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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009207 ID=TCONS_00009207|Name=TCONS_00009207|organism=Clytia hemisphaerica|type=transcript|length=1329bp
ctccttatactacctggggttttgtagaggtctgcgattcagactaacgC
AACCACCGTTCAAAGTGCTTACCGGGCGAAGCAAAGGGGGTCGAGCAAGC
TTCCCGCCCTTTTACCGCCTTTGATCCTCTTGTCGTTTTGGGGGATGCTT
TTTAgtagtcactttcatttttgctTGCCAAGTCGAAAAACAGCACACCA
TTTTTCTGAAATTCTTACttttcatcacaaaattttGTAGTTATGAGACG
ATTTAAAGTTGTTTTGATAGGTGACAGTGATGTTGGTAAGTCATCTACTT
TCATTCGATTCAGGGATGGTAAATTTGATGATTATATTCAGTCAACAATT
GGTTTGGATTTTGCAACACGAGAAGTCAGTTTTCAAGTAAACGAGGATGA
TCCTGAGACAGAAACAAAAACTGAGaTTCAACTTTGGGATACAGCAGGAT
TGGAGAGAGCTGGTCGTATGACATCAAATTATTATAACTTCAGTCATGCT
GTTATCCTTATGTATGACGTCACAGATACAACAACAATGAACAACTTAGA
AATGTGGTATGACAATGCAAAAAACGATTCCAATAATACAAACACTATCT
ATTTTCTTGTTGGGAATAAAATTGACGAGACACCTGGTGAGATTCAGGTT
TCAGAAGGTGATGCATGTAGATTTGCTAAAGAAAGTTTGAAGATTGACTC
CGATAAATATGATGTTACATATCGCATCTCTGCTAAGACAGGAAATGGAT
TAAATGATCTGTTTCAGAAAATTACACACATCTTGTCGGGATGCTCTAAA
CAACCGGCTGAGAAGTTGGACAACACAATCACAGATTTAACAGATGCAGG
TAGAGAGAAAGACAAGTGCGGTTGCTAAAGCATCCAGGGATGGAAAAATG
TTATCCTGTTCattagaaatgaatgaaaaactGTAGAATTTAATTAAGTA
GAGTATTTCAATCTTTGtaatttaatatcttttaaggTAGATTAAAAACC
ATTCCATTCACCCATTTTGTTGAGCAAGAgtagaaattaaaattaagTGA
GATGCGATTTTATTCTAGAATGTAATTGTAGTGAAATTAATTCTTTGTTA
AACAGTAAATTTTTTACTTTCGgattttattattgattttATATCGATTT
TTGTATATTTGAGGCAATTTTAGGATTATATTTGTGTAATAGTTCAGATT
TTATATATGACTAAGAGataaatttatatattttttattatttcacaTCA
CAGCACCATCTTTcctaatattttttttacatattttttataaattaaaa
atacaaTTACATGGACCAGTGCCGAAAAT Run BLAST on NCBI protein sequence of TCONS_00009207-protein >TCONS_00009207-protein ID=TCONS_00009207-protein|Name=TCONS_00009207-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MRRFKVVLIGDSDVGKSSTFIRFRDGKFDDYIQSTIGLDFATREVSFQVN
EDDPETETKTEIQLWDTAGLERAGRMTSNYYNFSHAVILMYDVTDTTTMN
NLEMWYDNAKNDSNNTNTIYFLVGNKIDETPGEIQVSEGDACRFAKESLK
IDSDKYDVTYRISAKTGNGLNDLFQKITHILSGCSKQPAEKLDNTITDLT
DAGREKDKCGC Run BLAST on NCBI transcript from alignment at sc0000091:525065..535989+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009207 ID=TCONS_00009207|Name=TCONS_00009207|organism=Clytia hemisphaerica|type=transcript|length=10925bp|location=Sequence derived from alignment at sc0000091:525065..535989+ (Clytia hemisphaerica)
ctccttatactacctggggttttgtagaggtctgcgattcagactaacgC
AACCACCGTTCAAAGTGCTTACCGGGCGAAGCAAAGGGGGTCGAGCAAGC
TTCCCGCCCTTTTACCGCCTTTGATCCTCTTGTCGTTTTGGGGGATGCTT
TTTAgtagtcactttcatttttgctTGCCAAGTCGAAAAACAGCACACCA
TTTTTCTGAAATTCTTACttttcatcacaaaattttGTAGTTATGAGACG
ATTTAAAGTTGTTTTGATAGGTGACAGTGATGTTGGTAAGTCATCTACTT
TCATTCGATTCAGGGATGGTAAATTTGATGATTATATTCAGTCAACAATT
GGTTTGGATTTTGCAACACGAGAAGTCAGTTTTCAAGTAAACGAGGATGA
TCCTGAGACAGAAACAAAAACTGAGGTATATCCTTTAATCACTGTTTaac
aaattgaaaatgtttctgGAGTCCAGTGCTAGGTTTTCTTCCAACAACAA
GGACTATAAGagctaccgtaagttggtctaatctcgacatccgtcttcta
atttcgacacccttctttagggtagggtggtcagaggaaatttcaaacct
acttgcagaataccaaaccaagtttaatggaaagccataaccatcagaag
aaaaatgagaggccatttaccttccaattctttaaagttccaaagataat
acattttgaagttcaatttttcaagcattttcgtgcacgcatcgccagcc
attttgtaccttcattacggcaccaaaagcgaaagtgttttatgaaaaat
tccgcGCGAGAGGTTTggtgcgagttttattttccgtagatgtagctgaa
acgggggtaattacaccataatctttcccttagcgcttgccaccggaaac
agcttgattcttactaatttcacatttggaaagaaaaaacattgttcttt
ctaaaaaattcacgttcaataaaaaattttgattttttcaatgaaaaaaa
cgtattttaagtacataatttgacttcctgaaaaatatacgttgctccaa
ccaacgaacgtggtacgtctcaaaagctaaactatCGCGGGGAACGATGC
AAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTGAAAAAACTCACCCgcgagtactcattttcaaa
ttttgaaggaacatgaagacatgatgtgctgattttttctgcaaaagata
gctgaataaattctctacactttggaaaaaatacttatgtTAAGAGGTtt
cctagactagtaaactagtcggttattacttataaccttataataaaact
gtcaatcaaataatgtaaacactaattaaatattcagcgcgcgtgagaga
aaaggaaaataaccgactagaagctacttccaacgctttttttcttcacc
taaaatcgtaaggagagacatacagatttctgtatgtctgacccgtgcgg
gattgcaattgtttttctttctgtttattgcgtttttagaaatgctcatt
tatttacaTGTTCCCaagttcaatgttactatgaaatatcatttagtcaa
aaaagttggatggattctcaaaaacctaaaaaaagttgtaaatttaaaca
acgttttttgagggaagtagcttctagtcgttgaaattcagaaaagaaac
gcaacttcaccccttcgattctttttatttggagcttgattttttgtata
tgggtctgctttctacgactagtttactagtctaagaaactcctagacta
tgctatagtctaagacgagtttcatctgagaggaacaaacgtgaagacgg
aattttttacgggagtagctgttgtcttagactatatcaaTTCGGTAGAA
AAgcggaaattttggatttgggttagcggtgtgatcggccggcccggttc
gaacaaatgtaaacaaacagtcgGGTCTAGCCGGTAATTGCCGCCACCAA
TTCTTGCTGCNtagagataggaataatatgaacaacccacggcatggccc
gaacatattcgggcctgttcggaccatgctcgggccacaaaaaagtatta
ttgaatcagcccgaacattttgttcggaccatgttcgggccatatgtatt
tacaattgaatttaattttatttacctttcctggtttatcatcatccatt
gttaaatattttcattagacaaattcaaagttccaaataccagtttgatt
cacaaagttgtatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naattttcctaacttaattggaaaatagatgattaacttttatatttgaa
caatatgtatatttgaagatgaagatttttaaatttgtttgcggTTGTGC
TTTTGAAAAtgcaacaaaatggcgaaaacttctgaaaataacacggaaat
ttcatcaaaatatggatCCTGCACCCCAAATGAATGctttataaatgaaa
taatacgGGATAACGATGTCTTGCAGTGTAGGAAGTGTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNtatatatttgaataaagatgaagatttttaaggcgg
caatcacaaatatcttcgtttcgcgtcgcccgaccgactctcgaaaattg
agtaaaattgagtcggtgagtcggtaaatttgtcggagtttttctgtcaa
tgacctttccttcgttcaaagaccgaccgaccgacttgttttagacccaa
cgagcaCGCGAAATAAAGATATTAGTGATTGCCGcctaaggaatttaaaa
tataaatattgggtcctgaaattacacgcgcgatcgtagcaagttttcga
aaatctggtccgaacatggtccgaaactgcgcggggccgcgcgggccacg
cacgggccatttaaaaaaagtattaatcaagaggcccgaacatgttcggg
ccatgccgtgggtcaataatatgaaagtcggaattggtgattgaaaaaag
atttatcctcccttaccactaagcaaataaaataatttcgaccttttttt
aatttttcagctctagaaaagggtgtcgaatttagtggtcgacattagac
caagttacggtagttTACTTTATATACttcaatttccaaattttgagata
tCTCGAGAGCAAACGTGccacactctgcaaactgggtTGAGATGAGGggc
tttcaaagtttttaaatatAAATGGCGACTTTCATGAGTAAAAATTTATA
GAActgtgagatcaggtaacttgcatcagtggaggctaacactGATGCAt
atccctcaaatgaatgacctggctggtaaGGGGAGCCGTCAGTGGTTTTT
CCAAGCACTCAAATGCCCCCGTTAGACGGAGGCattaaactcaattcaaa
ttgagtttcAGAAACTCaattggaaagaaaattttcagaaaagaagTAAA
AGATCAAATTTCACCATAATAAAATACTTTCTCACTCTTTCTTCCCCTTA
TTTAAGCCCATTAAACggaataaaatgaataaaacttgtagtaaaagttA
TTCAGTTATCACAGCTGCAGTTGATTCTTTTAATTGAGTTTAATGATTCT
TAGGGTTAAGGTCCTGCAAAGGCTAGTACCTTAGATAGAGTACTTCCTAA
AAgtgcaaaataaataaaaaatacatccacttcttcttctttatttttgt
aacttttttctaattctagtagagtttttttattatttgagCAGTTCTGT
ACCATTTGTTACACCATTTTATACAGGTTTTattaaatttgttaaaagaG
TTGAGAGGACTTTTCAGTAATTCATTCATTTTGTTCATCGCTAAATTCTA
GAAATTCATTCACTTTTAACCTTTTTAAAGTGCCAGTTAAGGCCAAATTT
TGCTCAGCTTTCGGGGGCTTTGCCCCCTGAACCCCCACCAGGGCTAGCCC
TGGACCCACTGGGGGGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCAGGGCTAGCCCTGGACCCACTGG
AGGGCTCAAGACGCCCCCCAGACCCCCAGCCTTTATTATCCAGCCTTTGG
CTGGATATCACGGCTTACGCCTttgatgaaaactcaatttgCAAGTAAAA
ACGGAGGCATTGCTTAGTGCTTGGAAAAACCCCTggccgtccatattcat
ttgacaacgcaaaacgtcaaattgaggTTATGAGGAGAtggggggttttc
aaaagttacgtttgacgttataagaaatcaaaggtataccgtgagatcag
gtaacttgcatcagtgtcaggctaacatgcatagccctcgaaTGAATGAC
CTAGCTGGTCAttaccaggggatgtcaatcaaaaatttcGATTGTCGAAC
CGATCGAAtataatcgaaaccaatcgaagtgattgaccGAATTGATCGAA
GCCAATCGAAGTTATCGATCGAAACGATCGAATTCAATCGAAGATTTACA
TCATTTTAAGattgatttggttcgattgtacTCGATTGGcttcgatagac
cttttttcaaagaggccatcctgttgaataattatgtagtccagcagaaa
aacaatgatacacccatgcataattattacaatatgcatgaaacagtaat
tatgcattgcTGTATCATTGTTTGTATGGCTGGACTACATAATTATTCAG
CAGGGatgcctctttgaaaaaaggtctattgactcGGGACAGTcacttcg
attggtttcgattatattcgattggttcgacaatcgaaattttcgattga
catccttTTTTGTTAGTGGACTAATGAAAAGCCCGAACAAACAAATGAAG
CGCTCTTTTTGGTCAAATATCATGTACCTAACAGGGCAATCGCTTCTTAA
TCTTGCTTAcgaggcgtacaaactttcgcgagtggAAACTTTTGGCGAGT
GGAAACTTCTCGCGATTTTCacgaattttagccctttttgtGAAAGTCAC
TCAGTATCTTTGAACATTATGGAAAGGATTATTCGCAAAAGTTAAAgttc
acgaaaaaaaaattttttgtcgtATTTGGGGGAATATGTAAATAAATGTT
GTAACTTTCGTGATTTTTTGACCTTGCGAAAGGTTCATCTCCCTAAAgtc
tgtacgcctaaagtattctcCACTGACGATGTAGTTTTCCGTTTTGCTCT
ATAttgcctttgctcacctaaacagacaaCGGTATTTTGGTGTCTTTACC
Gttgtcgagcaaagtggacaatgattttggagacatatcagctttgcttt
ataccatccccctcgatttatctcaaATAAAACTCGCTAATCTCAGATCG
GTGGGAGATCTCTCAAGATCAGTGGTCGAATTGAATGGAAGagaatcgaa
tcaatcgaattcaATCGAAGTAAATTGAAGTGATTGTTCGAATCGATCAA
ACTCAATCAAAGTGCTTGATCGaacaatcgaaaccaatcgaagtgattga
tcgaATAGAACGAATCCAATCGAAGACGATAGAAGATTTACATCTTTTtc
ccattttgattgaattcgattgttcgatcaatcacttcgattgagttcga
tcgattcgaacaatcacttcgatttaCTTCGATTGAATACGATCGATTCA
ACTCCAAATCgaattcgattgagttcgattgacatcccctggtcattaaa
atacaaaattaaatcaaaacaaaaatggtagagtagagccgcaagcgaag
ctgcgtagttcatttgttttgaaattttgctgcttagattgattggtcag
tcatttgagggctatgcgtgttagcctccactgatgcaagttacccggtC
TCACTgtacctttttgtgaaaatcgtgAATATTTGTTTTACCACCAACCA
Cactatatatactttttaagctgtcaaaaatatatttgtgtatgaattac
atgaaaacttgctcgcataatcccattggttcATGCTATGAtatacatca
tattttcattgtttccgCAATCAAGCGAACCACAACGCACAAGTGGGCaa
atgtatgtatgtaatagtttatttcaagttgacgaacaggtagcaacaaa
ggctaataaaagtcaacgctactttacaatttgtaaggtgattacagNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTTTAATTCTTTCCACTTGATTATGAA
CTTTTCTACCGAGTTCTTTTGCCGGAGAGCAACAAGTTATACACACGTAT
TTTCGGtaacctttatttaaaaacaacttTAACTGGTATGGTGGTAATAA
AGGATAAAAGCAAGTCCGAGAAAATTCATCAAGCCAAGATATTCAaagca
aaagatgaaaattttgatttaaaaacagcTATATTTCGTATAGTATCATA
TACATcattcaggcaaaaaaaaaaaaaaaggtagTCCAGTGCAGGCATAA
TGTAGCGTTCGTTGGCATTTATGACATTGAATTCTCATTTTTTCATCGTC
TTTTATACAATTATGCTCGGTACATCGATTGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNggggggggggttcagaggataacgtcaatttgacgttatgcgttgtc
aaatgaatatggatgGGTCCCCTAAAATACAAGATAAAAccgaaacaaaa
atggtagaatagAGCTGTGTAGTtcacttgttttgaaattttgctgcttt
ggttggtcaggcatttgatggctatgcaagtttccctccactgatgcaag
ttacctgacttcacggtaccatagaccttttcgcctttccatcctgTCAA
AATACATCCATGGTTAAGCTGAATAATTTATCTACCTGTTGTAAAAAGAA
CGAAATTTTGTGGCTTACTCAGTCAACTTAAATATATTAAAGCATGAAGT
GTGAGTAAAATATGTGGCTGACAAAaaagccacaaaaaagtatgtacatt
taacactttttggaaaattcagcCTTTCTTCTTTCAAGTCTTTCAAGTCT
TTCAAGTCCCATTCAGAGATCACTTTTCAATATCGTGTGGCttacacttt
aaaaaaaactagaatttttgaactgcagccacaattttgactcaaataac
aaaattttttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAAATCTCTATGGCTGA
CTCAAAAAATATGAAGAGTTAttccaaaaagttgattttgagcatttttt
acaatgtcacactatttttgattagCATCAGCAGTACTTTGTGtgcattt
ttataattttgatgtgCGCCAGTGTGCATATATaaatggaaaaagctgac
tttggcagaaaaaagcaaaacaaatgaaaatgaaaacatttacagtgtaa
acaaaatggctgttggctggaagtaaAATACATGGCTGATATTTTGACGT
TGTTTTCAGcagtttttaaagtttttagagcttgttaaagagtttttatg
gtgaGTTGATTATGCGTGTCTGCCAGGGTTTCCttgtctgtcaacaaggg
ttcacacacagactgtttcagactaatctacctgtaCCAAATTCTATAGT
ATAATTGTTTCTAAAATGTCGAGCTTTGATTCCCAGGCTATtcaatttta
tgcaaaaaatattcattttagaTTCAACTTTGGGATACAGCAGGATTGGA
GAGAGCTGGTCGTATGACATCAAATTATTATAACTTCAGTCATGCTGTTA
TCCTTATGTATGACGTCACAGATACAACAACAATGAACAACTTAGAAATG
TGGTATGACAATGCAAAAAACGATTCCAATAATACAAACACTATCTATTT
TCTTGTTGGGAATAAAATTGACGAGACACCTGGTGAGATTCAGGTTTCAG
AAGGTGATGCATGTAGATTTGCTAAAGAAAGTTTGAAGATTGACTCCGAT
AAATATGATGTTACATATCGCATCTCTGCTAAGACAGGAAATGGATTAAA
TGATCTGTTTCAGAAAATTACACACATCTTGTCGGGATGCTCTAAACAAC
CGGCTGAGAAGTTGGACAACACAATCACAGATTTAACAGATGCAGGTAGA
GAGAAAGACAAGTGCGGTTGCTAAAGCATCCAGGGATGGAAAAATGTTAT
CCTGTTCattagaaatgaatgaaaaactGTAGAATTTAATTAAGTAGAGT
ATTTCAATCTTTGtaatttaatatcttttaaggTAGATTAAAAACCATTC
CATTCACCCATTTTGTTGAGCAAGAgtagaaattaaaattaagTGAGATG
CGATTTTATTCTAGAATGTAATTGTAGTGAAATTAATTCTTTGTTAAACA
GTAAATTTTTTACTTTCGgattttattattgattttATATCGATTTTTGT
ATATTTGAGGCAATTTTAGGATTATATTTGTGTAATAGTTCAGATTTTAT
ATATGACTAAGAGataaatttatatattttttattatttcacaTCACAGC
ACCATCTTTcctaatattttttttacatattttttataaattaaaaatac
aaTTACATGGACCAGTGCCGAAAAT Coding sequence (CDS) from alignment at sc0000091:525065..535989+ >TCONS_00009207 ID=TCONS_00009207|Name=TCONS_00009207|organism=Clytia hemisphaerica|type=CDS|length=1272bp|location=Sequence derived from alignment at sc0000091:525065..535989+ (Clytia hemisphaerica)
ATGAGACGATTTAAAGTTGTTTTGATAGGTGACAGTGATGTTGGTAAGTC
ATCTACTTTCATTCGATTCAGGGATGGTAAATTTGATGATTATATTCAGT
CAACAATTGGTTTGGATTTTGCAACACGAGAAGTCAGTTTTCAAGTAAAC
GAGGATGATCCTGAGACAGAAACAAAAACTGAGaTTCAACTTTGGGATAC
AGCAGGATTGGAGAGAGCTGGTCGTATGACATCAAATTATTATAACTTCA
GTCATGCTGTTATCCTTATGTATGACGTCACAGATACAACAACAATGAAC
AACTTAGAAATGTGGTATGACAATGCAAAAAACGATTCCAATAATACAAA
CACTATCTATTTTCTTGTTGGGAATAAAATTGACGAGACACCTGGTGAGA
TTCAGGTTTCAGAAGGTGATGCATGTAGATTTGCTAAAGAAAGTTTGAAG
ATTGACTCCGATAAATATGATGTTACATATCGCATCTCTGCTAAGACAGG
AAATGGATTAAATGATCTGTTTCAGAAAATTACACACATCTTGTCGGGAT
GCTCTAAACAACCGGCTGAGAAGTTGGACAACACAATCACAGATTTAACA
GATGCAGGTAGAGAGAAAGACAAGTGCGGTTGCTAAATGAGACGATTTAA
AGTTGTTTTGATAGGTGACAGTGATGTTGGTAAGTCATCTACTTTCATTC
GATTCAGGGATGGTAAATTTGATGATTATATTCAGTCAACAATTGGTTTG
GATTTTGCAACACGAGAAGTCAGTTTTCAAGTAAACGAGGATGATCCTGA
GACAGAAACAAAAACTGAGaTTCAACTTTGGGATACAGCAGGATTGGAGA
GAGCTGGTCGTATGACATCAAATTATTATAACTTCAGTCATGCTGTTATC
CTTATGTATGACGTCACAGATACAACAACAATGAACAACTTAGAAATGTG
GTATGACAATGCAAAAAACGATTCCAATAATACAAACACTATCTATTTTC
TTGTTGGGAATAAAATTGACGAGACACCTGGTGAGATTCAGGTTTCAGAA
GGTGATGCATGTAGATTTGCTAAAGAAAGTTTGAAGATTGACTCCGATAA
ATATGATGTTACATATCGCATCTCTGCTAAGACAGGAAATGGATTAAATG
ATCTGTTTCAGAAAATTACACACATCTTGTCGGGATGCTCTAAACAACCG
GCTGAGAAGTTGGACAACACAATCACAGATTTAACAGATGCAGGTAGAGA
GAAAGACAAGTGCGGTTGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009207-exon-sc0000091-1491911889:525065..525489 | TCONS_00009207-exon-sc0000091-1491911889:525065..525489 | Clytia hemisphaerica | exon |
| TCONS_00009207-exon-sc0000091-1510915933:525065..525489 | TCONS_00009207-exon-sc0000091-1510915933:525065..525489 | Clytia hemisphaerica | exon |
| TCONS_00009207-exon-sc0000091-1575043694:525065..525489 | TCONS_00009207-exon-sc0000091-1575043694:525065..525489 | Clytia hemisphaerica | exon |
| TCONS_00009207-exon-sc0000091-1491911889:535086..535989 | TCONS_00009207-exon-sc0000091-1491911889:535086..535989 | Clytia hemisphaerica | exon |
| TCONS_00009207-exon-sc0000091-1510915933:535086..535989 | TCONS_00009207-exon-sc0000091-1510915933:535086..535989 | Clytia hemisphaerica | exon |
| TCONS_00009207-exon-sc0000091-1575043694:535086..535989 | TCONS_00009207-exon-sc0000091-1575043694:535086..535989 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000091 | supercontig | sc0000091:525065..535989 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
BLAST of TCONS_00009207 vs. Swiss-Prot (Human)
Match: RB33A (Ras-related protein Rab-33A OS=Homo sapiens GN=RAB33A PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 5.154e-25 Identity = 59/148 (39.86%), Postives = 84/148 (56.76%), Query Frame = 3
Query: 237 VVMRRFKVVLIGDSDVGKSSTFIRFRDGKFDDYIQSTIGLDFATREVSFQVNEDDPETETKTEIQLWDTAGLERAGR-MTSNYYNFSHAVILMYDVTDTTTMNNLEMWYDNAKNDSNNTNTIYFLVGNKIDETPGEIQVSEGDACRFA 677
V +R FK+++IGDS+VGK+ RF G F D ++TIG+DF RE + ++ + K ++Q+WDTAG ER + M +YY HAV+ +YDVT T+ NL+MW + LVGNK D +IQV A +FA
Sbjct: 32 VQIRIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDF--REKTVEIEGE------KIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCD-LREQIQVPSNLALKFA 170
The following BLAST results are available for this feature:
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