TCONS_00012836 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012836
Unique NameTCONS_00012836
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1364

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012836 ID=TCONS_00012836|Name=TCONS_00012836|organism=Clytia hemisphaerica|type=transcript|length=1364bp
AGATCAATGTCGCTGGTCTTGTTATTGCTGGTTCTGCAGATTTCAAATCA
GAGTTGAGTCAGTCTGATATGTTTGATGGTCGGTTACAagcaaaaatatt
gaaagttgTTGATGTTTCATATGGTGGTGAAAATGGTTTCAACCAGgCAA
TCGAATTATCAGCCGAAGTTCTTTCAAACGTCAAGTTCATTCAAGAGAAG
AAATTGATAGgaaaatattttgacgAAATCTCACAAGATACAGGTCGCTT
TTGTTTCGGCGTCGACGACACATTGAAGGCTTTGGAAATGGGAGCTGTTG
AAACACTCATTGTTTGGGAAAatcttgaaacacaacgtataACCTTGAAA
AATCACAGTTCGGACGatAATAACATTTTGCTACTGAATCCTGAACAAGA
AAAAGATAGAACAAACTTCCTGGATAAGGAAACTAACGTTGAGTTGGAAA
TATTGGACAAAATGCCGCTCTTGGAATGGCTTGCTAATAATTACAAATCC
TTCGGTGCTGCATTGGAAATCGTTACAGATCGTTCACAAGAAGGCTCGCA
ATTTTGTCGTGGTTTCGGTGGTATTGGAGGTTTACTGCGGTACAAAGTGG
ACTTTCAATCGATGGACTACGATGATTTGGATGACCTTGACTATTACGAT
GATGACGATGAATCTCTCTTCTAAatagtgaacaaaaaatgaaagatttt
atcaaatcatCCCATCATCGGTATAAATACACAGAAAGTGCAATACAGTG
AAGTTTCATTACGAAACGCCATTGAACTGTTGATACCGAAGAGCAACTGA
ATGGTTCCATCCTATGGCTGGTGGCACGAAAAACAGTTCGCTTTTAATGA
TTTTGACGTTAAAGATGGGGGTGTCTCCTCTATAAGTGAAACAAACGACG
ACCTAATGACGTTTCAGCAATAACTGTAGAAGACAAGAAAGAAGCCTTTG
AATAGGCTCATCAGAAACGAGGgcgatattttatttttgaaaatcgagat
tttattttatttggtttttattgTAGTTCTccattgttgttttttcttat
ttgttcGCCATTCTCCAAAAAGACTTTTATCGTGAAAAGTCCAAGACAAG
GTTTTTACAAATTCGCCGACGTAGATTCCAATGAAAACCAGAATGTTATC
TCTCATTTAGCATGACCttaaatagtaaagtaaattttgtgttttattAC
TGGGCATTTGTATTTTTGTGTATTTATTCAGATAATTTCAGAATAACAGA
ATTGTGTCAATCGTTCATATTTGTCTGACTTCCAATTTAAGAGTTGCCTA
ACGACTACCCAACGAGGGTTGTTCCAGaagcttttttttatatatattct
AAAAAACATCGAAG
Run BLAST on NCBI

transcript from alignment at sc0000156:338684..347892-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012836 ID=TCONS_00012836|Name=TCONS_00012836|organism=Clytia hemisphaerica|type=transcript|length=9209bp|location=Sequence derived from alignment at sc0000156:338684..347892- (Clytia hemisphaerica)
AGATCAATGTCGCTGGTCTTGTTATTGCTGGTTCTGCAGATTTCAAATCA
GAGTTGAGTCAGTCTGATATGTTTGATGGTGTAAGTGAATTAACTTATAA
TATCCGGTATCGAAATTTATAGACAATACTTTCTTTTTTCAAAGCAATAA
CCTCCTCATCAATTCACGATATGCATCACTGCAATGTCTTCATCATCACA
CCTTAGACCCGACAGCTGATCGGTTGTAAGTGACGTAAAATCAGTCAATA
CTTCACTTTGCAACCAATCAGCTGCTGATGTAATGTTAGAAGACATTGCA
ATGGTGCATATCATGAATGCTGGAACCTAAAAGACTATGGCGACTATTTT
AATTATTCTCACATTTTCTTTACCAGCGGTTACAAGCAAAAATATTGAAA
GTTGTTGATGTTTCATATGGTNTATTTTCCTAGAGGAATTTTCAGAAAAA
GTCATTCTCACGGCTGGATAGCCCTGAAGTAGAAGTATCCAAAAATGGTA
TTGTTTGTCAGCTTTCGTTTCTAGATATTGAAAATTATCGATTTTTTTTG
CTGAGTCAGCAGTTTTTCAGCATATTTACCCACTTTAAAAATGAAATATC
TCAAGAAAGTTAACAAACCATACCATTTTCGGATACTACTAATTCAGGGC
TATCCAGCTGTGGAAATGATTTTTTCTGAAAATGCTCCCAGAAAAATGCT
GACGTCATCGGAAAACGCCAAAAAGGTCGATTTTTAATAAAATCTTCCTC
AAAGGTCGTGGTGGTCAATCTGCTTTACGTTTTGCACGTTTACGTATGGA
GAAACGTCACAATTACGTCAGAAAAGTGGCTGAGACGGCTGTACAGATGT
TCATTTCCAACGATAAAGTAGGTGTTGTTTGTAGCCAGTATTGTTTAAGT
CAACAATTTTCTTTTCTGTAAAAGAAAGGATGAAATTTTACAAAATACAA
GCTCTCGCTTACCAGACCCCATCGAACGTGGTCTCGTATTTTTACTATTT
TTTTCAAGTTGAAGAAGGGTATACATTATATGCAAATGATACCTGCAGTG
TGATAAGTTTTTAGTTTGCAAAGTTTATCAGCAACCTAAAGTGATATTGA
CTCCATTTTCAATCTGTTATTTGTTAGATCAATGTGGCTGGTCTTGTTAT
TGCTGGTTCTGCAGATTTCAAATCAGAGTTGAGTCAGTCTGATATGTTTG
ATGGTGTAAGTGAATTAACTTATAATATCCGGTATCGAAATTTATAGACA
ATACTTTCTTTTTTCAAAGCAATAACCTCCTCATCAATTCACGATATGCA
TCACTGCAATGTCTTCATCATCACACCTTAGACCCGACAGCTGATCGGTT
GTAAGTGACGTAAAATCAGTCAATACTTCACTTTGCAACCAATCAGCTGC
TGATGTAATGTTAGAAGACATTGCAATGGTGCATATCATGAATGCTGGAA
CCTAAAAGACTATGGCGACTATTTTAATTATTCTCACATTTTCTTTACCA
GCGGTTACAAGCAAAAATATTGAAAGTTGTTGATGTTTCATATGGTGGTG
AAAATGGTTTCAACCAGGTATCTAGCTGTTTGTTCGAAATGCGATAGAGA
GTCTTCCTTTATTTGCCAGAAGTACGACTTTCTGAATGTGTTTTTCTAAT
AGCCCTAACGATAATAAAAATGTATCCTGAGCTTCATCGAATATTTCTAT
TTACATTGTTTCTTTTGTTTCTTTTCAGGCAATCGAATTATCAGCCGAAG
TTCTTTCAAACGTCAAGTTCATTCAAGAGAAGAAATTGATAGGTATAATG
AACGCTTTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTTCTATAAATT
AACCCATGTCCGTCCGTCCGTCCGTCCGTCCGTCTGTTACCAGCTTTTCT
CAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAAT
GGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAATTTATAA
AATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGG
TTTTTTGTGCAAAGATGGAGGACAAGATTCTCTAAAGAATGGCTGAAGTG
GTTTTTCCCGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTCGTATTT
CGGGGAAATTCCCTTTAACCAAATAAGAAAATTTCTCAATGTTGACTCGT
TATTTTTTTCTGATTTTTTGCACAATGATACAAAATGGCAATGCCTAAAA
TGTGTCGGAGCCCGATTTTTGAAAAAAAATATATTTGGGCAAATTTGGAC
CAAAAACTGCCTAAAAATAGGGTTTTTTCGACTTTGTGCAAAATCTTGTC
ATTACTTTTTTCTGGTTTTTTGTGCAAAGATGGAGGACAAGATTCTCTAA
AGAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTTATTCGCCTTAAAAGA
TGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATTTC
TCAATGTTGACTCGTTATTTTTTTCTGATTTTTTGCACAATGATACAAAA
TGGCAATGCCTAAAATGTGTCGGAGCCCGATTTTTGAAAAAAAATATATT
TGGGCAAATTTGGACCAAAAACTGCCTAAAAATAGGGTTTTTTCGACTTT
GTGCAAAATCTTGTCATTACTTTTTTCTGGTTTTTTGTGCAAAGATGGAG
GACAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTT
ATTCGCCTTAAAAGATGGATTTTCGTATTTTGGGGAAATTCCCTTTAACC
AAATAAGAAAATTTCTCAATGTTGACTTGCATAATTTTTTTCTGATTTTT
TTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGAAGGAGCCAGATT
TTGAAGGAAAATTTTTTTGGGCAAATTTGGGCCAAAAACAGCTTAAAAGG
TTTTTTGGGCCTGAATGGTTTAAGTGATTTTCGTATTTGGGGANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTCAACAC
ACAAGCTTTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCACTTTT
TTCTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCGTTCAGCATGTT
GCTTGTTTTCTTAAGGATGTACCAAGATCCTTCAATGCGACTATAAGTAC
AATTTTTAAGAGCTTTGAACTGAGAAGGTTAAATGTTTTTTCTAAGAAAT
TTATCCTGGTAACAAGATACGATCCTGGACAAAACTGGTTGTCCACACCC
TTCCCAAATATCGATTTTTTGGGGAAAGAGGGGACTTCTCGTTGGAAAAG
GGTGATCGGACACCATTTTTGACAACAATGGTACTACCCTTATCAAAAGT
CTTTATTAACATAACTTCGTTTTTTTTCTCCAGGAAAATATTTTGACGAA
ATCTCACAAGATACAGGTCGCTTTTGTTTCGGCGTCGACGACACATTGAA
GGTATGTATTTTTCTTTCCTCGTACGTTGAGCTCTTTTGAAAAAACGATC
TGCCTTTTCGCTTCACCTGATGCTTTAAGGATGAGAATAGAATAATTACT
TATATTTATTGCATTTTTCGTTTAGACATTATTTTCCTATAATAAATATT
GAAGAATGATGTTTGTTTTTATCCCTTCAGGCTTTGGAAATGGGAGCTGT
TGAAACACTCATTGTTTGGGAAAATCTTGAAACACAACGTATAACCTTGA
AAAATCACAGTTCGGACGGTAAGGATTGTTTGTTTTATCACTCGTAAATA
TGCTTCGTAAATGCAATGCCCTACCTTCGCCGTAAAGATGACTGCCTGTG
TGCAAGAGGCTCAAATAAAGATTAGATACCAACTTTCGAAAAAAAAGTTT
AACCAGGACATAAAACAGATATATTTTCAAATTAGAGTTTGTTCCCAGCA
CAATCTAATATTTGCTTCTTTATTACAAGGAATCATTGTTTGAAAATGTT
GTATCACTAAAATCCAGAATTTTTACCCATAGCTACGAAAAGAAGACTTC
AATAATTATTTTAAGACAATTTCTTTTTCAAGACTTACGAACTTATGACT
GCAAAAAAAATTTTAACGCCTGAACAGACAGGATTAAGCTTCACACAAGC
CTGTAAATTCCTATACTGGGTGCACCAAAAAAAGATATACAGGTTTCTCG
AGATATAGTGAGCTTCAGGATTTATATTTTTTGTTCATTCTTTTTTTATT
GTATAGAGGATGCTCTAACTTGAATTTTGAGCTATTATACATTAAATTTG
AAAAGTAGTTCGAAAGTTATTTCCAACAAACTGACTTTTTTTCCATGTCG
AAATTTCAAAAAAATCATTAAAAACAGCAATCATGCTATAAATAAGTCAA
AATGACAAAAACACAATTTCATTGTTTTTTTTTATTCTTTTTTCTCCTAT
CTTATATTTTGCCAGCAGTTTGCCATCTTATTTGTCATGAACATTTCCAA
CACCAGCAAACTCAATGCAGAACCAAGTCCTTTAAGCAACTACCTTAAGT
GGATAAATTTTGGCGGGGATTAAATTTGGCGAATTTTGATAAAATTCGCC
AAAGTAAATCCTCGCCTAAATTTCAAAAATCGGCCATTCGCCAAATTAAA
TCCCCGCCAAATTTCACAAAATTGATCAATCGCCAAATTAAATTCACGAC
AAAATTAATCCACTTAAGGTTGACTCGACTAGGAATGGTGATCTATTTTT
CAAAACTTTTCTCACATAGCATACACACATAACATCAAAACCTCTCTTGG
AGATTTACAAAAAAAAATTCAGCTTTGAGTATTTGGATGGGTCACAGGCA
AGAAACAACAAAAATTTATTTATTCATTGATAAATTTTCCCCCTACTCTA
TGGTAGAGCATCTTCAGATCTAACATAACTCATAAAAAAAACCTATCTTA
TAGCATCTAGCATCTTCAGACATTTGATTAAAAAATTATTTTTATTCCCT
AGATAAAAAATTAATTAAGTTATTCTTATGAACAATAAAATCATTAATAA
AAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAGAAT
AACTTAATTAATTTTTTATCTAGGGAATAAAAATAATTTTTTAATCAAAT
GTCTGAAGATGCTAGATGCTATAAGATAGGTTTTTTTTTTATGAGTTATG
TTAGATCTGAAGATGCTCTACCATAGAGTAGGGGGAAAATTTATCAATGA
ATAAATAAATTTTTGTTGTTTCTTGCCTGTGACCCATCCAAATACTCAAA
GTTTTAATAATGGAAAGGCAATCACTGAAGAGTTTTATAACAAAAATTCA
GCTTTTCCAAAAATATCACCCACATAGGAATATCTTGTTTTACCAAATTC
TTATATTTCGTAACGAGTTTTGATGAACACAGTTGTATTTTTTGGTATTT
TTATCTGTAAAGAAGGTAAAGTGTCAAGAGAAAAGTTTGCTTGCTGTTTT
TGATGATTTTTTGAAATTTCAACATTAAAAAAAAGTCAGTTTTTTGAAAT
AATTTTCGAATTACTTTTTCAAACCTAATGCATGATAGCTCAAAATTCAA
GTTAGAGCATCCTCTATGCGATAAAAAAAAATGAACAAAAAATATAAATC
CTTAAGCTCACAATATCTCAATAAAGTCGTATACTTTTTTTTGGTGACCC
GGTATACCGAGTTACTAATTGTTTTTCTTTTATAGATAATAACATTTTGC
TACTGAATCCTGAACAAGAAAAAGATAGAACAAACTTCCTGGATAAGGAA
GTAAGACTTTTATAATAAATCATTAGTCATAATCGTTTGTGAAATTTTGC
GATTGTGAGTAATTTCTTTTGAGCTTTTATGCTTCATGGTTTCAGCCCTC
TCCCAAATTTTTCATCGTCATAATATTTTCATAATTACTTTCTTGCATAA
GCTTAAAAAAGAAAAATGATTTTAAATGAATGCTCTGACCATTGCTATAT
AACTTACTTCTGTAATTTAGTGTCAGTTTTAACAATAAAGGCCGGTCATA
TCAACTTAAAATTTTATTCCACCATAGACTAACGTTGAGTTGGAAATATT
GGACAAAATGCCGCTCTTGGAATGGCTTGCTAATAATTACAAATCCTTCG
GTAGGTTTACGAACATTCTTTCGAATCATTTCTGCTTACAATTGCCTTAA
GACAAAAGTTTTAAAACACTCATAAATTTAGGAACGCGTAAAAGTGTTTT
AACGAGTTTGAACAAAACCCACGAAATTCGCCAAAATTACTTTTTGCTGA
AATCAGTTCCCTTAGGTATCTTTCTAAATAAAACAAGAGACTGATTGTGG
TAATTTTCTTTGCAAAGGTGCTGCATTGGAAATCGTTACAGATCGTTCAC
AAGAAGGCTCGCAATTTTGTCGTGGTTTCGGTGGTATTGGAGGTGAGACT
TCTTCCCTCTCCGATAACTGTTATCATTAATTTTCTAAACACTTACTGCC
ACTTAAACGATGACATGTGATGGTAGATATTAAGTACCCGGGAAATTTTG
TAACATGCGAAATTTAATACCATTTTAAAGGTACACTCTTGTTTCATAAG
AACCAGTAATTTTTTAATTGCGACTTAGCTGTACTTATATTTTGTCACTT
TGAGCCTCAATGGTGTAATCGTGCTTTTTTTGACGAGTTTGAGCCTGCTT
CTCATAAGATTGTTCTTATAAAAAAAACCATGTTCGATTTGAATTCAGAT
TTTGAAACACAATTTTGTGAGCCTGTAAACAAATACCAGAAGGAACATTA
TTTTTTTCTGAGATTTTTGAGCCAATATAATTGTCTCCGCGACCACGGTG
AGTTATATATGAATCTCTTTTATCACCAGTAGAATGGTATATAAACAAAA
ATATGTACAGGTTAAAAAGAAGAAAATTATGTTATGAAAGGTTCATTCTC
ATTTTAGGCTAGTACTCAACGAACCGTTATGTAACCTAGGTATTGGCATT
TTATTTTTACTTTTCAATCGTCAGGTTTACTGCGGTACAAAGTGGACTTT
CAATCGATGGACTACGATGATTTGGATGACCTTGACTATTACGATGATGA
CGATGAATCTCTCTTCTAAATAGTGAACAAAAAATGAAAGATTTTATCAA
ATCATCCCATCATCGGTATAAATACACAGAAAGTGCAATACAGTGAAGTT
TCATTACGAAACGCCATTGAACTGTTGATACCGAAGAGCAACTGAATGGT
TCCATCCTATGGCTGGTGGCACGAAAAACAGTTCGCTTTTAATGATTTTG
ACGTTAAAGATGGGGGTGTCTCCTCTATAAGTGAAACAAACGACGACCTA
ATGACGTTTCAGCAATAACTGTAGAAGACAAGAAAGAAGCCTTTGAATAG
GCTCATCAGAAACGAGGGCGATATTTTATTTTTGAAAATCGAGATTTTAT
TTTATTTGGTTTTTATTGTAGTTCTCCATTGTTGTTTTTTCTTATTTGTT
CGCCATTCTCCAAAAAGACTTTTATCGTGAAAAGTCCAAGACAAGGTTTT
TACAAATTCGCCGACGTAGATTCCAATGAAAACCAGAATGTTATCTCTCA
TTTAGCATGACCTTAAATAGTAAAGTAAATTTTGTGTTTTATTACTGGGC
ATTTGTATTTTTGTGTATTTATTCAGATAATTTCAGAATAACAGAATTGT
GTCAATCGTTCATATTTGTCTGACTTCCAATTTAAGAGTTGCCTAACGAC
TACCCAACGAGGGTTGTTCCAGAAGCTTTTTTTTATATATATTCTAAAAA
ACATCGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007198XLOC_007198Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012836-exon-sc0000156-1575043694:347813..347892TCONS_00012836-exon-sc0000156-1575043694:347813..347892Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1575043694:346326..346391TCONS_00012836-exon-sc0000156-1575043694:346326..346391Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1575043694:346101..346164TCONS_00012836-exon-sc0000156-1575043694:346101..346164Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1575043694:344292..344359TCONS_00012836-exon-sc0000156-1575043694:344292..344359Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1575043694:344025..344112TCONS_00012836-exon-sc0000156-1575043694:344025..344112Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1575043694:340693..340757TCONS_00012836-exon-sc0000156-1575043694:340693..340757Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1575043694:340343..340415TCONS_00012836-exon-sc0000156-1575043694:340343..340415Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1575043694:340051..340125TCONS_00012836-exon-sc0000156-1575043694:340051..340125Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1575043694:338684..339468TCONS_00012836-exon-sc0000156-1575043694:338684..339468Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1510915933:347813..347892TCONS_00012836-exon-sc0000156-1510915933:347813..347892Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1510915933:346326..346391TCONS_00012836-exon-sc0000156-1510915933:346326..346391Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1510915933:346101..346164TCONS_00012836-exon-sc0000156-1510915933:346101..346164Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1510915933:344292..344359TCONS_00012836-exon-sc0000156-1510915933:344292..344359Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1510915933:344025..344112TCONS_00012836-exon-sc0000156-1510915933:344025..344112Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1510915933:340693..340757TCONS_00012836-exon-sc0000156-1510915933:340693..340757Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1510915933:340343..340415TCONS_00012836-exon-sc0000156-1510915933:340343..340415Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1510915933:340051..340125TCONS_00012836-exon-sc0000156-1510915933:340051..340125Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1510915933:338684..339468TCONS_00012836-exon-sc0000156-1510915933:338684..339468Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1491911889:347813..347892TCONS_00012836-exon-sc0000156-1491911889:347813..347892Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1491911889:346326..346391TCONS_00012836-exon-sc0000156-1491911889:346326..346391Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1491911889:346101..346164TCONS_00012836-exon-sc0000156-1491911889:346101..346164Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1491911889:344292..344359TCONS_00012836-exon-sc0000156-1491911889:344292..344359Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1491911889:344025..344112TCONS_00012836-exon-sc0000156-1491911889:344025..344112Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1491911889:340693..340757TCONS_00012836-exon-sc0000156-1491911889:340693..340757Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1491911889:340343..340415TCONS_00012836-exon-sc0000156-1491911889:340343..340415Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1491911889:340051..340125TCONS_00012836-exon-sc0000156-1491911889:340051..340125Clytia hemisphaericaexon
TCONS_00012836-exon-sc0000156-1491911889:338684..339468TCONS_00012836-exon-sc0000156-1491911889:338684..339468Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156supercontigsc0000156:338684..347892 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.9938	14.4888	14.0121	17.9435	11.7847	10.1988	8.23067	0.0591003	33.2251	26.1754	29.258	39.3998	50.9782	41.9282	57.8064	56.8929	36.2429	53.2417	28.1131	37.0822	37.5175	45.2157	24.6565	25.6838	26.0363	22.043	33.537	44.8205	19.7353	18.5314
Blast
[Close]
BLAST of TCONS_00012836 vs. Swiss-Prot (Human)
Match: ERF1 (Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens GN=ETF1 PE=1 SV=3)

HSP 1 Score: 326.25 bits (835), Expect = 2.435e-106
Identity = 153/204 (75.00%), Postives = 179/204 (87.75%), Query Frame = 3 
Query:    3 INVAGLVIAGSADFKSELSQSDMFDGRLQAKILKVVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGKYFDEISQDTGRFCFGVDDTLKALEMGAVETLIVWENLETQRITLKNHSSDDNNILLLNPEQEKDRTNFLDKETNVELEILDKMPLLEWLANNYKSFGAALEIVTDRSQEGSQFCRGFGGIGGLLRYKVDFQSM 614
            +NVAGLV+AGSADFK+ELSQSDMFD RLQ+K+LK+VD+SYGGENGFNQAIELS EVLSNVKFIQEKKLIG+YFDEISQDTG++CFGV+DTLKALEMGAVE LIV+ENL+  R  L    +++  IL L PEQEKD+++F DKET  E E+++ MPLLEW ANNYK FGA LEIVTD+SQEGSQF +GFGGIGG+LRY+VDFQ M
Sbjct:  219 VNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGM 422
The following BLAST results are available for this feature:
BLAST of TCONS_00012836 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERF12.435e-10675.00Eukaryotic peptide chain release factor subunit 1 ... [more]
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