TCONS_00011616 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011616
Unique NameTCONS_00011616
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011616 ID=TCONS_00011616|Name=TCONS_00011616|organism=Clytia hemisphaerica|type=transcript|length=157bp
cttagatatttcaaaaaattaaaatatatcaCAAAACAATGTACAATCGG
TAGGAATAAATTAACAAGGAAAACTATTATTCATACTCTATTGGTATATA
TTTACAATGAACTGTTGGAAacgaaaaatgaaatgaaatggaATCTTTTC
ATTGGTG
Run BLAST on NCBI

transcript from alignment at sc0000130:214186..214342

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011616 ID=TCONS_00011616|Name=TCONS_00011616|organism=Clytia hemisphaerica|type=transcript|length=157bp|location=Sequence derived from alignment at sc0000130:214186..214342 (Clytia hemisphaerica)
CACCAATGAAAAGATtccatttcatttcatttttcgtTTCCAACAGTTCA
TTGTAAATATATACCAATAGAGTATGAATAATAGTTTTCCTTGTTAATTT
ATTCCTACCGATTGTACATTGTTTTGtgatatattttaattttttgaaat
atctaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006512XLOC_006512Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011616-exon-sc0000130-1491911889:214186..214342TCONS_00011616-exon-sc0000130-1491911889:214186..214342Clytia hemisphaericaexon
TCONS_00011616-exon-sc0000130-1510915933:214186..214342TCONS_00011616-exon-sc0000130-1510915933:214186..214342Clytia hemisphaericaexon
TCONS_00011616-exon-sc0000130-1575043694:214186..214342TCONS_00011616-exon-sc0000130-1575043694:214186..214342Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130supercontigsc0000130:214186..214342 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011616 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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