAGTA GTCTTCTTGTTGCTGCTGGTTATTCTGATGCTCCTCTTTCTATACGCCAT GCCTGGAGCTGCTGTCCAAAAGATGTTTGGTGCTCGTTGAATGTTCAATT GGAGGTTTAAATACAATTTCAAATATCACCAAGCTAAAAGACAAATCGTC CGCAAAGAAACGAACGTAGCATTTGAAAAGACAGCTCTATATTATCGACC GGAGCTCGTGATTGAATGTTTAGAGAACGACCTTTTCTCACACGATGTTC TAGGTGAGCGTCGAATCAACTTGCTGAAAGTCCCACCATATTTCGGCAAA CCCTGGGGATGGTCAATGGGTAAATATAAAGAACTAGCGAAGAACGAGAA TAGGACACCATCTTTGTTCAACTGCTCCACCATTCGTGGATGGTGGCCCT TGGAAACGGATGACCCTGAACGAGAAGACGGTGATGGTGGTCGAGTTGAA TTGGAATTGGAGTTGTTAACGAAAGAAGAAGCGGACGAGAACCCTGTCGG TGAACAACGAAATGAACCTCATGCTCTCTCAAAACCTAAACGCCCTCAAG AGAGTATGCGGTTATTGATCGGCCCTCTTCGAACACTCAGAATTTTCGTC AATTCACATCGTGGTCTTATTTGTAAAGTAGTCTTCTTGTTGCTGCTGGT TATTCTGATGCTCCTCTTTCTATACGCCATGCCTGGAGCTGCTGTCCAAA AGATGTTTGGTGCTCGTTGAATGTTCAATTGGAGGTTTAAATACAATTTC AAATATCACCAAGCTAAAAGACAAATCGTCCGCAAAGAAACGAACGTAGC ATTTGAAAAGACAGCTCTATATTATCGACCGGAGCTCGTGATTGAATGTT TAGAGAACGACCTTTTCTCACACGATGTTCTAGGTGAGCGTCGAATCAAC TTGCTGAAAGTCCCACCATATTTCGGCAAACCCTGGGGATGGTCAATGGG TAAATATAAAGAACTAGCGAAGAACGAGAATAGGACACCATCTTTGTTCA ACTGCTCCACCATTCGTGGATGGTGGCCCTTGGAAACGGATGACCCTGAA CGAGAAGACGGTGATGGTGGTCGAGTTGAATTGGAATTGGAGTTGTTAAC GAAAGAAGAAGCGGACGAGAACCCTGTCGGTGAACAACGAAATGAACCTC ATGCTCTCTCAAAACCTAAACGCCCTCAAGAGAGTATGCGGTTATTGATC GGCCCTCTTCGAACACTCAGAATTTTCGTCAATTCACATCGTGGTCTTAT TTGTAAAGTAGTCTTCTTGTTGCTGCTGGTTATTCTGATGCTCCTCTTTC TATACGCCATGCCTGGAGCTGCTGTCCAAAAGATGTTTGGTGCTCGTTGA ATGTTCAATTGGAGGTTTAAATACAATTTCAAATATCACCAAGCTAAAAG ACAAATCGTCCGCAAAGAAACGAACGTAGCATTTGAAAAGACAGCTCTAT ATTATCGACCGGAGCTCGTGATTGAATGTTTAGAGAACGACCTTTTCTCA CACGATGTTCTAGGTGAGCGTCGAATCAACTTGCTGAAAGTCCCACCATA TTTCGGCAAACCCTGGGGATGGTCAATGGGTAAATATAAAGAACTAGCGA AGAACGAGAATAGGACACCATCTTTGTTCAACTGCTCCACCATTCGTGGA TGGTGGCCCTTGGAAACGGATGACCCTGAACGAGAAGACGGTGATGGTGG TCGAGTTGAATTGGAATTGGAGTTGTTAACGAAAGAAGAAGCGGACGAGA ACCCTGTCGGTGAACAACGAAATGAACCTCATGCTCTCTCAAAACCTAAA CGCCCTCAAGAGAGTATGCGGTTATTGATCGGCCCTCTTCGAACACTCAG AATTTTCGTCAATTCACATCGTGGTCTTATTTGTAAAGTAGTCTTCTTGT TGCTGCTGGTTATTCTGATGCTCCTCTTTCTATACGCCATGCCTGGAGCT GCTGTCCAAAAGATGTTTGGTGCTCGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00013075-exon-sc0000162-1491911889:104867..105051 | TCONS_00013075-exon-sc0000162-1491911889:104867..105051 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1510915933:104867..105051 | TCONS_00013075-exon-sc0000162-1510915933:104867..105051 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1575043694:104867..105051 | TCONS_00013075-exon-sc0000162-1575043694:104867..105051 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1491911889:105844..105934 | TCONS_00013075-exon-sc0000162-1491911889:105844..105934 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1510915933:105844..105934 | TCONS_00013075-exon-sc0000162-1510915933:105844..105934 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1575043694:105844..105934 | TCONS_00013075-exon-sc0000162-1575043694:105844..105934 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1491911889:106210..106394 | TCONS_00013075-exon-sc0000162-1491911889:106210..106394 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1510915933:106210..106394 | TCONS_00013075-exon-sc0000162-1510915933:106210..106394 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1575043694:106210..106394 | TCONS_00013075-exon-sc0000162-1575043694:106210..106394 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1491911889:106817..106917 | TCONS_00013075-exon-sc0000162-1491911889:106817..106917 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1510915933:106817..106917 | TCONS_00013075-exon-sc0000162-1510915933:106817..106917 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1575043694:106817..106917 | TCONS_00013075-exon-sc0000162-1575043694:106817..106917 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1491911889:107301..107445 | TCONS_00013075-exon-sc0000162-1491911889:107301..107445 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1510915933:107301..107445 | TCONS_00013075-exon-sc0000162-1510915933:107301..107445 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1575043694:107301..107445 | TCONS_00013075-exon-sc0000162-1575043694:107301..107445 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1491911889:107961..107997 | TCONS_00013075-exon-sc0000162-1491911889:107961..107997 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1510915933:107961..107997 | TCONS_00013075-exon-sc0000162-1510915933:107961..107997 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1575043694:107961..107997 | TCONS_00013075-exon-sc0000162-1575043694:107961..107997 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1491911889:108401..109062 | TCONS_00013075-exon-sc0000162-1491911889:108401..109062 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1510915933:108401..109062 | TCONS_00013075-exon-sc0000162-1510915933:108401..109062 | Clytia hemisphaerica | exon |
| TCONS_00013075-exon-sc0000162-1575043694:108401..109062 | TCONS_00013075-exon-sc0000162-1575043694:108401..109062 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000162 | supercontig | sc0000162:104867..109062 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00013075 vs. Swiss-Prot (Human)
Match: OTOF (Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 5.121e-17 Identity = 85/223 (38.12%), Postives = 127/223 (56.95%), Query Frame = 3
Query: 87 HCRSTDGSGMFNWRFKYNFKYHQAKRQIV--RKETNVAFEKTALYYRPELVIECLENDLFS-HDVLGERRINLLKVPPYFGKPWGWSMGKYKELAKNENRTP--SLFNCSTIRGWWPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPVGEQRNEPHALSKPKRPQESMRLLIGPLRTLRIFV-NSHRGLICKXXXXXXXXXXXXXXXYAMPGAAVQKMFGA 737
H S G G FNWR+ + F Y A+ +IV +KE+ ++++T L ++ + D FS D LG ++L + P +M E+A E P S+F ++GWWPL + E G+VE EL LLT EEA++NPVG RNEP L KP RP S + PL++ R F+ +++R L+ K++ LLLL++L+ LFLY++PG V+K+ GA
Sbjct: 1779 HYHSLTGEGNFNWRYLFPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTM----EMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAEKNPVGLARNEPDPLEKPNRPDTSFIWFLNPLKSARYFLWHTYRWLLLKLLLLLLLLLLLALFLYSVPGYLVKKILGA 1997
The following BLAST results are available for this feature:
|