TCONS_00012790 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012790
Unique NameTCONS_00012790
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length339

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012790 ID=TCONS_00012790|Name=TCONS_00012790|organism=Clytia hemisphaerica|type=transcript|length=339bp
GAAATTATGTGTGATATGTTAGTGTGCTCGAAAATTCAAAAGATCATGAA
AAAATAcgtgtgaagtttttttttaatgaaatacttcattagtgaaaatT
GATACAAAAAGGTTTTGCAAAAATCGTGCGAAATACGCCAAAAGATTCCA
AAGCCCGAACATTGATACAGCAAATTTTTACCATTTATTTTCGGTTTGTC
AATCATGTTTGATAACAGTTGGCCTGAATTAACTGTAAGCAAATCTTTTC
AGGGTGGAACAACAAGCAGTTTTTCATACGGTGCATTATCACATTTCAGT
CCTTCATTGCAAAAAGTCAAGTATCTTCCAAAACAGGTA
Run BLAST on NCBI

transcript from alignment at sc0000156:153586..153924+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012790 ID=TCONS_00012790|Name=TCONS_00012790|organism=Clytia hemisphaerica|type=transcript|length=339bp|location=Sequence derived from alignment at sc0000156:153586..153924+ (Clytia hemisphaerica)
GAAATTATGTGTGATATGTTAGTGTGCTCGAAAATTCAAAAGATCATGAA
AAAATAcgtgtgaagtttttttttaatgaaatacttcattagtgaaaatT
GATACAAAAAGGTTTTGCAAAAATCGTGCGAAATACGCCAAAAGATTCCA
AAGCCCGAACATTGATACAGCAAATTTTTACCATTTATTTTCGGTTTGTC
AATCATGTTTGATAACAGTTGGCCTGAATTAACTGTAAGCAAATCTTTTC
AGGGTGGAACAACAAGCAGTTTTTCATACGGTGCATTATCACATTTCAGT
CCTTCATTGCAAAAAGTCAAGTATCTTCCAAAACAGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007176XLOC_007176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012790-exon-sc0000156-1491911889:153586..153924TCONS_00012790-exon-sc0000156-1491911889:153586..153924Clytia hemisphaericaexon
TCONS_00012790-exon-sc0000156-1510915933:153586..153924TCONS_00012790-exon-sc0000156-1510915933:153586..153924Clytia hemisphaericaexon
TCONS_00012790-exon-sc0000156-1575043694:153586..153924TCONS_00012790-exon-sc0000156-1575043694:153586..153924Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156supercontigsc0000156:153586..153924 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012790 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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