TCONS_00009455 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009455
Unique NameTCONS_00009455
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1903

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009455 ID=TCONS_00009455|Name=TCONS_00009455|organism=Clytia hemisphaerica|type=transcript|length=1903bp
TTTAGAAGTACTATAACATCTTTGTAAGCAAAgtaacaataacaaacaaa
tgTATGCAACAAAACTTTGAATAACCTTGGttgtaaaaatatattttctt
ggCCTGCCTGTTAAAAACGAGCTTGATCAAAATGGTTTGTGAGCTTTTGA
TAACGATTCCGGAAGACGCAAATTCATTGCTCAAGCCTGGATACATTCAA
CGGTTAAGAGgACACATCTCGATGACGCATCCAAACCAAGAAAACGATAA
CCCAAAAACCATTCCACAACCCAATTCGGAATTATCGGATACGAATAACA
AAAAGAATCTACCCATGGCTGTCGATAGCGTCGAGCAACACGTGAAACCA
TGCAACTGTGGACAAACGACCCCAGAAAAACAACAAGTCAAGTCTTCATC
TAAAATATCAATGAGTTACGCCAAATTAAAACGAGACCGTCggaaatcga
aatcgaaaaacCGTAAAAATTTAGATCGTAAAAATCGGCAGTTATTAGCG
AAAGTTGAAGATGCATCGACGTTACCAGCTGAGCAAGGCTCTTGGTTATT
AAGACTTTTTGAATCAAAATTATTCGACATGCCTATCGCTATTTCATATA
TGTTCAATTCAAAGGAATGTGGTGTTTTGGCGTACCTAGGCAATAAATTA
TTCAGTTTCACAGACCAAGAAGTAGACGTTTATTTACCGGAATTAATACA
CATGTACCTACACATGGAAGAAGTAGCGGATTACATTTTCCCATACCTAT
CATTACGCGCCAAAAATCACACCATATTCAGTCTGCGTTCCTCATGGATC
CTTGACTCTGAACTCAATCTGGGTGAATTGGAACCGGAAGAAATTAAACG
TGGAAAGAAATTAAGACAAGTTATTACGGAGGAACAAACTAAAGTGCACA
GACCAAAGCTTATAACAACACAACAAACACCTGCTTCAAAGAAATCACAC
AAACGGTCCAAATCGGAAGCTCTTATCGGAACGATCACCGATCGGGCGTC
ATTCCACAATCCTTTACCCGTCACACACAGTCAATCGACTGATAACATCG
GTCaagaaaacttcaaaatggGTCTCGCGTTTGGTAAATGTCCGCAACAT
CTTCTATCCGGTGGTGTCCGTTTAGACCCGGCCGTTGCAATGCAGAAGGC
ATCTTCATCGAACGATCTCAAAGACTTAGCGACAGATACTACCGAGGAAG
ACTTGAGTCAATGTTGTTGTTGGCAGGTCCCATTATACGTGGCCGAGCAA
GAATTCGTAAAAGCTCTCATGGATATCGGTCAACGAATGAAAGGTCTTCA
AACGAAACAACAGAAAGTACAACGTCTTTGTGCGGAACTGTCTCTTCTCA
ACTTGAACTTACCTGCCAAAGTATTTGTTCCTTTCGACGACATGTTCCCC
CATCATGTGGTCCGTATACCTCATAACGCGGCCGTCGTTCTTAACTCCAA
AGAAAAGGCACCATATATCATCTACATTGAAGTGTTAGCTCATGACGTTG
AAGAAGACCTCGAACTTCAAGAACAATACCACGAAAACTTACTAGCTGAC
CACTATCGAAGCATGAACGGGAATGATGACACAGTATTGAGTACACCGTT
CGACCGGACGAAATTCGAGGACGGTTTAGGATCGTTTGATTGTGGTTATT
CACCGGAGAGTAGTGAATACGATGGAACGTTGTCGGTTGGCGATGACATT
AGTGAAACGACGACGGGGAGCAGTGAAATTCCTTCCGAAGAAAtcgaaga
aaatgaagaaggagAGGAAAAGGAAATGTACATTTCTGCTATCGATGTTC
GGATGCGACTCAAAGATTCGGTATCAACGCCGAAAGCACAATTCATGGTC
CGTGATCCTGATGATCCGTCAGCTGCTGCATTGAAAGAGCCGTGGACGGA
AAN
Run BLAST on NCBI

transcript from alignment at sc0000095:139054..146951+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009455 ID=TCONS_00009455|Name=TCONS_00009455|organism=Clytia hemisphaerica|type=transcript|length=7898bp|location=Sequence derived from alignment at sc0000095:139054..146951+ (Clytia hemisphaerica)
TTTAGAAGTACTATAACATCTTTGTAAGCAAAgtaacaataacaaacaaa
tgTATGCAACAAAACTTTGAATAACCTTGGttgtaaaaatatattttctt
ggCCTGCCTGTTAAAAACGAGCTTGATCAAAATGGTTTGTGAGCTTTTGA
TAACGATTCCGGAAGACGCAAATTCATTGCTCAAGCCTGGATACATTCAA
CGGTTAAGAGGTAACACAGTCTAAATTTTACTTCAATATTTTGCTTACTG
TACATAAGCTTCACGAACTGGACTATTTTTGGGTTCGCATTATTATTTCT
GTATGGAATAGGTGTGTGGGGGGGGGTGCCAGCTTCAAGTTTTAAATGTC
GGTAAACATTGTCATTTACTGATTTCATGGGCCTTACATTACGTCCTTAG
AATTATACAGTATGTCATGACTTTGATATGTGTTTCAGTACGACAATGTA
ACGGTATAAAACCGCTTACTTTTGTATGCGTGACTATAGTTCGATTCATT
gataatttgttttaaatgttgcCAAACTCGTGAGTTGGCTTTACCTCAAA
AAACCAGGTATTTCGAAATCCACCATCCCATGTTCTAATGATTTTACCAC
TAGTTTTCCTTCCTTAATTTCTGGTATTTAATCTTATCATGTAAATCTTT
TAATACCAATTGAAGCGTTTATCGTTTAAAGAATTcccctttttttatca
aaaaatggcATCAAAGTCGACAACATTAATCAGTGTTTTCACTTTGTTAG
CTAAGATTTATGTCACCGATCGATGGCTCAAAGTATTCCTATTCATGGAC
TATTCAAATGAATTTTGATATCTTTGATCTGACTTGGTAATAGTTTTCCC
ATATATTTATATTCCCATAAtatattttcctcatttttgacAGTAGTACC
CTGCAGTTTAAAACATCATCTGTCAAAGTTAATCTTTGGACTTTGTCATA
TCTTTTCCTACCATATAGCTAAATTGTTTTTATAGTGATTTTACTCCTAG
TTTTAAAAGATTTCACTCTAACTTTAAAAGGATTTCAACAATTGACTTAA
TTTAGAATAGTACTAATGAATTCGATTTTAGAGTTCAATAGTATATATAG
AGTTCAATCAATTGCAGAGATAGAAATAAAAACGCGAGTGTTTCAGCATT
CGATCCACAGAAATTGCATATTTAAAAAGGACgaatattttagagaaaaa
agttttcataaCAGTCTCAAATCTGCGACAACAACGAGACTACAAGCTTT
AATATTTTGTAATGGCTTGTCTACACTAAGTAGCCCATTTTTatcatgaa
atcaaaattatatcatcatttgaaaacttaacgaAAATTAGAAAGTAAAA
CTGTGGAGGAATGATTGACAGGATGAGCCAGTACCTGATCTATCTGCTGA
TTTTGTTGATGAAAAATCGACTAGACTGGCTGTGTGGAGATTCCCCTTTT
CGTATTCCTATCTTTTAATCGATGAGCAAATATCGGAAAAACTCGATACA
TTAAcaaatatgaaaattaaaaccaaagtaaactgaaagaaaaaatatgg
TTTCAATAATCAAATACTGTTAGCCTCTGTTACAAGACTTTTTGaggttt
ttctttaaagttaGCTCCAAACAGGCAACAATTCTTAGTTGTTGTTATAA
TTATATATGTACCCCCTATATAGAACAGAATAATACAGTCTATGCTGCTA
ATGAAACATTCATTTTTGTCACCGTGCGGATCTAAGGGAGATTCAAAGTT
TATGACGGAGTAATCTTTCCACCACGATTCTCTGTAATAAATTTTGTTAT
CCCTCCCCATCTCTCAGATCCGCTTCTGCCTTGTAAGAGCATATACCGAC
TTCCACTTTTAAACAGAAATAAGGTCCTGTCTTGTGCTGTCTTCgttata
ttcaattcaaaaaaacgttttggaGTAAAAAGACACAATTACGACGAACG
AATTCCAGTTTACTGCTGTGTCAATGATTCATTTTGTCACTttgacattt
ttatgacgtcactgtcaacaaaaataataatgataatgacTAGAAGAAGG
GACTTTGAACTAACTTGATATCTACGCTTTTTGCGGCCTGTCAACGATAA
TATGAAGAAAAAAGGTATTTATCAAAAAGGTCTCGAaatgtattttgttt
tgaaatctaaTACCCTATGCTGCCAAAGCTTGATGTTGTCAAAACAACAT
ATCATtatttagaaacttttgttttttgatattGATTAGACCTTTTTTAC
CTAAATGTTGCAATATTTTATTGTAATATCCTTTAGTATCATATTTGTAT
TAAGAAACTAGGACAGCAGCTTTCATAGAGGTTTTTCTTCTTAGCTTAAA
GATGGCCAACTTAactgttttctaatttttatatttcaattttattggtA
TAATATCGTGGTGAAATTGAAATTACTATgatgtttttatatatattaaa
gatgaaaaataagttttaatCTACTAGGTTATCTTTGACCATTTATATAC
AGATTTATAAGTATGAAGTTCTAATGAAGCTCTGTTGGAATGTAGCTGTA
TTTAAACTAAGGattgtttcttattttttttctaggACACATCTCGATGA
CGCATCCAAACCAAGAAAACGATAACCCAAAAACCATTCCACAACCCAAT
TCGGAATTATCGGATACGAATAACAAAAAGAATCTACCCATGGCTGTCGA
TAGCGTCGAGCAACACGTGAAACCATGCAACTGTGGACAAACGACCCCAG
AAAAACAACAAGTCAAGTCTTCATCTAAAATATCAATGAGTTACGCCAAA
TTAAAACGAGACCGTCggaaatcgaaatcgaaaaacCGTAAAAATTTAGA
TCGTAAAAATCGGCAGTTATTAGCGAAAGTTGAAGATGCATCGACGTTAC
CAGCTGAGCAAGGCTCTTGGTTATTAAGACTTTTTGAATCAAAATTATTC
GACATGCCTATCGCTATTTCATATATGTTCAATTCAAAGGAATGTGGTGT
TTTGGCGTACCTAGGCAATAAATTATTCGTGAGTATCCAATCTCTTTGCT
GAGCGGGGCTCGATAATCAATGAAAACTTAATGAAATAGGCTTCTAATCT
TGATCAGTGTTGAATATGGAACTAAGCCGAGATCttaaaaccttttttca
aatattttgaaccCATACGCCTGGATTGGCTCATGCTGCAGAAAATTATT
GAGGTCTTGAATACCATTTATAGAGAAATAAAAGTCCTCAacttctcaac
ttgttcttaacattttggccatcaagccttattttcttatatagtttgtt
cttataaaacaaattttcccCTTTACATTCTCTCCACAGAGTTTCACAGA
CCAAGAAGTAGACGTTTATTTACCGGAATTAATGTAAGTTATCTGTTTTA
TATTCATGACATAATCCTTTATCAAGAACCACTTTAGAAAAACCTGGATT
CTCCAACAATTTTGTGCATTCAACTTGTATGCCAAACTTCCACGTTTGAC
CCTTTTAGGTGTTTCCGTTAAAAAGGTTACGTCATTCATATTTCAGGCAA
AATGCTTTATTATCAGTTTCCTTCAGAAAATCTCGAAGCAAGCAAGGCAT
CACTCATCTGCAATTAGAATCGAATTTTTTTCCTGATCAGTTTTGTCCtt
gtttggaaaaaaggctacaTTGCAATTATATCTTTTTCGATAATTACTTT
CTTTGCAAACATTAAATACTAAGGAAAACCTCAAAATGTTTCTAAGCTAC
TTCTTTTGTTATTAATAAGTGTATAACATAATCATAGAAACGGTAGCCAA
TGAACTTTGCATTTTTGACATTGTAAGTGCATGACAATATTCTCTCAACA
GTATTACATAGTCTCAACAATTAAGCTTTAACATTCCATTGCTATGAACT
TTGGTACCAAAAATAACTCAAATTGTTCTTAGAGATTATTAAATTGGCTA
TAAAATTCTTTACAACAGCCTATCGATTACTTGATTTGCATACCAATGAT
TGTTGAGTTCAATTCCAAAGTGCCTCAAATCAAttttatcgatcttttat
cATCACGATAATCATTGCATTCGATTATCTTACATTCCATACAAGCCTTT
CCCATAGGTTCCAATTAAttcagattttgttgatttaAAGCACGATAAGA
CTTCGATCCATAAATTCAGAATACGGAAAATTTAAAACCCCAAcggaata
aaaaacttttttcgacATTTCACCCTGTTTCCATGCCTTCAACGCGACTT
ATTAACACCAATAATTATATGTGGCTCCCCATTTATACCGTTAAATAATT
TAGCGCCCCGAATCCCTGCTTACAATCTTTTCACAATTATTTGCCTCACA
AGAAAAACTTGTACAATCGTCCCTCTAATTCGATCCTTAAGGGACACGAA
AGATTCTTTTTGAATTGTAGAAAGATTCGGATAACGGAGAGTATTTTAAA
CGAAATTCCAGCTAAAAAGATCAATGATTTAGTTCgagttacagaaagat
tcgaaatgATATGGgtttgaattacagagagttGACTAATCTTCATTAGT
TGTAAAAAACAAAGAACGATACCTGTGATATCTCTTTCACTTCGATGTGA
ATCTAGGACtataatctaggacttttagacagtctttcgattgttttcac
ggggtccataGTCaaccggctcggctatctatgagcTAAACGGAGCATGG
GAATAAGTAGAAATTTAGAAGAAATTTGTAGGGTCAAAGTCTTAGACCAC
TGGACTATCGCTCATTCATTGATTTAACCATTGCTCACGTTTAGACACAT
GTACCTACACATGGAAGAAGTAGCGGATTACATTTTCCCATACCTATCAT
TACGCGCCAAAAATCACACCATATTCAGTCTGCGTTCCTCATGGATCCTT
GACTCTGAACTCAATCTGGGTGAATTGGAACCGGAAGAAATTAAACGTGG
AAAGAAATTAAGACAAGTTATTACGGAGGAACAAACTAAAGTGCACAGGT
ATGAATTGATATTCGACTCTACCTATTTGAATTGCCTGTCCTTTTGAAGA
AAAGCTACTCGTCCGACAGCTGGGTATATTTCTCCGAAACCAAAATAATA
TTAGTTGCACGGTTTTCTCGAGGTGgcatacgggatatacagggtcagta
aataccgtattggtggcgaggcttAACGAGTCCTTGCAAAACAGCGCCAT
ATAAAGGGCTCTACAGCATTAAGTTACTATGCATAGTAGCTCATGTAATG
TCAAATGAAACCTTCATTTTAAACTCTGTCtttttcatttccattttcTT
TTAGACCAAAGCTTATAACAACACAACAAACACCTGCTTCAAAGAAATCA
CACAAACGGTCCAAATCGGAAGCTCTTATCGGAACGATCACCGATCGGGC
GTCATTCCACAATCCTTTACCCGTCACACACAGTCAATCGACTGATAACA
TCGGTCaagaaaacttcaaaatggGTCTCGCGTTTGGTAAATGTCCGCAA
CATCTTCTATCCGGTGGTGTCCGTTTAGACCCGGCCGTTGCAATGCAGAA
GGCATCTTCATCGAACGATCTCAAAGACTTAGCGACAGATACTACCGAGG
AAGACTTGAGTCAATGTTGTTGTTGGCAGGTCCCATTATACGTGGCCGAG
CAAGAATTCGTAAAAGCTCTCATGGATATCGGTCAACGAATGAAAGGTCT
TCAAACGAAACAACAGAAAGGTAtaatataaagaaaataaaagattCGTA
AAACAGTGAGGGATTCAACAGCTCTTCCTTACCATGAACGGATATAGAGA
TTCTTTCTTCGACAGAGGCATTGTCtggaattttttctttgaaaagccCG
ACTTACAATTCATAATTATCATTTTATGATCTAGTTCTATTCATCGAAAG
ACAATTTCTTCGCGAATCTGCGCATGGCGTTGCGTCCTAGCCGTCTGTAG
ACTACATCCACATCGATTAGATTTCTAATTCTTTGTAAGAAAAGATTTGT
TAATGTTGATTTCTCATTGGAAGGTCATTACAACACAGTTAGAAAAACCC
aaccaattttctaaaattatggtAGTTTTAACTTACTTTTACTTTCTTCC
TTCTTTAGTACAACGTCTTTGTGCGGAACTGTCTCTTCTCAACTTGAACT
TACCTGCCAAAGTATTTGTTCCTTTCGACGACATGTTCCCCCATCATGTG
GTCCGTATACCTCATAACGCGGCCGTCGTTCTTAACTCCAAAGAAAAGGT
AAACCATCCATTTTCCTTACGTGCTTTTTTTATTTGCACTTTTCGCTGCA
AACTTAAGCACAATTTTGCTTCTCTATTCACTACCGGGGTCGTGGAATGG
CTGTCAGGTTGGTAGGGTTAACAAGAatgtgtatttttcaaaataggtAT
AGCCGTGGGtattgaatgaaaatgatttacaaAAGATTATGAAATGAAAT
ATTACGATTCAAAAAGAAATAAGCAGGACATTTAATACGCCTGAAGtaag
ttttggccattttcatttCAACACCCTCACAGATTTAGTTTTCACATTTC
CGTTGGCATTTTCGCAGGCACCATATATCATCTACATTGAAGTGTTAGCT
CATGACGTTGAAGAAGACCTCGAACTTCAAGAACAATACCACGAAAACTT
ACTAGCTGACCACTATCGAAGCATGAACGGGAATGATGACACAGTATTGA
GTACACCGTTCGACCGGACGAAATTCGAGGACGGTTTAGGATCGTTTGAT
TGTGGTTATTCACCGGAGAGTAGTGAATACGATGGAACGTTGTCGGTAAG
TGAGAGATAAAGAGAATGGATATTTCACGTGGATAGCCAAGTGATTTACA
aattttagacagtctttttAATTGATTTCGATTCCTGGTGATTTTATTGT
GATTGTTTTAACGGGATCAGtggccagccggctcggctatctatgaactt
tACGGAACATTCGAAGGAGTGGGCTTTCAAACTGGGAACCCCTAGTTTCT
CCTGGGCCAGTGCTCCATACGTGAGAGAAATATTTAGCAATAACCATTCA
AATCTTCTTTGTCGAGAGGGCTCGAAGTAAAACTGTGTGAGGGACTTGAC
TAAGTAAGTTCTTTGCTACAGAGTTTATCACCGTTTATCACCGTAAAGGT
ACTTCTTTGATAATGACACTCCTTACCAGACTTCTCTCCCTTACTATTAT
AGGTTGGCGATGACATTAGTGAAACGACGACGGGGAGCAGTGAAATTCCT
TCCGAAGAAAtcgaagaaaatgaagaaggagAGGAAAAGGAAATGTACAT
TTCTGCTATCGATGTTCGGATGCGACTCAAAGATTCGGTATCAACGCCGA
AAGCACAATTCATGGTCCGTGATCCTGATGATCCGTCAGGTATGTTTGTt
gatgaagaatatttttgaaaactcaggAAAGCGAAAATGTCTCTTCTAAT
CTTTCTTTGGTCACAATCTAATTCTACTCTTACTTTTGTCTTACCCTTAC
CAAATTTACAAAAGTATGTTATAATCCTATAAACGTCAATTTCATGATAT
GCACACCGCTACAATGTCTtctacggacccaacagctgattgattgaaag
tgacgtattgactgattttacttcacttacaaccaataagctattgggtc
cgtggtgtgatgtcagaagacattgcaatggtgcatatcatgaataagga
gAGTGCGTTCAAGTTTATCAGGGTCATGGTGTTCTTAATTCTAAATGATC
CCGGCTTGAATTACGTCAAATCAAATATTTTCCATGCGGGAGCATCTATA
TAATAATTTCGCCTTCACTGCATTTAACCATGATAAACTTGAACAATTTG
ATTTTGTCTTCATTCAGCTGCTGCATTGAAAGAGCCGTGGACGGAAAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005297XLOC_005297Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009455-exon-sc0000095-1491911889:139054..139263TCONS_00009455-exon-sc0000095-1491911889:139054..139263Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1510915933:139054..139263TCONS_00009455-exon-sc0000095-1510915933:139054..139263Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1575043694:139054..139263TCONS_00009455-exon-sc0000095-1575043694:139054..139263Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1491911889:141639..142081TCONS_00009455-exon-sc0000095-1491911889:141639..142081Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1510915933:141639..142081TCONS_00009455-exon-sc0000095-1510915933:141639..142081Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1575043694:141639..142081TCONS_00009455-exon-sc0000095-1575043694:141639..142081Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1491911889:142393..142436TCONS_00009455-exon-sc0000095-1491911889:142393..142436Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1510915933:142393..142436TCONS_00009455-exon-sc0000095-1510915933:142393..142436Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1575043694:142393..142436TCONS_00009455-exon-sc0000095-1575043694:142393..142436Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1491911889:143848..144051TCONS_00009455-exon-sc0000095-1491911889:143848..144051Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1510915933:143848..144051TCONS_00009455-exon-sc0000095-1510915933:143848..144051Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1575043694:143848..144051TCONS_00009455-exon-sc0000095-1575043694:143848..144051Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1491911889:144358..144773TCONS_00009455-exon-sc0000095-1491911889:144358..144773Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1510915933:144358..144773TCONS_00009455-exon-sc0000095-1510915933:144358..144773Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1575043694:144358..144773TCONS_00009455-exon-sc0000095-1575043694:144358..144773Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1491911889:145162..145301TCONS_00009455-exon-sc0000095-1491911889:145162..145301Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1510915933:145162..145301TCONS_00009455-exon-sc0000095-1510915933:145162..145301Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1575043694:145162..145301TCONS_00009455-exon-sc0000095-1575043694:145162..145301Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1491911889:145621..145848TCONS_00009455-exon-sc0000095-1491911889:145621..145848Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1510915933:145621..145848TCONS_00009455-exon-sc0000095-1510915933:145621..145848Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1575043694:145621..145848TCONS_00009455-exon-sc0000095-1575043694:145621..145848Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1491911889:146256..146442TCONS_00009455-exon-sc0000095-1491911889:146256..146442Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1510915933:146256..146442TCONS_00009455-exon-sc0000095-1510915933:146256..146442Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1575043694:146256..146442TCONS_00009455-exon-sc0000095-1575043694:146256..146442Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1491911889:146921..146951TCONS_00009455-exon-sc0000095-1491911889:146921..146951Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1510915933:146921..146951TCONS_00009455-exon-sc0000095-1510915933:146921..146951Clytia hemisphaericaexon
TCONS_00009455-exon-sc0000095-1575043694:146921..146951TCONS_00009455-exon-sc0000095-1575043694:146921..146951Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:139054..146951 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.430537	0.00688133	0.303243	0.117758	70.5153	64.6268	50.9168	55.5744	9.54338	25.0537	26.2627	7.00572	22.9637	14.01	9.48237	16.8327	19.3296	16.5664	9.25678	10.5053	8.64255	6.55179	1.77244	8.16862	24.8664	20.7248	27.1305	15.506	23.9619	21.0106
Blast
[Close]
BLAST of TCONS_00009455 vs. Swiss-Prot (Human)
Match: PI4KB (Phosphatidylinositol 4-kinase beta OS=Homo sapiens GN=PI4KB PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 3.152e-62
Identity = 174/471 (36.94%), Postives = 255/471 (54.14%), Query Frame = 3 
Query:  540 SWLLRLFESKLFDMPIAISYMFNSKECGVLAYLGNKLFSFTDQEVDVYLPELIHMYLHM-EEVADYIFPYLSLRAKNHTIFSLRSSWILDSELNLGELEPEEIKRGKKLRQVITEEQTK-VHRPKLITTQQTPA-------SKKSHKRSKSEALIGTITDRASFHNPLPVTHSQSTDNIGQENFKMGLAFGKCPQHLLSGGVRLDPAVAMQKASSSNDLKDLATDTTEEDLSQCCCWQVPLYVA-EQEFVKALMDIGQRMKGLQTKQQKVQRLCAEXXXXXXXXPAKVFVPFDDMFPHHVVRIPHNAAVVLNSKEKAPYIIYIEVLAHDVEEDLELQEQYHENLLADHYRSMNGNDDTVLSTPFDRTKFEDGLGSFDC--GYSPESSEYD----GTLSVGDDXXXXXXXXXXXXXXXXXXXXXXXXXXMYISAIDVRMRLKDSVS-TPKAQFMVRDPDDPSAAALKEPWTE 1901
            SWLLRLFESKLFD+ +AISY++NSKE GV AY+GN+LF F +++VD YLP+L++MY+HM E+V D I PY+  R +    FSL+ + +L +  +   +  +   RG KLR++I  ++ K  HR + + +  +PA       SK++H+RSKS+A     T   S  + L  T S                               +P V        N+ ++L++ T   D S    +  P+ +A E+EF+K+LM IG+R+  L TK+QK QRL +ELSLLN  LPA+V++P    F HHVVR+PH  AVVLNSK+KAPY+IY+EVL  +  +   +  +  EN +    RS      +V + P      E   GSF     Y  +   +     G L V      T +  +           +  ++ ++I+A D+R RL + ++ TP A    RDP+DPSA ALKEPW E
Sbjct:  128 SWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFCFRNEDVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHRKRELPS-LSPAPDTGLSPSKRTHQRSKSDA-----TASISLSSNLKRTAS-------------------------------NPKV-------ENEDEELSSSTESIDNS----FSSPVRLAPEREFIKSLMAIGKRLATLPTKEQKTQRLISELSLLNHKLPARVWLPTAG-FDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECENFDTTSVPARIPENRI----RSTR----SVENLPECGITHEQRAGSFSTVPNYDNDDEAWSVDDIGELQVELPEVHTNSCDNISQFSVDSITSQESKEPVFIAAGDIRRRLSEQLAHTPTA--FKRDPEDPSAVALKEPWQE 539
The following BLAST results are available for this feature:
BLAST of TCONS_00009455 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PI4KB3.152e-6236.94Phosphatidylinositol 4-kinase beta OS=Homo sapiens... [more]
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