TCONS_00009644 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00009644
Unique Name	TCONS_00009644
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	5318

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000097:616802..624108-
coding sequence from alignment at sc0000097:616802..624108-

transcript sequence

>TCONS_00009644 ID=TCONS_00009644|Name=TCONS_00009644|organism=Clytia hemisphaerica|type=transcript|length=5318bp
AAGTATGTTGTCAGAGACAAATATGGCAAATCTTTTACCCTTGAGTTGct
gacaaacaggagcaaactcttcacataaaaaagtaaaaaaaatctgTGTA
CTCAGTATTACTTTGGGAAGGGGGTTCATAATTCTTTTCTTAATCATGTT
TCGCTGCTAAGAAAGCAATAATATTAAGGTTTCTTTAATCGCCTGGGTGT
TTAAAGTTGCACTTTATAAGAAATTGTGTTATCAGTAATCTGTAGTCTGC
TAATTAAGgataaaggaaatattttttctctaaaCCTCTGTAAATGGACT
CCCTAAACACATTCAAAGATTAGTTTTCTTGGATTTTCAGAACAAAGGAA
CATGGTTTTGGTATAAGTCATTTACAATGGCTTTGTTTACGATGATTCCA
AACGtctcataaaaaagattttcaaatagaCCTTATGGATGATAGcgaaa
tgtctgaaaatgacttGAAAAGGACCCTCTACAATGTGCATCGTTTTTCA
TATTGGAATGTAATTACACAATGATATTTTTATTTACATATGTTCTATGA
TAACTTAGTATCACTCTCATGAAAATCCCATGTGAAATCACCTCTTGATA
GAGGAAAGCTATCCTAAACATCCTATctcgcttctttttttttcactcgC
CGTCTACCACCTTGAATTTTGTTTGTTCTGTTGAATGCCGAAATTGTGCC
TCCCATATTTCCATTTTTTGCTTCTTGCAAACATCCGTGGATGGGATATC
CACGGTTGGATATTTCAGGGTTGAAttaatatattatatatataataata
tatttttcgtatttttacatgcttattttttgagatttcaataataaacc
ataaaaaaaacataacagTTTGACATTCACTATTATTCTTAAGTTACTGT
TATGGTCGGTTGGGCCCATCTGCCCGAGTTATTCTAAGCTTGAAAAAACT
CTGAAAAGCTTTTTCAAGTTTAGAAGGCTTCATAATTATTCTTGTAAatg
ttagatttttttcatagtgTTTCACTGGTACTCATGTAAGGcttttttct
cttctttgaaCTTTAGTTGCTTTAAtctgaatattttgatttaatcaGTC
TGCCCAAAACTTTAATTAAGGCGTATTTCCATTTGGAACACTTTCCAATT
GAGGGTATATGAAGCAAATATGGAAAGGGGCAGTCCAGGACAAAAATCAC
GTTTTGCCAACATATATCTTTTTCCAAGCACTAGATCGAGCTACCAACTT
TATTAAAGATggtgcattattttgcttcatttaGAGACAAAATAGCTCAA
TTTATTGTTTATGAggcgttgtggtatagtggacatcaaccttgattcct
gtacaggcaacaaaggttcgattcccactcacaactgttcacttggcaag
tgaacaaacctttgcccgggtcaacccatgccatgtgaggggaattgggt
agtcagttcaaggtgctgacgggatgcttactcaaagcatctatagttgc
gagaatgggctcccagagcctcttctaactcaaccataatagatagatag
atagatagggttttgtataagatatctgtgggttTGCCCTTCAGCAAGGC
ATAGTAACCCGAAGCTGTCTGATCGGGTAAGTGGTGAAGGCAGGAGCAGA
TTGTGGGATAATGGTTGGTAGTTGATCCTCTGGTATCACCATTGACAAGC
CAAGCTGACGAGTAAGATGTTTTTGTAAGAGATTTGGTGACCAAGTTGCA
AGGTAATTACTGCAATTGTTTGTAGACCTGACCcacaaaaacattgtttc
aTTTATATCGTAATCAAACTAATTATCCTATCCTGCATTAGTTGTCATAT
AGTTCACCGAGGTTGTGTCTGGGAGAATTGGCCCTGGCTCCAGTTGAAAA
ATGAACTATCATTTCCTCTATCCACCATCATGAAATCTTGAATGGACTAT
GCTGGTTATTATAGTGCTAAAGAATTTAGTTGTCACATAACAACTTTAAC
ATGGTATACCTGCTGAATGCTGGAAGACCACATAAAGTCTGCTTTCAGTG
GCTCATTGAAGACACTAGCTTGGAATCCATTGCTGAACTCAAGACACAAA
TGACGGGCATAGCTTTTTGGAGAAAGAGTAAAATAAGATTTGTTTGAGTA
ATCAATCTATTCATGTAAATGGCTGTAAATGGCTGTGAAAGCCATCAAAA
GTGGTCAGACATGACAGGAACCTTACCATCCTGTTTGTAAGGAGAATGCC
AGCTtgtgttcttttcttttttttcttctttttttttagctGGAAGGAGA
GTATGTGTTTTAAGTTTGCAAAATTCATTCAGTTAAAGATTTTATATGAA
AAGAATGTTTTCAAAGATTGATACAATCTTTCTTAAATTTAGATTTTAct
acatatcatgaataagataGAAATACTGATCTTTATTGGCATTGTTCTAT
ACAGCTACTATGTGTTGATTAATTTTCTGGAGAAAAGGTCATCTgttaaa
tttttgaacaaaactcaacatACAGGTACTGTGGTTCTTGCACTCGGTGA
TAGTTTGACAGAAGGGCTATACGATAGAGAAAAACTATTATTTCATGCAT
ATACACTCGAACTGAAGAGGCTGTTGTCCAAGAataagaaaatcaaagat
gatttAACTTTAATCAATGCAGGTGTTAGTGGAGAAAGGACTTCACAAAT
TCACAAACGCCTTTTGTCTCATCTTGTGTCATCGCAACAGTTTACGGTAG
CTATTATTCTTGCTGGTACTAACGACTTTATGGACATAATAAGAAAAGTT
GGTGAGAGTGAGACACATCTGAACGCAAGTTGTGTTGACTTAGCGAGACA
AATTCAAGCACTTCATAACATGTGTCATAGTAAAAGCATCATGACTGTTT
TACTAACAATACCTGAAATTACAAACGAACGGGATGACAAGCGggatgtt
tttcaaaaattcaaacacTGTAGAACTATTGTTAATTACCAATTGCGATC
TTATGCTAATGGACTGCCACCTAAATTAACTGTTTTAGTAGACTTTGAGA
AGTTCGTTTCCgataaaacagacaaaaaagaCGAAAGGGGAAAGTTTTGG
TCAGATAATGTCCATTTTACCCCTTATGGTTACGACGAGATGGGatcttt
tatttataagaaaatgaaatatatCTTATGAGAGAGTAAATATCTTGATT
TTGCACAGGAACATCTGACAACCTTTAATACAAATTTGACTTTCGGAAAA
TCTGATATTTTGTGATCTGATTCGTTNTATCTGACAATCTTTCATACAAA
TTTGACTTTCGGAAAATCTGATATTTTGTGATCTGATtcgtttttaagca
tttttaacCGTTGTAGATATTAAACCATTTGTATTTTTACATTTGATAAT
ATTAATAATTTCATTTCTCGGGAAAATTACCTTTTCAAGTTAAAGCATGC
GAGATTTGGACTTGATTCCCATTATCATCCTCTTCTCTAGCCATTTATAT
GTATCATGCATAGCGATATCTCTTTGCCTTTGAGCGTTATTTACAATTAT
ATCCATTGATTTTTCCATAGCTGTGAATAAACATAAAACATACATATAAA
TTACACAATGGAGACCGTCATTGAGCAACAACGAAGATGCCACGAAGAGA
GAGAACGACTGGAAGGCGGTATGACACAAGAATTGTTAttgaaaaagaac
aatttgaaaGAACAAATCAATTCGGATCATCGGGTTCACTTTCTGTTGGA
TCGATATATGGAAGTCACTGATAAATTGAAGAAGTACTACACTGATGACG
ACTCACTGAGACAAGAAGAAATCAACTCCATCGCTGGTCCTAATGAATTT
GCAGAATTTTATGGTCGTTTGAGGACCATCAAACAATATCACCGCAAATA
CCCAAACGAAGTTGCTGAACCCATGCAAATGGAGTTCCTCAGGTTGAAAG
ATTTACGTGAAAAGCCTGGCGAAGAACAAGAAGTTTTGGTCGAATTTTCA
GACGAAGAAGGTTTCGGTAAATACCTGGACCTCCACGAAGCATACAACAT
GTACATCAATCTCAAAGGAATCGAACACATTGATTATCTCACTTTCCTCA
TGTCTTTTGACCGTTTGTTTGAAATcgcaaaagaaaagaagaaccacgaa
tacaagaaatatttgaacAAAGTGCTTGATTACTTGTATAGCTTTTTGCA
GCGAACGAAACCTCTTTTGAACCTGGAGAGGGAACTGAAAGAAGCTGATG
AGGACTTTCAAAGCAAATACGAACACGGAAATTTCATGGGTTGGCCCAAA
GAAACTGGAAGTGCACTTGCTCACTCAGGTGCACATTTGGACCTTTCGGC
TTTTTCCTCACCCGAAGAGTTGATGTCTCTTGGTTTGGATCGATTGAAAT
CAGCCTTACAGGCGTTGAGTATGAAATGTGGCGGAACATTAGAAGAAAGA
GCAAAAAGACTATTTGGCACTAAAGGTGTCAGCCTGGAAGATTTAAAGTC
GACACAGGGCGGAAAGAAAGGGCGTGGTAAAAGTAAAGGAATTGATAACG
CCAAACGGCAAAGAGAATTAGCAGCTCTAGAATCTCAGGTGTACCGGCTA
GTTGAGTTGGTTGGCGAAGAACGGCAAGCGACGCGCGAGAACGTTGAACG
GAAACAAGCGCGTACGGCGAACGAACTAGAAgatgacgaagaagaaaatg
caTTGGATGAAGAAAGTGACGATGAAGAAGAACAAACGCTTTACAATCCA
AAGAAACTCCCTCTCGGCTGGGACGGGAAACCAATACCCTACTGGCTTTA
CAAATTACACGGCTTGAATCTCTATTACCCATGCGAAATTTGTGGCAATC
AGAAATACAGAGGTCCAAAAGCTTTCCAAAGACATTTCTCAGAGTGGCGC
CATGCGCATGGTATGCGTGTTTTGAACATACCTAACACAGCGCATTTCGC
AAACGTCACAAAGATCGAAGACGCCCTTTCTCTTTGGGAGAAATTGAAAG
AAGAGAAAGCTAAAGAGAGGTTCCAACCTGACGCGGACGAAGAATTCGAA
GATTCTGTGGGAAATGTCGTTAATAAGAAAACTTTCGAAGATCTCTCTCG
ACAGGGATTACTTTAAGCAATTCCCTAGGCTTACTCTTAGCATCTTTTTA
TGCTAGCAAAGAGTGCTACAATGTCAGAATTTTTATTATTGGGTATATAC
TACATACAACTGCTCTGAAAATGCATACTCGCAACTAGTAGCATAATGAA
TATATGGGTGATATAAACCCAGTCACTATTCCAATTATATGAATTTATAT
GGAAGGAAAGATCCCGAT

Run BLAST on NCBI

protein sequence of TCONS_00009644-protein

>TCONS_00009644-protein ID=TCONS_00009644-protein|Name=TCONS_00009644-protein|organism=Clytia hemisphaerica|type=polypeptide|length=502bp
METVIEQQRRCHEERERLEGGMTQELLLKKNNLKEQINSDHRVHFLLDRY
MEVTDKLKKYYTDDDSLRQEEINSIAGPNEFAEFYGRLRTIKQYHRKYPN
EVAEPMQMEFLRLKDLREKPGEEQEVLVEFSDEEGFGKYLDLHEAYNMYI
NLKGIEHIDYLTFLMSFDRLFEIAKEKKNHEYKKYLNKVLDYLYSFLQRT
KPLLNLERELKEADEDFQSKYEHGNFMGWPKETGSALAHSGAHLDLSAFS
SPEELMSLGLDRLKSALQALSMKCGGTLEERAKRLFGTKGVSLEDLKSTQ
GGKKGRGKSKGIDNAKRQRELAALESQVYRLVELVGEERQATRENVERKQ
ARTANELEDDEEENALDEESDDEEEQTLYNPKKLPLGWDGKPIPYWLYKL
HGLNLYYPCEICGNQKYRGPKAFQRHFSEWRHAHGMRVLNIPNTAHFANV
TKIEDALSLWEKLKEEKAKERFQPDADEEFEDSVGNVVNKKTFEDLSRQG
LL

Run BLAST on NCBI

transcript from alignment at sc0000097:616802..624108-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00009644 ID=TCONS_00009644|Name=TCONS_00009644|organism=Clytia hemisphaerica|type=transcript|length=7307bp|location=Sequence derived from alignment at sc0000097:616802..624108- (Clytia hemisphaerica)
AAGTATGTTGTCAGAGACAAATATGGCAAATCTTTTACCCTTGAGTTGCT
GACAAACAGGAGCAAACTCTTCACATAAAAAAGTAAAAAAAATCTGTGTA
CTCAGTATTACTTTGGGAAGGGGGTTCATAATTCTTTTCTTAATCATGTT
TCGCTGCTAAGAAAGCAATAATATTAAGGTTTCTTTAATCGCCTGGGTGT
TTAAAGTTGCACTTTATAAGAAATTGTGTTATCAGTAATCTGTAGTCTGC
TAATTAAGGATAAAGGAAATATTTTTTCTCTAAACCTCTGTAAATGGACT
CCCTAAACACATTCAAAGATTAGTTTTCTTGGATTTTCAGAACAAAGGAA
CATGGTTTTGGTATAAGTCATTTACAATGGCTTTGTTTACGATGATTCCA
AACGTCTCATAAAAAAGATTTTCAAATAGACCTTATGGATGATAGCGAAA
TGTCTGAAAATGACTTGAAAAGGACCCTCTACAATGTGCATCGTTTTTCA
TATTGGAATGTAATTACACAATGATATTTTTATTTACATATGTTCTATGA
TAACTTAGTATCACTCTCATGAAAATCCCATGTGAAATCACCTCTTGATA
GAGGAAAGCTATCCTAAACATCCTATCTCGCTTCTTTTTTTTTCACTCGC
CGTCTACCACCTTGAATTTTGTTTGTTCTGTTGAATGCCGAAATTGTGCC
TCCCATATTTCCATTTTTTGCTTCTTGCAAACATCCGTGGATGGGATATC
CACGGTTGGATATTTCAGGGTTGAATTAATATATTATATATATAATAATA
TATTTTTCGTATTTTTACATGCTTATTTTTTGAGATTTCAATAATAAACC
ATAAAAAAAACATAACAGTTTGACATTCACTATTATTCTTAAGTTACTGT
TATGGTCGGTTGGGCCCATCTGCCCGAGTTATTCTAAGCTTGAAAAAACT
CTGAAAAGCTTTTTCAAGTTTAGAAGGCTTCATAATTATTCTTGTAAATG
TTAGATTTTTTTCATAGTGTTTCACTGGTACTCATGTAAGGCTTTTTTCT
CTTCTTTGAACTTTAGTTGCTTTAATCTGAATATTTTGATTTAATCAGTC
TGCCCAAAACTTTAATTAAGGCGTATTTCCATTTGGAACACTTTCCAATT
GAGGGTATATGAAGCAAATATGGAAAGGGGCAGTCCAGGACAAAAATCAC
GTTTTGCCAACATATATCTTTTTCCAAGCACTAGATCGAGCTACCAACTT
TATTAAAGATGGTGCATTATTTTGCTTCATTTAGAGACAAAATAGCTCAA
TTTATTGTTTATGAGGCGTTGTGGTATAGTGGACATCAACCTTGATTCCT
GTACAGGCAACAAAGGTTCGATTCCCACTCACAACTGTTCACTTGGCAAG
TGAACAAACCTTTGCCCGGGTCAACCCATGCCATGTGAGGGGAATTGGGT
AGTCAGTTCAAGGTGCTGACGGGATGCTTACTCAAAGCATCTATAGTTGC
GAGAATGGGCTCCCAGAGCCTCTTCTAACTCAACCATAATAGATAGATAG
ATAGATAGGGTTTTGTATAAGATATCTGTGGGTTTGCCCTTCAGCAAGGC
ATAGTAACCCGAAGCTGTCTGATCGGGTAAGTGGTGAAGGCAGGAGCAGA
TTGTGGGATAATGGTTGGTAGTTGATCCTCTGGTATCACCATTGACAAGC
CAAGCTGACGAGTAAGATGTTTTTGTAAGAGATTTGGTGACCAAGTTGCA
AGGTAATTACTGCAATTGTTTGTAGACCTGACCCACAAAAACATTGTTTC
ATTTATATCGTAATCAAACTAATTATCCTATCCTGCATTAGTTGTCATAT
AGTTCACCGAGGTTGTGTCTGGGAGAATTGGCCCTGGCTCCAGTTGAAAA
ATGAACTATCATTTCCTCTATCCACCATCATGAAATCTTGAATGGACTAT
GCTGGTTATTATAGTGCTAAAGAATTTAGTTGTCACATAACAACTTTAAC
ATGGTATACCTGCTGAATGCTGGAAGACCACATAAAGTCTGCTTTCAGTG
GCTCATTGAAGACACTAGCTTGGAATCCATTGCTGAACTCAAGACACAAA
TGACGGGCATAGCTTTTTGGAGAAAGAGTAAAATAAGATTTGTTTGAGTA
ATCAATCTATTCATGTAAATGGCTGTAAATGGCTGTGAAAGCCATCAAAA
GTGGTCAGACATGACAGGAACCTTACCATCCTGTTTGTAAGGAGAATGCC
AGCTTGTGTTCTTTTCTTTTTTTTCTTCTTTTTTTTTAGCTGGAAGGAGA
GTATGTGTTTTAAGTTTGCAAAATTCATTCAGTTAAAGATTTTATATGAA
AAGAATGTTTTCAAAGATTGATACAATCTTTCTTAAATTTAGATTTTACT
ACATATCATGAATAAGATAGAAATACTGATCTTTATTGGCATTGTTCTAT
ACAGCTACTATGTGTTGATTAATTTTCTGGAGAAAAGGTCATCTGTTAAA
TTTTTGAACAAAACTCAACATACAGGTACTGTGGTTCTTGCACTCGGTGA
TAGTTTGACAGAAGGGCTATACGATAGAGAAAAACTATTATTTCATGCAT
ATACACTCGAACTGAAGAGGCTGTTGTCCAAGAATAAGAAAATCAAAGAT
GATTTAACTTTAATCAATGCAGGTGTTAGTGGAGAAAGGACTTCACAAAT
TCACAAACGCCTTTTGTCTCATCTTGTGTCATCGCAACAGTTTACGGTAG
CTATTATTCTTGCTGGTACTAACGACTTTATGGACATAATAAGAAAAGTT
GGTGAGAGTGAGACACATCTGAACGCAAGTTGTGTTGACTTAGCGAGACA
AATTCAAGCACTTCATAACATGTGTCATAGTAAAAGCATCATGACTGTTT
TACTAACAATACCTGAAATTACAAACGAACGGGATGACAAGCGGGATGTT
TTTCAAAAATTCAAACACTGTAGAACTATTGTTAATTACCAATTGCGATC
TTATGCTAATGGACTGCCACCTAAATTAACTGTTTTAGTAGACTTTGAGA
AGTTCGTTTCCGATAAAACAGACAAAAAAGACGAAAGGGGAAAGTTTTGG
TCAGATAATGTCCATTTTACCCCTTATGGTTACGACGAGATGGGATCTTT
TATTTATAAGAAAATGAAATATATCTTATGAGAGAGTAAATATCTTGATT
TTGCACAGGAACATCTGACAACCTTTAATACAAATTTGACTTTCGGAAAA
TCTGATATTTTGTGATCTGATTCGTTNTATCTGACAATCTTTCATACAAA
TTTGACTTTCGGAAAATCTGATATTTTGTGATCTGATTCGTTTTTAAGCA
TTTTTAACCGTTGTAGATATTAAACCATTTGTATTTTTACATTTGATAAT
ATTAATAATTTCATTTCTCGGGAAAATTACCTTTTCAAGTTAAAGCATGC
GAGATTTGGACTTGATTCCCATTATCATCCTCTTCTCTAGCCATTTATAT
GTATCATGCATAGCGATATCTCTTTGCCTTTGAGCGTTATTTACAATTAT
ATCCATTGATTTTTCCATAGCTGTGAATAAACATAAAACATACATATAAA
TTACACAATGGAGACCGTCATTGAGCAACAACGAAGATGCCACGAAGAGA
GAGAACGACTGGAAGGCGGTATGACACAAGAATTGTTATTGAAAAAGAAC
AATTTGAAAGAACAAATCAATTCGGATCATCGGGTTCACTTTCTGTTGGA
TCGATATATGGAAGTCACTGGTAAGAATGTATTATTTTCATTATTTTATG
TGAAGTAAAGTTTTCTTTCAGGAGAACTATTTTAGCTAAACACAAAGGTT
TGTACGTCAGAATTACTTGTATTTTATGCATATTGTGAAACTGGTTTGGA
AAAGACCAAAACTATGGACTCCTGGTTCACCACCTTTAGCTGATTACATT
TACATCATTTTGCAGAAGAGAATACTTTCTTTTTTGAAATGCATGAAATT
ATTGCGAACCTCATTTTCAAAGTATTGTTACCAACGGCGTCCGGCATTGC
CAATGTTTGCCAGCGTTCGCGGTTTTGTATTATAATTGATAACAGTCTTT
TGGGATAACATATTACATGACATGTGTGTAAATGTCTTTTAAAGAAACGT
AGTTGTTACGTTTGAAAACGAGGCCTGCAATGATGTTGTTTTTCTGCAGA
AGTGTGTAGTATTGACCAGATCATTGCGAGACGATGTTTGATTTCTTTTC
ATCGACAGATAAATTGAAGAAGTACTACACTGATGACGACTCACTGAGAC
AAGAAGAAATCAACTCCATCGCTGGTCCTAATGAATTTGCAGAATTTTAT
GGTCGTTTGAGGACCATCAAACAATATCACCGCAAATACCCAAACGAAGT
TGCTGAACCCATGCAAATGGAGTTCCTCAGGTTAGAATTTTCTTTTAAGC
TTTTAAAGCATTCGGTTGAAGCTGTAAAGTACTCGTCAAATATCTATCCT
TATGAAGGGGTCTTCGGCTTCATTAAACTGGATCTACAACGACGCCTGTA
TATTTTACATGAATGATTTGTATTCATGATATGCACCATTGCAATGTCTT
CAACAGACCTGTTAGGTCTGGTTGAAAAACTAATTGGTTGAAAGTGACGT
ATTGACTGATTTTACGTCACTTACAACCAATCAGATATTGGGTCTGTGAT
GTCATATCATTGCAATGGTGCATATCGTGAATAGTAAAAATTTGATACCA
GAGCCGTGTTATAGTGCTCGATTATTTATTTAGTTACATCGTGATATGTC
AAGTATTTTTGAGAGATATTCGACGAAATCATTTTCAAGGGGTCACCATT
TGGTACCAAGACGTATATCTGCTCATTAAACTCTGTTTGATAGCAAACTA
CTAAGTTGAGGTCTACAATGAGATTTTAACTCGCGACTTTTACATCACTA
GTGCAACTGCTTTACCGACTGAGCTATTAAGTCCACACTGGAAGCTTGAT
AATTTCGAAACTTTGTATCTTCACATTCTGCAGGTTGAAAGATTTACGTG
AAAAGCCTGGCGAAGAACAAGAAGTTTTGGTCGAATTTTCAGACGAAGAA
GGTTTCGGTAAATACCTGGACCTCCACGAAGCATACAACATGTACATCAA
TCTCAAAGGAATCGAACACATTGATTATCTCACTTTCCTCATGTCTTTTG
ACCGTTTGTTTGAAATCGCAAAAGAAAAGAAGAACCACGAATACAAGAAA
TATTTGAACAAAGTGCTTGATTACTTGTATAGCTTTTTGCAGCGAACGAA
ACCTCTTTTGAACCTGGAGAGGGAACTGAAAGAAGCTGATGAGGACTTTC
AAAGCAAATACGAACACGGAAATTTCATGGGTTGGCCCAAAGAAACTGGA
AGTGCACTTGCTCACTCAGGTACTTAAAGATTTAAAATTCCTTTTGGTGG
TATATATTTAATAATAGATGTTTTTAAAGCAATCCAAAGAGTTTTAACTC
AAAGCATTATACTAAAATTGCGCAGAAAAAGGTAGATTAAAATCGTTTAT
AACACATGTTATACAAACAGTAGTGTTAATTTTCGATGCAATAATTGTTA
TGGGATCATATATGTTTGTATTAAACAATTGATACCTTCAACCTTTCTGA
AGATACCTCTCCTTCTTTTTATATTAAGTCGTCTAGCATGCTAAACTACG
GCAACAAAGTGGAAAAATAAGGCAAATACGGTAACTGCATTAGCAAACAA
ATAGTGTTAGAAATTTGATTTTTTTGTAGGTTTTATGTTATGTTATGCTT
CATTTTTTCAGGTGCACATTTGGACCTTTCGGCTTTTTCCTCACCCGAAG
AGTTGATGTCTCTTGGTTTGGATCGATTGAAATCAGCCTTACAGGCGTTG
AGTATGAAATGTGGCGGAACATTAGAAGAAAGAGCAAAAAGACTATTTGG
CACTAAAGGTGTCAGCCTGGAAGATTTAAAGTCGACACAGGGCGGAAAGA
AAGGGCGTGGTAAAAGTAAAGGAATTGATAACGCCAAACGGCAAAGAGAA
TTAGCAGCTCTAGAATCTCAGGTAAGCAGTATTTTCTATTTCTAGTTTTC
CATGTTTTTACATTGTTTGTTCGATAATTTTCTACATATTCAGGGGTAGA
CCTCATTTCATAGATAATATAGGTATTATGATACTATGACATGCACATTC
AATTTATTTTGCAATATTTTCTCGCTTTCATAAGTAAGTCTTCTTTCTAT
GTTTACAATTCTAAATTTTTTTCTTGAGCACTTAAGTTCGCATTTAGATC
ACATTTGATGAATCAATTTAGCTTTTCTCCATCAGGTGTACCGGCTAGTT
GAGTTGGTTGGCGAAGAACGGCAAGCGACGCGCGAGAACGTTGAACGGAA
ACAAGCGCGTACGGCGAACGAACTAGAAGATGACGAAGAAGAAAATGCAT
TGGATGAAGAAAGTGACGATGAAGAAGAACAAACGCTTTACAATCCAAAG
AAACTCCCTCTCGGTATGTCTCATTGTTTCATCTCTCTTTTGACCTCGGA
TACTGTATGTTCCTAAACAGCATTTTATGAAGATTCGATAATTGCGGAAC
AGTCAATTCAACTGCATTTTTGCAGACAAATTCTTTTGATTTTCAGTTCT
CAATTTCAGATTTTATAATTTCCATATTATATCTAGTACTAACGATTAGC
TGGGACTGGTCTCTTAAAATTCTAACCCTGTATTTTTCTTTCCATTTCAT
TACAGGCTGGGACGGGAAACCAATACCCTACTGGCTTTACAAATTACACG
GCTTGAATCTCTATTACCCATGCGAAATTTGTGGCAATCAGAAATACAGA
GGTCCAAAAGCTTTCCAAAGACATTTCTCAGAGTGGCGCCATGCGCATGG
TATGCGTGTTTTGAACATACCTAACACAGCGCATTTCGCAAACGTCACAA
AGATCGAAGACGCCCTTTCTCTTTGGGAGAAATTGAAAGAAGAGAAAGCT
AAAGAGAGGTTCCAACCTGACGCGGACGAAGAATTCGAAGATTCTGTGGG
AAATGTCGTTAATAAGAAAACTTTCGAAGATCTCTCTCGACAGGGATTAC
TTTAAGCAATTCCCTAGGCTTACTCTTAGCATCTTTTTATGCTAGCAAAG
AGTGCTACAATGTCAGAATTTTTATTATTGGGTATATACTACATACAACT
GCTCTGAAAATGCATACTCGCAACTAGTAGCATAATGAATATATGGGTGA
TATAAACCCAGTCACTATTCCAATTATATGAATTTATATGGAAGGAAAGA
TCCCGAT

Coding sequence (CDS) from alignment at sc0000097:616802..624108-

>TCONS_00009644 ID=TCONS_00009644|Name=TCONS_00009644|organism=Clytia hemisphaerica|type=CDS|length=9054bp|location=Sequence derived from alignment at sc0000097:616802..624108- (Clytia hemisphaerica)
GCTGGGACGGGAAACCAATACCCTACTGGCTTTACAAATTACACGGCTTG
AATCTCTATTACCCATGCGAAATTTGTGGCAATCAGAAATACAGAGGTCC
AAAAGCTTTCCAAAGACATTTCTCAGAGTGGCGCCATGCGCATGGTATGC
GTGTTTTGAACATACCTAACACAGCGCATTTCGCAAACGTCACAAAGATC
GAAGACGCCCTTTCTCTTTGGGAGAAATTGAAAGAAGAGAAAGCTAAAGA
GAGGTTCCAACCTGACGCGGACGAAGAATTCGAAGATTCTGTGGGAAATG
TCGTTAATAAGAAAACTTTCGAAGATCTCTCTCGACAGGGATTACTTTAA
GTGTACCGGCTAGTTGAGTTGGTTGGCGAAGAACGGCAAGCGACGCGCGA
GAACGTTGAACGGAAACAAGCGCGTACGGCGAACGAACTAGAAGATGACG
AAGAAGAAAATGCATTGGATGAAGAAAGTGACGATGAAGAAGAACAAACG
CTTTACAATCCAAAGAAACTCCCTCTCGGTGCACATTTGGACCTTTCGGC
TTTTTCCTCACCCGAAGAGTTGATGTCTCTTGGTTTGGATCGATTGAAAT
CAGCCTTACAGGCGTTGAGTATGAAATGTGGCGGAACATTAGAAGAAAGA
GCAAAAAGACTATTTGGCACTAAAGGTGTCAGCCTGGAAGATTTAAAGTC
GACACAGGGCGGAAAGAAAGGGCGTGGTAAAAGTAAAGGAATTGATAACG
CCAAACGGCAAAGAGAATTAGCAGCTCTAGAATCTCAGGTTGAAAGATTT
ACGTGAAAAGCCTGGCGAAGAACAAGAAGTTTTGGTCGAATTTTCAGACG
AAGAAGGTTTCGGTAAATACCTGGACCTCCACGAAGCATACAACATGTAC
ATCAATCTCAAAGGAATCGAACACATTGATTATCTCACTTTCCTCATGTC
TTTTGACCGTTTGTTTGAAATCGCAAAAGAAAAGAAGAACCACGAATACA
AGAAATATTTGAACAAAGTGCTTGATTACTTGTATAGCTTTTTGCAGCGA
ACGAAACCTCTTTTGAACCTGGAGAGGGAACTGAAAGAAGCTGATGAGGA
CTTTCAAAGCAAATACGAACACGGAAATTTCATGGGTTGGCCCAAAGAAA
CTGGAAGTGCACTTGCTCACTCAGATAAATTGAAGAAGTACTACACTGAT
GACGACTCACTGAGACAAGAAGAAATCAACTCCATCGCTGGTCCTAATGA
ATTTGCAGAATTTTATGGTCGTTTGAGGACCATCAAACAATATCACCGCA
AATACCCAAACGAAGTTGCTGAACCCATGCAAATGGAGTTCCTCAGATGG
AGACCGTCATTGAGCAACAACGAAGATGCCACGAAGAGAGAGAACGACTG
GAAGGCGGTATGACACAAGAATTGTTATTGAAAAAGAACAATTTGAAAGA
ACAAATCAATTCGGATCATCGGGTTCACTTTCTGTTGGATCGATATATGG
AAGTCACTGGCTGGGACGGGAAACCAATACCCTACTGGCTTTACAAATTA
CACGGCTTGAATCTCTATTACCCATGCGAAATTTGTGGCAATCAGAAATA
CAGAGGTCCAAAAGCTTTCCAAAGACATTTCTCAGAGTGGCGCCATGCGC
ATGGTATGCGTGTTTTGAACATACCTAACACAGCGCATTTCGCAAACGTC
ACAAAGATCGAAGACGCCCTTTCTCTTTGGGAGAAATTGAAAGAAGAGAA
AGCTAAAGAGAGGTTCCAACCTGACGCGGACGAAGAATTCGAAGATTCTG
TGGGAAATGTCGTTAATAAGAAAACTTTCGAAGATCTCTCTCGACAGGGA
TTACTTTAAGTGTACCGGCTAGTTGAGTTGGTTGGCGAAGAACGGCAAGC
GACGCGCGAGAACGTTGAACGGAAACAAGCGCGTACGGCGAACGAACTAG
AAGATGACGAAGAAGAAAATGCATTGGATGAAGAAAGTGACGATGAAGAA
GAACAAACGCTTTACAATCCAAAGAAACTCCCTCTCGGTGCACATTTGGA
CCTTTCGGCTTTTTCCTCACCCGAAGAGTTGATGTCTCTTGGTTTGGATC
GATTGAAATCAGCCTTACAGGCGTTGAGTATGAAATGTGGCGGAACATTA
GAAGAAAGAGCAAAAAGACTATTTGGCACTAAAGGTGTCAGCCTGGAAGA
TTTAAAGTCGACACAGGGCGGAAAGAAAGGGCGTGGTAAAAGTAAAGGAA
TTGATAACGCCAAACGGCAAAGAGAATTAGCAGCTCTAGAATCTCAGGTT
GAAAGATTTACGTGAAAAGCCTGGCGAAGAACAAGAAGTTTTGGTCGAAT
TTTCAGACGAAGAAGGTTTCGGTAAATACCTGGACCTCCACGAAGCATAC
AACATGTACATCAATCTCAAAGGAATCGAACACATTGATTATCTCACTTT
CCTCATGTCTTTTGACCGTTTGTTTGAAATCGCAAAAGAAAAGAAGAACC
ACGAATACAAGAAATATTTGAACAAAGTGCTTGATTACTTGTATAGCTTT
TTGCAGCGAACGAAACCTCTTTTGAACCTGGAGAGGGAACTGAAAGAAGC
TGATGAGGACTTTCAAAGCAAATACGAACACGGAAATTTCATGGGTTGGC
CCAAAGAAACTGGAAGTGCACTTGCTCACTCAGATAAATTGAAGAAGTAC
TACACTGATGACGACTCACTGAGACAAGAAGAAATCAACTCCATCGCTGG
TCCTAATGAATTTGCAGAATTTTATGGTCGTTTGAGGACCATCAAACAAT
ATCACCGCAAATACCCAAACGAAGTTGCTGAACCCATGCAAATGGAGTTC
CTCAGATGGAGACCGTCATTGAGCAACAACGAAGATGCCACGAAGAGAGA
GAACGACTGGAAGGCGGTATGACACAAGAATTGTTATTGAAAAAGAACAA
TTTGAAAGAACAAATCAATTCGGATCATCGGGTTCACTTTCTGTTGGATC
GATATATGGAAGTCACTGGCTGGGACGGGAAACCAATACCCTACTGGCTT
TACAAATTACACGGCTTGAATCTCTATTACCCATGCGAAATTTGTGGCAA
TCAGAAATACAGAGGTCCAAAAGCTTTCCAAAGACATTTCTCAGAGTGGC
GCCATGCGCATGGTATGCGTGTTTTGAACATACCTAACACAGCGCATTTC
GCAAACGTCACAAAGATCGAAGACGCCCTTTCTCTTTGGGAGAAATTGAA
AGAAGAGAAAGCTAAAGAGAGGTTCCAACCTGACGCGGACGAAGAATTCG
AAGATTCTGTGGGAAATGTCGTTAATAAGAAAACTTTCGAAGATCTCTCT
CGACAGGGATTACTTTAAGTGTACCGGCTAGTTGAGTTGGTTGGCGAAGA
ACGGCAAGCGACGCGCGAGAACGTTGAACGGAAACAAGCGCGTACGGCGA
ACGAACTAGAAGATGACGAAGAAGAAAATGCATTGGATGAAGAAAGTGAC
GATGAAGAAGAACAAACGCTTTACAATCCAAAGAAACTCCCTCTCGGTGC
ACATTTGGACCTTTCGGCTTTTTCCTCACCCGAAGAGTTGATGTCTCTTG
GTTTGGATCGATTGAAATCAGCCTTACAGGCGTTGAGTATGAAATGTGGC
GGAACATTAGAAGAAAGAGCAAAAAGACTATTTGGCACTAAAGGTGTCAG
CCTGGAAGATTTAAAGTCGACACAGGGCGGAAAGAAAGGGCGTGGTAAAA
GTAAAGGAATTGATAACGCCAAACGGCAAAGAGAATTAGCAGCTCTAGAA
TCTCAGGTTGAAAGATTTACGTGAAAAGCCTGGCGAAGAACAAGAAGTTT
TGGTCGAATTTTCAGACGAAGAAGGTTTCGGTAAATACCTGGACCTCCAC
GAAGCATACAACATGTACATCAATCTCAAAGGAATCGAACACATTGATTA
TCTCACTTTCCTCATGTCTTTTGACCGTTTGTTTGAAATCGCAAAAGAAA
AGAAGAACCACGAATACAAGAAATATTTGAACAAAGTGCTTGATTACTTG
TATAGCTTTTTGCAGCGAACGAAACCTCTTTTGAACCTGGAGAGGGAACT
GAAAGAAGCTGATGAGGACTTTCAAAGCAAATACGAACACGGAAATTTCA
TGGGTTGGCCCAAAGAAACTGGAAGTGCACTTGCTCACTCAGATAAATTG
AAGAAGTACTACACTGATGACGACTCACTGAGACAAGAAGAAATCAACTC
CATCGCTGGTCCTAATGAATTTGCAGAATTTTATGGTCGTTTGAGGACCA
TCAAACAATATCACCGCAAATACCCAAACGAAGTTGCTGAACCCATGCAA
ATGGAGTTCCTCAGATGGAGACCGTCATTGAGCAACAACGAAGATGCCAC
GAAGAGAGAGAACGACTGGAAGGCGGTATGACACAAGAATTGTTATTGAA
AAAGAACAATTTGAAAGAACAAATCAATTCGGATCATCGGGTTCACTTTC
TGTTGGATCGATATATGGAAGTCACTGGCTGGGACGGGAAACCAATACCC
TACTGGCTTTACAAATTACACGGCTTGAATCTCTATTACCCATGCGAAAT
TTGTGGCAATCAGAAATACAGAGGTCCAAAAGCTTTCCAAAGACATTTCT
CAGAGTGGCGCCATGCGCATGGTATGCGTGTTTTGAACATACCTAACACA
GCGCATTTCGCAAACGTCACAAAGATCGAAGACGCCCTTTCTCTTTGGGA
GAAATTGAAAGAAGAGAAAGCTAAAGAGAGGTTCCAACCTGACGCGGACG
AAGAATTCGAAGATTCTGTGGGAAATGTCGTTAATAAGAAAACTTTCGAA
GATCTCTCTCGACAGGGATTACTTTAAGTGTACCGGCTAGTTGAGTTGGT
TGGCGAAGAACGGCAAGCGACGCGCGAGAACGTTGAACGGAAACAAGCGC
GTACGGCGAACGAACTAGAAGATGACGAAGAAGAAAATGCATTGGATGAA
GAAAGTGACGATGAAGAAGAACAAACGCTTTACAATCCAAAGAAACTCCC
TCTCGGTGCACATTTGGACCTTTCGGCTTTTTCCTCACCCGAAGAGTTGA
TGTCTCTTGGTTTGGATCGATTGAAATCAGCCTTACAGGCGTTGAGTATG
AAATGTGGCGGAACATTAGAAGAAAGAGCAAAAAGACTATTTGGCACTAA
AGGTGTCAGCCTGGAAGATTTAAAGTCGACACAGGGCGGAAAGAAAGGGC
GTGGTAAAAGTAAAGGAATTGATAACGCCAAACGGCAAAGAGAATTAGCA
GCTCTAGAATCTCAGGTTGAAAGATTTACGTGAAAAGCCTGGCGAAGAAC
AAGAAGTTTTGGTCGAATTTTCAGACGAAGAAGGTTTCGGTAAATACCTG
GACCTCCACGAAGCATACAACATGTACATCAATCTCAAAGGAATCGAACA
CATTGATTATCTCACTTTCCTCATGTCTTTTGACCGTTTGTTTGAAATCG
CAAAAGAAAAGAAGAACCACGAATACAAGAAATATTTGAACAAAGTGCTT
GATTACTTGTATAGCTTTTTGCAGCGAACGAAACCTCTTTTGAACCTGGA
GAGGGAACTGAAAGAAGCTGATGAGGACTTTCAAAGCAAATACGAACACG
GAAATTTCATGGGTTGGCCCAAAGAAACTGGAAGTGCACTTGCTCACTCA
GATAAATTGAAGAAGTACTACACTGATGACGACTCACTGAGACAAGAAGA
AATCAACTCCATCGCTGGTCCTAATGAATTTGCAGAATTTTATGGTCGTT
TGAGGACCATCAAACAATATCACCGCAAATACCCAAACGAAGTTGCTGAA
CCCATGCAAATGGAGTTCCTCAGATGGAGACCGTCATTGAGCAACAACGA
AGATGCCACGAAGAGAGAGAACGACTGGAAGGCGGTATGACACAAGAATT
GTTATTGAAAAAGAACAATTTGAAAGAACAAATCAATTCGGATCATCGGG
TTCACTTTCTGTTGGATCGATATATGGAAGTCACTGGCTGGGACGGGAAA
CCAATACCCTACTGGCTTTACAAATTACACGGCTTGAATCTCTATTACCC
ATGCGAAATTTGTGGCAATCAGAAATACAGAGGTCCAAAAGCTTTCCAAA
GACATTTCTCAGAGTGGCGCCATGCGCATGGTATGCGTGTTTTGAACATA
CCTAACACAGCGCATTTCGCAAACGTCACAAAGATCGAAGACGCCCTTTC
TCTTTGGGAGAAATTGAAAGAAGAGAAAGCTAAAGAGAGGTTCCAACCTG
ACGCGGACGAAGAATTCGAAGATTCTGTGGGAAATGTCGTTAATAAGAAA
ACTTTCGAAGATCTCTCTCGACAGGGATTACTTTAAGTGTACCGGCTAGT
TGAGTTGGTTGGCGAAGAACGGCAAGCGACGCGCGAGAACGTTGAACGGA
AACAAGCGCGTACGGCGAACGAACTAGAAGATGACGAAGAAGAAAATGCA
TTGGATGAAGAAAGTGACGATGAAGAAGAACAAACGCTTTACAATCCAAA
GAAACTCCCTCTCGGTGCACATTTGGACCTTTCGGCTTTTTCCTCACCCG
AAGAGTTGATGTCTCTTGGTTTGGATCGATTGAAATCAGCCTTACAGGCG
TTGAGTATGAAATGTGGCGGAACATTAGAAGAAAGAGCAAAAAGACTATT
TGGCACTAAAGGTGTCAGCCTGGAAGATTTAAAGTCGACACAGGGCGGAA
AGAAAGGGCGTGGTAAAAGTAAAGGAATTGATAACGCCAAACGGCAAAGA
GAATTAGCAGCTCTAGAATCTCAGGTTGAAAGATTTACGTGAAAAGCCTG
GCGAAGAACAAGAAGTTTTGGTCGAATTTTCAGACGAAGAAGGTTTCGGT
AAATACCTGGACCTCCACGAAGCATACAACATGTACATCAATCTCAAAGG
AATCGAACACATTGATTATCTCACTTTCCTCATGTCTTTTGACCGTTTGT
TTGAAATCGCAAAAGAAAAGAAGAACCACGAATACAAGAAATATTTGAAC
AAAGTGCTTGATTACTTGTATAGCTTTTTGCAGCGAACGAAACCTCTTTT
GAACCTGGAGAGGGAACTGAAAGAAGCTGATGAGGACTTTCAAAGCAAAT
ACGAACACGGAAATTTCATGGGTTGGCCCAAAGAAACTGGAAGTGCACTT
GCTCACTCAGATAAATTGAAGAAGTACTACACTGATGACGACTCACTGAG
ACAAGAAGAAATCAACTCCATCGCTGGTCCTAATGAATTTGCAGAATTTT
ATGGTCGTTTGAGGACCATCAAACAATATCACCGCAAATACCCAAACGAA
GTTGCTGAACCCATGCAAATGGAGTTCCTCAGATGGAGACCGTCATTGAG
CAACAACGAAGATGCCACGAAGAGAGAGAACGACTGGAAGGCGGTATGAC
ACAAGAATTGTTATTGAAAAAGAACAATTTGAAAGAACAAATCAATTCGG
ATCATCGGGTTCACTTTCTGTTGGATCGATATATGGAAGTCACTGGCTGG
GACGGGAAACCAATACCCTACTGGCTTTACAAATTACACGGCTTGAATCT
CTATTACCCATGCGAAATTTGTGGCAATCAGAAATACAGAGGTCCAAAAG
CTTTCCAAAGACATTTCTCAGAGTGGCGCCATGCGCATGGTATGCGTGTT
TTGAACATACCTAACACAGCGCATTTCGCAAACGTCACAAAGATCGAAGA
CGCCCTTTCTCTTTGGGAGAAATTGAAAGAAGAGAAAGCTAAAGAGAGGT
TCCAACCTGACGCGGACGAAGAATTCGAAGATTCTGTGGGAAATGTCGTT
AATAAGAAAACTTTCGAAGATCTCTCTCGACAGGGATTACTTTAAGTGTA
CCGGCTAGTTGAGTTGGTTGGCGAAGAACGGCAAGCGACGCGCGAGAACG
TTGAACGGAAACAAGCGCGTACGGCGAACGAACTAGAAGATGACGAAGAA
GAAAATGCATTGGATGAAGAAAGTGACGATGAAGAAGAACAAACGCTTTA
CAATCCAAAGAAACTCCCTCTCGGTGCACATTTGGACCTTTCGGCTTTTT
CCTCACCCGAAGAGTTGATGTCTCTTGGTTTGGATCGATTGAAATCAGCC
TTACAGGCGTTGAGTATGAAATGTGGCGGAACATTAGAAGAAAGAGCAAA
AAGACTATTTGGCACTAAAGGTGTCAGCCTGGAAGATTTAAAGTCGACAC
AGGGCGGAAAGAAAGGGCGTGGTAAAAGTAAAGGAATTGATAACGCCAAA
CGGCAAAGAGAATTAGCAGCTCTAGAATCTCAGGTTGAAAGATTTACGTG
AAAAGCCTGGCGAAGAACAAGAAGTTTTGGTCGAATTTTCAGACGAAGAA
GGTTTCGGTAAATACCTGGACCTCCACGAAGCATACAACATGTACATCAA
TCTCAAAGGAATCGAACACATTGATTATCTCACTTTCCTCATGTCTTTTG
ACCGTTTGTTTGAAATCGCAAAAGAAAAGAAGAACCACGAATACAAGAAA
TATTTGAACAAAGTGCTTGATTACTTGTATAGCTTTTTGCAGCGAACGAA
ACCTCTTTTGAACCTGGAGAGGGAACTGAAAGAAGCTGATGAGGACTTTC
AAAGCAAATACGAACACGGAAATTTCATGGGTTGGCCCAAAGAAACTGGA
AGTGCACTTGCTCACTCAGATAAATTGAAGAAGTACTACACTGATGACGA
CTCACTGAGACAAGAAGAAATCAACTCCATCGCTGGTCCTAATGAATTTG
CAGAATTTTATGGTCGTTTGAGGACCATCAAACAATATCACCGCAAATAC
CCAAACGAAGTTGCTGAACCCATGCAAATGGAGTTCCTCAGATGGAGACC
GTCATTGAGCAACAACGAAGATGCCACGAAGAGAGAGAACGACTGGAAGG
CGGTATGACACAAGAATTGTTATTGAAAAAGAACAATTTGAAAGAACAAA
TCAATTCGGATCATCGGGTTCACTTTCTGTTGGATCGATATATGGAAGTC
ACTG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_005380	XLOC_005380	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00009644-protein	TCONS_00009644-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000097	supercontig	sc0000097:616802..624108 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.7794	28.5493	18.4263	15.507	22.3378	21.4855	18.9415	20.3782	19.781	21.1858	17.7161	15.1979	14.3492	16.9222	15.415	16.3058	21.3033	18.2196	11.0083	11.1293	14.2212	14.2437	22.0353	23.7488	23.3603	23.4222	9.87293	10.0844	13.6797	14.4006

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR021966	SF3a60_bindingd
IPR031774	SF3A3_dom
IPR024598	DUF3449

Blast

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BLAST of TCONS_00009644 vs. Swiss-Prot (Human)
Match: SF3A3 (Splicing factor 3A subunit 3 OS=Homo sapiens GN=SF3A3 PE=1 SV=1)

HSP 1 Score: 561.222 bits (1445), Expect = 0.000e+0
Identity = 316/502 (62.95%), Postives = 389/502 (77.49%), Query Frame = 2

Query: 3608 METVIXXXXXXXXXXXXXXGGMTQEXXXXXXXXXEQINSDHRVHFLLDRYMEVXXXXXXXXXXXXSLRQEEINSIAGPNEFAEFYGRLRTIKQYHRKYPNEVAEPMQMEFLRLKDLREKPGEEQEVLVEFSDEEGFGKYLDLHEAYNMYINLKGIEHIDYLTFLMSFDRLFEIAKEKKNHEYKKYLNKVLDYLYSFLQRTKPLLNLERELKEADEDFQSKYEHGNFMGWPKETGSALAHSGAHLDLSAFSSPEELMSLGLDRLKSALQALSMKCGGTLEERAKRLFGTKGVSLEDLXXXXXXXXXXXXXXXIDNAKRQRELAALESQVYRLVELVGEERQATRENVERKQARTXXXXXXXXXXXXXXXXXXXXXXQTLYNPKKLPLGWDGKPIPYWLYKLHGLNLYYPCEICGNQKYRGPKAFQRHFSEWRHAHGMRVLNIPNTAHFANVTKIEDALSLWXXXXXXXXXXRFQPDADEEFEDSVGNVVNKKTFEDLSRQGLL 5113
            MET++EQQRR HEE+ERL   M +E+L KK+ L++QINSDHR   + DRYMEV+  L+  Y D D LR+EE+N+I+GPNEFAEFY RL+ IK++HRK+PNE+  PM +EF  L   RE P EE + LVEF+DEEG+G+YLDLH+ Y  YINLK  E +DY+T+L  FD+LF+I KE+KN EYK+YL  +L+YL  +  R KPL +      +   +F+ K+E+G F GWPKET SAL H+GAHLDLSAFSS EEL SLGLDRLKSAL AL +KCGGTLEERA+RLF TKG SLE L ++   K  + K    D  +R +++A LE+Q+Y  VE++GE+R  T ENV+RKQART  E E++EEE   + ES+DEE + +YNPK LPLGWDGKPIPYWLYKLHGLN+ Y CEICGN  YRGPKAFQRHF+EWRHAHGMR L IPNTAHFANVT+IEDA+SLW KLK +KA ER+QPD +EE+EDS GNVVNKKT+EDL RQGLL
Sbjct:    1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKERKNAEYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQAEFEKKWENGTFPGWPKETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTKRD-TERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501

The following BLAST results are available for this feature:

BLAST of TCONS_00009644 vs. Swiss-Prot (Human)

BLAST of TCONS_00009644 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SF3A3	0.000e+0	62.95	Splicing factor 3A subunit 3 OS=Homo sapiens GN=SF...	[more]

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TCONS_00009644 (transcript) - C. hemisphaerica