TCONS_00011088 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011088
Unique NameTCONS_00011088
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3101

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011088 ID=TCONS_00011088|Name=TCONS_00011088|organism=Clytia hemisphaerica|type=transcript|length=3101bp
GCTTAGCATATTATACATAttataaaattatgaaatacaAAAGGGATGTC
ATCCAACATCCATCAACGGTTACAAAAGCTTACACCATGGAACATTGACC
CAAATCAATGCACCAATGCTAGTTCCTTTTATCAAAAACTCTCGGAAcca
tctgaaaaaaaaagacgttTAGATCACCAAGTTAAACAATTCAATCTTGG
AAATGGCCAGACATTTAATGATCCGATCGCTGCAGCTGAATACCTTCTTA
AGAGAGAATATGGTGATACTTTTTTGTTCCATCAAAATCAACATGATCCC
GTCTTGATACCAGCTGAGTTCATATCGAACCAATACTGCAAGAAAGATGC
TTCGACTACCCTACTTGATTTCGAAATTGAAAAGCAAATCAAAAGGTCAC
TTGATAATCTTAAGAATAAGTCACCTTACTTCTGGTTTACCACGGCGCTG
GAAAGATTTATTCAAACTCAAAATAACGGtgaaatcaatcaaaaacaGTT
TGATCATTGGATTCTTAATGTTAAAGTGTTATATCTGGTAATCGAGAATG
TGCCACAACCTGAGGATCTAAACCTGCTATCAACAACATCATCAAACTTC
ATAACAGATTGTATCAACGAGTTGAACAAATATGCACCTACTTCTAACCT
TATCGGTATCCTCAGTCCGGTAAAAATGAAGACAGTGAAAAAGAACATTC
TTAAAGAGATAGAAAATTCGCCTACAAATCACTTGACGCTACTTTGGTTC
TTTAACTTACAAATATCAGAATGTGGAGAAAAAACTGAGCGCtccttttt
tgataaaatatacTCCCTACAGGAAGATGACATCCTTAACGATACTGTTA
TTTTGTCGGCAGTTaactttttgattgattttgagAACAAAAAACATCag
gaatttgattttctaattttctcaTGGACACGTAAATTGATCATTGGTAT
TGAAGTAAAACGTCAGCTCACTGACGAAAAGGCTTTCAACCAACTACAAA
AATAtcattctatttttcaaaataaactcGCTGATCAACTTGGACTCGGA
TGGAATTTCTTTCCAGTTATATACGTTGAAAAAGAGCTTAGCACTTTACC
GGTCACTAATCATTACATTGATTCAAACACAGATATCGAAATGTGGTTAT
CCACCATCACAAATTTATTCCTTGAGAACCAGAATCGTCAGTCTATTGAG
GATCTGAAGAAAGTGCTGCAGTTGATTGTGTTCACTATTCATCTCTCAAA
AAAGGATTATCCAAGACCAATAACTTCTTCATATTGGGTTGACTATATTT
CTGATGTGATTAACTCACTATCGAATGCTCATAACATAGTCTTCTATTCG
CAAAAACAGCTTCCTGTGATGAGTACAAACGATCCAAGTTGTAACAAact
attttttatggctggttTTGGAACAGGAAAGACATTCCTTTTACAGgaaa
aagctattttattgagcAAGATAAATGAGTTTAAAGGTGGAATTTACTAC
ATTGTATGCAATGGTAAAGGAATGCTCTTCTATGAAAGGAAACTTCATTT
GGAAAAGCATGGAATACACGTCATTTCCCGAACGAAAGATGTCCTTGATC
AGACAAATGCAGGGATATCACACGTGAAGGCTAttttctttgatgaatgg
aatgACGAGCTTGATAATGAGGACAACGATTTAATGATAAGATTATTAGA
TGAGACACCTATTTGCTGGGTTGCTCCTAGCTGTTCATATCGAGctgaaa
acaatttgaaatttatcaGTGAAAATAAGCTTAaggattttgaaattatt
aaatTGGATTTGAATCTTAGAAACACAAAAGAGATTTCAAAGAAAGCTAT
AAATATTGGTGAACAGAAGTTGTTCAAATATGCAAATGGGCTATCAGTGC
CACCTCCAAATTTTCCAGAAGGTCCAAGACCATTCTATTCAAAATCGATC
GATGATGCTTTATTTCAAGCTCGGATGATTTCTCCAACAAAAGGTATTCT
TATAGTATCGGACAACAGCCAGTTCAAAACAAatacaaaggagaaaataa
aattctttcatCGTTCAATGAAAGATTTCTCATCGAAAGAAAATCCGATT
GATTTCTTGAACGAAGGGAATGTCATTATAACATCACGTGACCTTATATC
TGGTTTTGAATGGCCAGTTATTATCTATCTTGATGAATACAATGAAAGTG
AGGATGTAGAGCACCACGAATGCAACATCATTTCCAGATGTACAAGCATG
CTTTTCATTATTGGAGAAAACGATTCTTCAGATGTAAAAACGTATCCCTA
CACTGAGATCCTTAATCTAGTAGAATTTTCAGTAGATGATCATGTGAATG
TCAGTAATATCAAATCATTTATACGAAAATGTATTGCTGACTTTCTTAAG
TATTCTACCGAACGCCAATGGTTAGAAAACATTCTTATTATTTTAAAGAA
CGGCTTTCAAATTATCTCCCTACTTGCAACAACAGCATTCACAGAAGATC
GTTCTCGTACTGTCTTATACCTCGAACAAATTATTGGTTTTCTTCTACGA
GTCCATTTAAAAGGATCTGAAAATGAATGGCTTTCCAACAAGGATGTAGT
TCGCTTGGTCCTACATTCACTTGATTCTTTGGATGGTTCATGCAACATAT
ATGATGAGAGTCATAAATGGTTTAGTGCTTGTTTGAATGATaactttctc
aaaaattatacaaattttgattttctgaaaaccATGATGAATATTAATCC
AAATCGTGAAACAAAACTCTGGACCGATTTCCAACTGAAAAGAAGCCCGG
AAATAAGATTTTCACCAGATCTCATTGTTTTCAATATCTCAATTCAAGAG
AGTTTCCATGTTAAAGTATTCAAAGTATTTATGATCAGCTACATCATCGA
TTACTTCCAACGTTTCCAGAATAATGGATTGTATGAATGGACTCAAGCTC
TTTCACTTACATTGAATCACACCATACAACAGATATCGCTAAGTAACACC
GTGGAATTTTcgatatataaaaatatttttcagttctTATTGACAAACCT
AATCACTAATAAAAGTAAAGCAATGATATACGTACCTGCTGCCATGAGCT
C
Run BLAST on NCBI

protein sequence of TCONS_00011088-protein

>TCONS_00011088-protein ID=TCONS_00011088-protein|Name=TCONS_00011088-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1018bp
MSSNIHQRLQKLTPWNIDPNQCTNASSFYQKLSEPSEKKRRLDHQVKQFN
LGNGQTFNDPIAAAEYLLKREYGDTFLFHQNQHDPVLIPAEFISNQYCKK
DASTTLLDFEIEKQIKRSLDNLKNKSPYFWFTTALERFIQTQNNGEINQK
QFDHWILNVKVLYLVIENVPQPEDLNLLSTTSSNFITDCINELNKYAPTS
NLIGILSPVKMKTVKKNILKEIENSPTNHLTLLWFFNLQISECGEKTERS
FFDKIYSLQEDDILNDTVILSAVNFLIDFENKKHQEFDFLIFSWTRKLII
GIEVKRQLTDEKAFNQLQKYHSIFQNKLADQLGLGWNFFPVIYVEKELST
LPVTNHYIDSNTDIEMWLSTITNLFLENQNRQSIEDLKKVLQLIVFTIHL
SKKDYPRPITSSYWVDYISDVINSLSNAHNIVFYSQKQLPVMSTNDPSCN
KLFFMAGFGTGKTFLLQEKAILLSKINEFKGGIYYIVCNGKGMLFYERKL
HLEKHGIHVISRTKDVLDQTNAGISHVKAIFFDEWNDELDNEDNDLMIRL
LDETPICWVAPSCSYRAENNLKFISENKLKDFEIIKLDLNLRNTKEISKK
AINIGEQKLFKYANGLSVPPPNFPEGPRPFYSKSIDDALFQARMISPTKG
ILIVSDNSQFKTNTKEKIKFFHRSMKDFSSKENPIDFLNEGNVIITSRDL
ISGFEWPVIIYLDEYNESEDVEHHECNIISRCTSMLFIIGENDSSDVKTY
PYTEILNLVEFSVDDHVNVSNIKSFIRKCIADFLKYSTERQWLENILIIL
KNGFQIISLLATTAFTEDRSRTVLYLEQIIGFLLRVHLKGSENEWLSNKD
VVRLVLHSLDSLDGSCNIYDESHKWFSACLNDNFLKNYTNFDFLKTMMNI
NPNRETKLWTDFQLKRSPEIRFSPDLIVFNISIQESFHVKVFKVFMISYI
IDYFQRFQNNGLYEWTQALSLTLNHTIQQISLSNTVEFSIYKNIFQFLLT
NLITNKSKAMIYVPAAMS
Run BLAST on NCBI

transcript from alignment at sc0000121:214722..219708+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011088 ID=TCONS_00011088|Name=TCONS_00011088|organism=Clytia hemisphaerica|type=transcript|length=4987bp|location=Sequence derived from alignment at sc0000121:214722..219708+ (Clytia hemisphaerica)
GCTTAGCATATTATACATAttataaaattatgaaatacaAAAGGGATGTC
ATCCAACATCCATCAACGGTTACAAAAGCTTACACCATGGAACATTGACC
CAAATCAATGCACCAATGCTAGTTCCTTTTATCAAAAACTCTCGGAAcca
tctgaaaaaaaaagacgttTAGATCACCAAGTTAAACAATTCAATCTTGG
AAATGGCCAGACATTTAATGATCCGATCGCTGCAGCTGAATACCTTCTTA
AGAGAGAATATGGTGATACTTTTTTGTTCCATCAAAATCAACATGATCCC
GTCTTGATACCAGCTGAGTTCATATCGAACCAATACTGCAAGAAAGATGC
TTCGACTACCCTACTTGATTTCGAAATTGAAAAGCAAATCAAAAGGTCAC
TTGATAATCTTAAGAATAAGTCACCTTACTTCTGGTTTACCACGGCGCTG
GAAAGATTTATTCAAACTCAAAATAACGGtgaaatcaatcaaaaacaGTT
TGATCATTGGATTCTTAATGTTAAAGTGTTATATCTGGTAATCGAGAATG
TGCCACAACCTGAGGATCTAAACCTGCTATCAACAACATCATCAAACTTC
ATAACAGATTGTATCAACGAGTTGAACAAATATGCACCTACTTCTAACCT
TATCGGTATCCTCAGTCCGGTAAAAATGAAGACAGTGAAAAAGAACATTC
TTAAAGAGATAGAAAATTCGCCTACAAATCACTTGACGCTACTTTGGTTC
TTTAACTTACAAATATCAGAATGTGGAGAAAAAACTGAGCGCtccttttt
tgataaaatatacTCCCTACAGGAAGATGACATCCTTAACGATACTGTTA
TTTTGTCGGCAGTTaactttttgattgattttgagAACAAAAAACATCag
gaatttgattttctaattttctcaTGGACACGTAAATTGATCATTGGTAT
TGAAGTAAAACGTCAGCTCACTGACGAAAAGGCTTTCAACCAACTACAAA
AATAtcattctatttttcaaaataaactcGCTGATCAACTTGGACTCGGA
TGGAATTTCTTTCCAGTTATATACGTTGAAAAAGAGCTTAGCACTTTACC
GGTCACTAATCATTACATTGATTCAAACACAGATATCGAAATGTGGTTAT
CCACCATCACAAATTTATTCCTTGAGAACCAGAATCGTCAGTCTATTGAG
GATCTGAAGAAAGTGCTGCAGTTGATTGTGTTCACTATTCATCTCTCAAA
AAAGGATTATCCAAGACCAATAACTTCTTCATATTGGGTTGACTATATTT
CTGATGTGATTAACTCACTATCGAATGCTCATAACATAGTCTTCTATTCG
CAAAAACAGCTTCCTGTGATGAGTACAAACGATCCAAGTTGTAACAAact
attttttatggctggttTTGGAACAGGAAAGACATTCCTTTTACAGgaaa
aagctattttattgagcAAGATAAATGAGTTTAAAGGTGGAATTTACTAC
ATTGTATGCAATGGTAAAGGAATGCTCTTCTATGAAAGGAAACTTCATTT
GGAAAAGCATGGAATACACGTCATTTCCCGAACGGTATATATTTtaggag
tttctaaacatcgaccagaaatggcgactaCGACCGACGACCCGATagat
ttgggttatcgagttttttccctttctccaacgtagagtgtctctcctta
tcatttgaatatatcatattgaagagtaagctcacTCATGTCTCATCTAT
TTTGAGCCACGTGCCCAATGcgaaaaacaaccatttcgacgctcttggag
cttgattatggtgtcattttctatccttttgtattataaGCATCAAAATA
GTTAGCTGGACAAaattctttgttttggtttgagaagctttgtatttcat
cattgaattgttatttctgtcgaaattagtcattttgtcagcataaagac
aaatagaataattgattagattcatatctctaaaactggccttcctaatt
ttttcctactgacaagttccatctattcatactaaaggcatctcattcag
cataattaaaatatttggtgtaacaaagcttacaaacatcatacttaatg
accctgtcaatatttttgtcaaatagatAAAATATATGGGAGTTTCTAAC
CATCGACCAAAAATGgtgaccacgaccagcgaccagataaatttgggtta
tggaacttatctgctctctccaccgtagagaatgtctaaatcaagtcctc
agaatactaaaaagtgacctttgaagttACCAGTCATTttattgacaaag
tgacactatttgacaaaaatattgacagggtcattaagtatgatgtttGT
AAGCTTTGTTACACCGAGTATTataattatgctgaatgagatgcctttag
tatgaatagatggaacttgtcagtaggaaaaaattagaaaggccagtttt
agagatatgaatctaatcaattattctattgtcttgaAGCTGACAAAATA
ACTATTTTCgacaataaaaataacaatctgatgatgaaatacaaagcttc
ccaaaccaatttaaaaaaattttgcgcCGCAAATTATTTTGGCTGATAGT
ataaaggatagaaattgacaccataatcaagctccaagagaGTTAAAATG
GTTGTTTTGTTTTACGCATTTGGCACGTGGCTCTAAatagatgagacagg
ggtaAGCTTATTCTTCAacacaatattttcaaataacaaACTAGAGAAGC
TCTACTGTACGTTGGAGAAAGGCAAagaactcgataacccaaatttatct
ggtcgctcgtcgtggtcgccatttttGGTCGAGGTTTAGAAACTCCCATA
TATTTTATCTattctttctaattttttcaagattttttttcatgttcTCG
TCATTTGCATTTCGTAGTACAGGtcttgtttataagaacaattttataaa
aacacgagGTATAATACTTGCTTAAACCTACAAGAATTgaagaataaaat
tcaaaacaaagattaCCTGACTGGCTAAAAAAATAGATTCAAACCCATTc
ttaagtcaaaaaagttttttttataaaggaacattaaaattttttgaagc
ctttggatgtcaattcttaactttttcagatttaagcCTAACAATGTTct
tacatgttcttattttcgccattttgtgggtatttttgtgCGTTTTTCGG
GTGTTAAAAAATCGGGTGTCCCCAAAACCTTAACATggtcttaacttgtt
cttgacatCTTGGCCATCgataagccttatgttcttgtatagtttgttct
tataaaaaacgtgtattaagaATAATCATCTAAGCCAAAATATACttgtt
ttcataggaaaagcaTTTTATTTATTCCAAGTTATATCTTACTTCTTTTA
CTTTATAGAAAGATGTCCTTGATCAGACAAATGCAGGGATATCACACGTG
AAGGCTAttttctttgatgaatggaatgACGAGCTTGATAATGAGGACAA
CGATTTAATGATAAGATTATTAGATGAGACACCTATTTGCTGGGTTGCTC
CTAGCTGTTCATATCGAGctgaaaacaatttgaaatttatcaGTGAAAAT
AAGCTTAaggattttgaaattattaaatTGGATTTGAATCTTAGAAACAC
AAAAGAGATTTCAAAGAAAGCTATAAATATTGGTGAACAGAAGTTGTTCA
AATATGCAAATGGGCTATCAGTGCCACCTCCAAATTTTCCAGAAGGTCCA
AGACCATTCTATTCAAAATCGATCGATGATGCTTTATTTCAAGCTCGGAT
GATTTCTCCAACAAAAGGTATTCTTATAGTATCGGAAAGCAGCCAGTTCA
AAACAAATACAAAGNGTCTCCATCAAAAGGTATTCTTATAGTATCGGACA
ACAGCCAGTTCAAAACAAatacaaaggagaaaataaaattctttcatCGT
TCAATGAAAGATTTCTCATCGAAAGAAAATCCGATTGATTTCTTGAACGA
AGGGAATGTCATTATAACATCACGTGACCTTATATCTGGTTTTGAATGGC
CAGTTATTATCTATCTTGATGAATACAATGAAAGTGAGGATGTAGAGCAC
CACGAATGCAACATCATTTCCAGATGTACAAGCATGCTTTTCATTATTGG
AGAAAACGATTCTTCAGATGTAAAAACGTATCCCTACACTGAGATCCTTA
ATCTAGTAGAATTTTCAGTAGATGATCATGTGAATGTCAGTAATATCAAA
TCATTTATACGAAAATGTATTGCTGACTTTCTTAAGTATTCTACCGAACG
CCAATGGTTAGAAAACATTCTTATTATTTTAAAGAACGGCTTTCAAATTA
TCTCCCTACTTGCAACAACAGCATTCACAGAAGATCGTTCTCGTACTGTC
TTATACCTCGAACAAATTATTGGTTTTCTTCTACGAGTCCATTTAAAAGG
ATCTGAAAATGAATGGCTTTCCAACAAGGATGTAGTTCGCTTGGTCCTAC
ATTCACTTGATTCTTTGGATGGTTCATGCAACATATATGATGAGAGTCAT
AAATGGTTTAGTGCTTGTTTGAATGATaactttctcaaaaattatacaaa
ttttgattttctgaaaaccATGATGAATATTAATCCAAATCGTGAAACAA
AACTCTGGACCGATTTCCAACTGAAAAGAAGCCCGGAAATAAGATTTTCA
CCAGATCTCATTGTTTTCAATATCTCAATTCAAGAGAGTTTCCATGTTAA
AGTATTCAAAGTATTTATGATCAGCTACATCATCGATTACTTCCAACGTT
TCCAGAATAATGGATTGTATGAATGGACTCAAGCTCTTTCACTTACATTG
AATCACACCATACAACAGATATCGCTAAGTAACACCGTGGAATTTTcgat
atataaaaatatttttcagttctTATTGACAAACCTAATCACTAATAAAA
GTAAAGCAATGATATACGTACCTGCTGCCATGAGCTC

Coding sequence (CDS) from alignment at sc0000121:214722..219708+

>TCONS_00011088 ID=TCONS_00011088|Name=TCONS_00011088|organism=Clytia hemisphaerica|type=CDS|length=9162bp|location=Sequence derived from alignment at sc0000121:214722..219708+ (Clytia hemisphaerica)
ATGTCATCCAACATCCATCAACGGTTACAAAAGCTTACACCATGGAACAT
TGACCCAAATCAATGCACCAATGCTAGTTCCTTTTATCAAAAACTCTCGG
AAccatctgaaaaaaaaagacgttTAGATCACCAAGTTAAACAATTCAAT
CTTGGAAATGGCCAGACATTTAATGATCCGATCGCTGCAGCTGAATACCT
TCTTAAGAGAGAATATGGTGATACTTTTTTGTTCCATCAAAATCAACATG
ATCCCGTCTTGATACCAGCTGAGTTCATATCGAACCAATACTGCAAGAAA
GATGCTTCGACTACCCTACTTGATTTCGAAATTGAAAAGCAAATCAAAAG
GTCACTTGATAATCTTAAGAATAAGTCACCTTACTTCTGGTTTACCACGG
CGCTGGAAAGATTTATTCAAACTCAAAATAACGGtgaaatcaatcaaaaa
caGTTTGATCATTGGATTCTTAATGTTAAAGTGTTATATCTGGTAATCGA
GAATGTGCCACAACCTGAGGATCTAAACCTGCTATCAACAACATCATCAA
ACTTCATAACAGATTGTATCAACGAGTTGAACAAATATGCACCTACTTCT
AACCTTATCGGTATCCTCAGTCCGGTAAAAATGAAGACAGTGAAAAAGAA
CATTCTTAAAGAGATAGAAAATTCGCCTACAAATCACTTGACGCTACTTT
GGTTCTTTAACTTACAAATATCAGAATGTGGAGAAAAAACTGAGCGCtcc
ttttttgataaaatatacTCCCTACAGGAAGATGACATCCTTAACGATAC
TGTTATTTTGTCGGCAGTTaactttttgattgattttgagAACAAAAAAC
ATCaggaatttgattttctaattttctcaTGGACACGTAAATTGATCATT
GGTATTGAAGTAAAACGTCAGCTCACTGACGAAAAGGCTTTCAACCAACT
ACAAAAATAtcattctatttttcaaaataaactcGCTGATCAACTTGGAC
TCGGATGGAATTTCTTTCCAGTTATATACGTTGAAAAAGAGCTTAGCACT
TTACCGGTCACTAATCATTACATTGATTCAAACACAGATATCGAAATGTG
GTTATCCACCATCACAAATTTATTCCTTGAGAACCAGAATCGTCAGTCTA
TTGAGGATCTGAAGAAAGTGCTGCAGTTGATTGTGTTCACTATTCATCTC
TCAAAAAAGGATTATCCAAGACCAATAACTTCTTCATATTGGGTTGACTA
TATTTCTGATGTGATTAACTCACTATCGAATGCTCATAACATAGTCTTCT
ATTCGCAAAAACAGCTTCCTGTGATGAGTACAAACGATCCAAGTTGTAAC
AAactattttttatggctggttTTGGAACAGGAAAGACATTCCTTTTACA
GgaaaaagctattttattgagcAAGATAAATGAGTTTAAAGGTGGAATTT
ACTACATTGTATGCAATGGTAAAGGAATGCTCTTCTATGAAAGGAAACTT
CATTTGGAAAAGCATGGAATACACGTCATTTCCCGAACGAAAGATGTCCT
TGATCAGACAAATGCAGGGATATCACACGTGAAGGCTAttttctttgatg
aatggaatgACGAGCTTGATAATGAGGACAACGATTTAATGATAAGATTA
TTAGATGAGACACCTATTTGCTGGGTTGCTCCTAGCTGTTCATATCGAGc
tgaaaacaatttgaaatttatcaGTGAAAATAAGCTTAaggattttgaaa
ttattaaatTGGATTTGAATCTTAGAAACACAAAAGAGATTTCAAAGAAA
GCTATAAATATTGGTGAACAGAAGTTGTTCAAATATGCAAATGGGCTATC
AGTGCCACCTCCAAATTTTCCAGAAGGTCCAAGACCATTCTATTCAAAAT
CGATCGATGATGCTTTATTTCAAGCTCGGATGATTTCTCCAACAAAAGGT
ATTCTTATAGTATCGGACAACAGCCAGTTCAAAACAAatacaaaggagaa
aataaaattctttcatCGTTCAATGAAAGATTTCTCATCGAAAGAAAATC
CGATTGATTTCTTGAACGAAGGGAATGTCATTATAACATCACGTGACCTT
ATATCTGGTTTTGAATGGCCAGTTATTATCTATCTTGATGAATACAATGA
AAGTGAGGATGTAGAGCACCACGAATGCAACATCATTTCCAGATGTACAA
GCATGCTTTTCATTATTGGAGAAAACGATTCTTCAGATGTAAAAACGTAT
CCCTACACTGAGATCCTTAATCTAGTAGAATTTTCAGTAGATGATCATGT
GAATGTCAGTAATATCAAATCATTTATACGAAAATGTATTGCTGACTTTC
TTAAGTATTCTACCGAACGCCAATGGTTAGAAAACATTCTTATTATTTTA
AAGAACGGCTTTCAAATTATCTCCCTACTTGCAACAACAGCATTCACAGA
AGATCGTTCTCGTACTGTCTTATACCTCGAACAAATTATTGGTTTTCTTC
TACGAGTCCATTTAAAAGGATCTGAAAATGAATGGCTTTCCAACAAGGAT
GTAGTTCGCTTGGTCCTACATTCACTTGATTCTTTGGATGGTTCATGCAA
CATATATGATGAGAGTCATAAATGGTTTAGTGCTTGTTTGAATGATaact
ttctcaaaaattatacaaattttgattttctgaaaaccATGATGAATATT
AATCCAAATCGTGAAACAAAACTCTGGACCGATTTCCAACTGAAAAGAAG
CCCGGAAATAAGATTTTCACCAGATCTCATTGTTTTCAATATCTCAATTC
AAGAGAGTTTCCATGTTAAAGTATTCAAAGTATTTATGATCAGCTACATC
ATCGATTACTTCCAACGTTTCCAGAATAATGGATTGTATGAATGGACTCA
AGCTCTTTCACTTACATTGAATCACACCATACAACAGATATCGCTAAGTA
ACACCGTGGAATTTTcgatatataaaaatatttttcagttctTATTGACA
AACCTAATCACTAATAAAAGTAAAGCAATGATATACGTACCTGCTGCCAT
GAGCATGTCATCCAACATCCATCAACGGTTACAAAAGCTTACACCATGGA
ACATTGACCCAAATCAATGCACCAATGCTAGTTCCTTTTATCAAAAACTC
TCGGAAccatctgaaaaaaaaagacgttTAGATCACCAAGTTAAACAATT
CAATCTTGGAAATGGCCAGACATTTAATGATCCGATCGCTGCAGCTGAAT
ACCTTCTTAAGAGAGAATATGGTGATACTTTTTTGTTCCATCAAAATCAA
CATGATCCCGTCTTGATACCAGCTGAGTTCATATCGAACCAATACTGCAA
GAAAGATGCTTCGACTACCCTACTTGATTTCGAAATTGAAAAGCAAATCA
AAAGGTCACTTGATAATCTTAAGAATAAGTCACCTTACTTCTGGTTTACC
ACGGCGCTGGAAAGATTTATTCAAACTCAAAATAACGGtgaaatcaatca
aaaacaGTTTGATCATTGGATTCTTAATGTTAAAGTGTTATATCTGGTAA
TCGAGAATGTGCCACAACCTGAGGATCTAAACCTGCTATCAACAACATCA
TCAAACTTCATAACAGATTGTATCAACGAGTTGAACAAATATGCACCTAC
TTCTAACCTTATCGGTATCCTCAGTCCGGTAAAAATGAAGACAGTGAAAA
AGAACATTCTTAAAGAGATAGAAAATTCGCCTACAAATCACTTGACGCTA
CTTTGGTTCTTTAACTTACAAATATCAGAATGTGGAGAAAAAACTGAGCG
CtccttttttgataaaatatacTCCCTACAGGAAGATGACATCCTTAACG
ATACTGTTATTTTGTCGGCAGTTaactttttgattgattttgagAACAAA
AAACATCaggaatttgattttctaattttctcaTGGACACGTAAATTGAT
CATTGGTATTGAAGTAAAACGTCAGCTCACTGACGAAAAGGCTTTCAACC
AACTACAAAAATAtcattctatttttcaaaataaactcGCTGATCAACTT
GGACTCGGATGGAATTTCTTTCCAGTTATATACGTTGAAAAAGAGCTTAG
CACTTTACCGGTCACTAATCATTACATTGATTCAAACACAGATATCGAAA
TGTGGTTATCCACCATCACAAATTTATTCCTTGAGAACCAGAATCGTCAG
TCTATTGAGGATCTGAAGAAAGTGCTGCAGTTGATTGTGTTCACTATTCA
TCTCTCAAAAAAGGATTATCCAAGACCAATAACTTCTTCATATTGGGTTG
ACTATATTTCTGATGTGATTAACTCACTATCGAATGCTCATAACATAGTC
TTCTATTCGCAAAAACAGCTTCCTGTGATGAGTACAAACGATCCAAGTTG
TAACAAactattttttatggctggttTTGGAACAGGAAAGACATTCCTTT
TACAGgaaaaagctattttattgagcAAGATAAATGAGTTTAAAGGTGGA
ATTTACTACATTGTATGCAATGGTAAAGGAATGCTCTTCTATGAAAGGAA
ACTTCATTTGGAAAAGCATGGAATACACGTCATTTCCCGAACGAAAGATG
TCCTTGATCAGACAAATGCAGGGATATCACACGTGAAGGCTAttttcttt
gatgaatggaatgACGAGCTTGATAATGAGGACAACGATTTAATGATAAG
ATTATTAGATGAGACACCTATTTGCTGGGTTGCTCCTAGCTGTTCATATC
GAGctgaaaacaatttgaaatttatcaGTGAAAATAAGCTTAaggatttt
gaaattattaaatTGGATTTGAATCTTAGAAACACAAAAGAGATTTCAAA
GAAAGCTATAAATATTGGTGAACAGAAGTTGTTCAAATATGCAAATGGGC
TATCAGTGCCACCTCCAAATTTTCCAGAAGGTCCAAGACCATTCTATTCA
AAATCGATCGATGATGCTTTATTTCAAGCTCGGATGATTTCTCCAACAAA
AGGTATTCTTATAGTATCGGACAACAGCCAGTTCAAAACAAatacaaagg
agaaaataaaattctttcatCGTTCAATGAAAGATTTCTCATCGAAAGAA
AATCCGATTGATTTCTTGAACGAAGGGAATGTCATTATAACATCACGTGA
CCTTATATCTGGTTTTGAATGGCCAGTTATTATCTATCTTGATGAATACA
ATGAAAGTGAGGATGTAGAGCACCACGAATGCAACATCATTTCCAGATGT
ACAAGCATGCTTTTCATTATTGGAGAAAACGATTCTTCAGATGTAAAAAC
GTATCCCTACACTGAGATCCTTAATCTAGTAGAATTTTCAGTAGATGATC
ATGTGAATGTCAGTAATATCAAATCATTTATACGAAAATGTATTGCTGAC
TTTCTTAAGTATTCTACCGAACGCCAATGGTTAGAAAACATTCTTATTAT
TTTAAAGAACGGCTTTCAAATTATCTCCCTACTTGCAACAACAGCATTCA
CAGAAGATCGTTCTCGTACTGTCTTATACCTCGAACAAATTATTGGTTTT
CTTCTACGAGTCCATTTAAAAGGATCTGAAAATGAATGGCTTTCCAACAA
GGATGTAGTTCGCTTGGTCCTACATTCACTTGATTCTTTGGATGGTTCAT
GCAACATATATGATGAGAGTCATAAATGGTTTAGTGCTTGTTTGAATGAT
aactttctcaaaaattatacaaattttgattttctgaaaaccATGATGAA
TATTAATCCAAATCGTGAAACAAAACTCTGGACCGATTTCCAACTGAAAA
GAAGCCCGGAAATAAGATTTTCACCAGATCTCATTGTTTTCAATATCTCA
ATTCAAGAGAGTTTCCATGTTAAAGTATTCAAAGTATTTATGATCAGCTA
CATCATCGATTACTTCCAACGTTTCCAGAATAATGGATTGTATGAATGGA
CTCAAGCTCTTTCACTTACATTGAATCACACCATACAACAGATATCGCTA
AGTAACACCGTGGAATTTTcgatatataaaaatatttttcagttctTATT
GACAAACCTAATCACTAATAAAAGTAAAGCAATGATATACGTACCTGCTG
CCATGAGCATGTCATCCAACATCCATCAACGGTTACAAAAGCTTACACCA
TGGAACATTGACCCAAATCAATGCACCAATGCTAGTTCCTTTTATCAAAA
ACTCTCGGAAccatctgaaaaaaaaagacgttTAGATCACCAAGTTAAAC
AATTCAATCTTGGAAATGGCCAGACATTTAATGATCCGATCGCTGCAGCT
GAATACCTTCTTAAGAGAGAATATGGTGATACTTTTTTGTTCCATCAAAA
TCAACATGATCCCGTCTTGATACCAGCTGAGTTCATATCGAACCAATACT
GCAAGAAAGATGCTTCGACTACCCTACTTGATTTCGAAATTGAAAAGCAA
ATCAAAAGGTCACTTGATAATCTTAAGAATAAGTCACCTTACTTCTGGTT
TACCACGGCGCTGGAAAGATTTATTCAAACTCAAAATAACGGtgaaatca
atcaaaaacaGTTTGATCATTGGATTCTTAATGTTAAAGTGTTATATCTG
GTAATCGAGAATGTGCCACAACCTGAGGATCTAAACCTGCTATCAACAAC
ATCATCAAACTTCATAACAGATTGTATCAACGAGTTGAACAAATATGCAC
CTACTTCTAACCTTATCGGTATCCTCAGTCCGGTAAAAATGAAGACAGTG
AAAAAGAACATTCTTAAAGAGATAGAAAATTCGCCTACAAATCACTTGAC
GCTACTTTGGTTCTTTAACTTACAAATATCAGAATGTGGAGAAAAAACTG
AGCGCtccttttttgataaaatatacTCCCTACAGGAAGATGACATCCTT
AACGATACTGTTATTTTGTCGGCAGTTaactttttgattgattttgagAA
CAAAAAACATCaggaatttgattttctaattttctcaTGGACACGTAAAT
TGATCATTGGTATTGAAGTAAAACGTCAGCTCACTGACGAAAAGGCTTTC
AACCAACTACAAAAATAtcattctatttttcaaaataaactcGCTGATCA
ACTTGGACTCGGATGGAATTTCTTTCCAGTTATATACGTTGAAAAAGAGC
TTAGCACTTTACCGGTCACTAATCATTACATTGATTCAAACACAGATATC
GAAATGTGGTTATCCACCATCACAAATTTATTCCTTGAGAACCAGAATCG
TCAGTCTATTGAGGATCTGAAGAAAGTGCTGCAGTTGATTGTGTTCACTA
TTCATCTCTCAAAAAAGGATTATCCAAGACCAATAACTTCTTCATATTGG
GTTGACTATATTTCTGATGTGATTAACTCACTATCGAATGCTCATAACAT
AGTCTTCTATTCGCAAAAACAGCTTCCTGTGATGAGTACAAACGATCCAA
GTTGTAACAAactattttttatggctggttTTGGAACAGGAAAGACATTC
CTTTTACAGgaaaaagctattttattgagcAAGATAAATGAGTTTAAAGG
TGGAATTTACTACATTGTATGCAATGGTAAAGGAATGCTCTTCTATGAAA
GGAAACTTCATTTGGAAAAGCATGGAATACACGTCATTTCCCGAACGAAA
GATGTCCTTGATCAGACAAATGCAGGGATATCACACGTGAAGGCTAtttt
ctttgatgaatggaatgACGAGCTTGATAATGAGGACAACGATTTAATGA
TAAGATTATTAGATGAGACACCTATTTGCTGGGTTGCTCCTAGCTGTTCA
TATCGAGctgaaaacaatttgaaatttatcaGTGAAAATAAGCTTAagga
ttttgaaattattaaatTGGATTTGAATCTTAGAAACACAAAAGAGATTT
CAAAGAAAGCTATAAATATTGGTGAACAGAAGTTGTTCAAATATGCAAAT
GGGCTATCAGTGCCACCTCCAAATTTTCCAGAAGGTCCAAGACCATTCTA
TTCAAAATCGATCGATGATGCTTTATTTCAAGCTCGGATGATTTCTCCAA
CAAAAGGTATTCTTATAGTATCGGACAACAGCCAGTTCAAAACAAataca
aaggagaaaataaaattctttcatCGTTCAATGAAAGATTTCTCATCGAA
AGAAAATCCGATTGATTTCTTGAACGAAGGGAATGTCATTATAACATCAC
GTGACCTTATATCTGGTTTTGAATGGCCAGTTATTATCTATCTTGATGAA
TACAATGAAAGTGAGGATGTAGAGCACCACGAATGCAACATCATTTCCAG
ATGTACAAGCATGCTTTTCATTATTGGAGAAAACGATTCTTCAGATGTAA
AAACGTATCCCTACACTGAGATCCTTAATCTAGTAGAATTTTCAGTAGAT
GATCATGTGAATGTCAGTAATATCAAATCATTTATACGAAAATGTATTGC
TGACTTTCTTAAGTATTCTACCGAACGCCAATGGTTAGAAAACATTCTTA
TTATTTTAAAGAACGGCTTTCAAATTATCTCCCTACTTGCAACAACAGCA
TTCACAGAAGATCGTTCTCGTACTGTCTTATACCTCGAACAAATTATTGG
TTTTCTTCTACGAGTCCATTTAAAAGGATCTGAAAATGAATGGCTTTCCA
ACAAGGATGTAGTTCGCTTGGTCCTACATTCACTTGATTCTTTGGATGGT
TCATGCAACATATATGATGAGAGTCATAAATGGTTTAGTGCTTGTTTGAA
TGATaactttctcaaaaattatacaaattttgattttctgaaaaccATGA
TGAATATTAATCCAAATCGTGAAACAAAACTCTGGACCGATTTCCAACTG
AAAAGAAGCCCGGAAATAAGATTTTCACCAGATCTCATTGTTTTCAATAT
CTCAATTCAAGAGAGTTTCCATGTTAAAGTATTCAAAGTATTTATGATCA
GCTACATCATCGATTACTTCCAACGTTTCCAGAATAATGGATTGTATGAA
TGGACTCAAGCTCTTTCACTTACATTGAATCACACCATACAACAGATATC
GCTAAGTAACACCGTGGAATTTTcgatatataaaaatatttttcagttct
TATTGACAAACCTAATCACTAATAAAAGTAAAGCAATGATATACGTACCT
GCTGCCATGAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006213XLOC_006213Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011088-proteinTCONS_00011088-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011088-exon-sc0000121-1491911889:214722..216305TCONS_00011088-exon-sc0000121-1491911889:214722..216305Clytia hemisphaericaexon
TCONS_00011088-exon-sc0000121-1510915933:214722..216305TCONS_00011088-exon-sc0000121-1510915933:214722..216305Clytia hemisphaericaexon
TCONS_00011088-exon-sc0000121-1575043694:214722..216305TCONS_00011088-exon-sc0000121-1575043694:214722..216305Clytia hemisphaericaexon
TCONS_00011088-exon-sc0000121-1491911889:218130..218538TCONS_00011088-exon-sc0000121-1491911889:218130..218538Clytia hemisphaericaexon
TCONS_00011088-exon-sc0000121-1510915933:218130..218538TCONS_00011088-exon-sc0000121-1510915933:218130..218538Clytia hemisphaericaexon
TCONS_00011088-exon-sc0000121-1575043694:218130..218538TCONS_00011088-exon-sc0000121-1575043694:218130..218538Clytia hemisphaericaexon
TCONS_00011088-exon-sc0000121-1491911889:218601..219708TCONS_00011088-exon-sc0000121-1491911889:218601..219708Clytia hemisphaericaexon
TCONS_00011088-exon-sc0000121-1510915933:218601..219708TCONS_00011088-exon-sc0000121-1510915933:218601..219708Clytia hemisphaericaexon
TCONS_00011088-exon-sc0000121-1575043694:218601..219708TCONS_00011088-exon-sc0000121-1575043694:218601..219708Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121supercontigsc0000121:214722..219708 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.110408	0.0717767	0.0972296	0.0135891	0.198522	0.0915101	0.157719	0.383901	0.0930386	0.0768289	0.037286	0.0408506	0.0815876	0.0677836	0.0557273	0.246691	1.96156	2.04829	0.273854	0.0955229	2.95338	2.42985	1.84261	2.36574	2.59471	2.77416	1.95126	1.84906	0.381249	0.388432
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011088 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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