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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008909 ID=TCONS_00008909|Name=TCONS_00008909|organism=Clytia hemisphaerica|type=transcript|length=3904bp
tatcaaaactCGAAAAATAACGAAGTTATTTTTTACTCAGAACAGGATTT
GAGGGGTGATAATAATTGATCTACtatcgggtacctaataagcgtaCCCC
CCcccactaattaatttttcgaaaattttccacccaggacattcttattc
caaccccttattaaattttcagaaagtattttgaaaattcatctCTTTTT
TGCCCTATTCTTCTGCATTAACCcccttttcaaaacttttccaccaagga
catctttattccaaccccctcccccccgcttattaagttttgagattttt
tccacccacccccgcttattccagaccccccgtttattagttACCCGAGA
GTATGGTGGAAAGAGCGAAACAAAACTCATAACAGTCTAGTATTTTAATT
TCGCAGATGAAATTCATTTTTGTttgcaggaatttaatttcgcgggtgag
atcttttcaaattttctttggtaATTAATTTCTAAATGCGGAAATACGGT
TAAAATACaatgaattttcttcttttgttttgaaatgtaCATTTATTTAT
CTAATGATAAAGTAAGAATAAATGATAATAAATTCTTACAATAAATTATT
GGAACATTgaatattgtttgaaattttagttttaagaGGGGGAGAAAGTG
CCTACTTcgcaacaaaaaaaaagaacgacaaccccgaccgaaagacTGTA
CCACCCTTTTCTGTTCATTACTCTTATTAAGAATAACGAATAATAGTCTT
TATAATAAGAATCTACGTATGTGTTttgactttgttttgaaaacaaaaca
atagatGAGAGATAGGCATATGTGGAAAATCAATATTATATTACTCAGTT
AAGTCGTTGCATATAGCTGTTAACGATGATcgatatttccaatttttatg
AACGACtgtattttttatgatttttttgaatttttctgagCTATAACCAC
ATCTGACTGTTTGCTCCAACATGTAACCATACGAAAAGATGTCAGAAACT
ACTGACTGGGCGCTTTGGCCTTCAACCACTTCTGGAGCAACATGACGACG
AGTTTTTTTGTACTTCTCCTTCTCTTCGACACTCAATTTGAAATGTCTAC
CTCTCTCAATTTTACAACCGCAATTAAAATCAATGATAACAGGTTGTATC
GTATTTCGATCTCCATGCAAAACAACGTTATCAAGTTTTAAGTCATTGTG
AAGATACCCGCTTACGTGAATTACATTAAGTGCTTCTGCTATCTGAAGAA
ATATGAGGTGCATTTTCTGAATATCAACAGGAAACTTTTCCTTCAAGAAA
GAGTAGAGAGACTTTGGTCCACATTCAAAAGAATAAAATTGCATCACCAA
TTTCAAAGGCGACTCATCAACGCAAATGCCAACTAAAGACGGCAGACCGT
TATGGAACCGCAGATTTGCAATGATTTTAGCCTCCTTTAAAACCATATTG
CGATTTTGTTCAAAAGTATACTTCTCATTGACTAATAATTTCGCCGCAAC
AATTTCACCCTTAAAATGTCGAAGCTCAACACTCCCAAACGTTCCCCTAC
CAATTGTCGAGCTCGATTGTACTGGCTTCAAATGCTCTGATTGCAAATAA
AATGAAGCTGGCAAATGAAACTCTTTATTCTCCTTGAAAGCTTTCAGcag
cttttctttttcttttctttctgaaaCAAATTCATTCTGGTAAGTTTTAA
GTATATATACATACAGCATTCGTTCGCTCCAACTCCCCCttccttttttt
caaatcattgaTTTCATCTTTGTCTTTCATTTTCAGCCCACAGTAAACAA
GATTCCGTTTATATCCAATAcgcatttttttaattgaatcaGGAAATTCC
GATTTCAAAGCACGACCAAGTGATGTTTGAGTTTTGACGATGTTGTTTGT
TGAAGCCTCCTTGTATAAATCATCGAATTTAAAACATTGATCGTGTTTTC
CATCGCATGTAAATGGTGATACATTACATTTCAGCCTGTTAAAAAAAAGC
ATTTAAGAGATTATTATTCACCAGGATGTATAAAATTATCTTATGCCAAA
GTTCTTCTCGACGCAAAtccgattttttggaaaatcggggaaattttcgg
aaaaaataggggaaatattcaaaaatcgggaaaatttgcacaaagtcggg
taaaaaagggaaaattcacgtgtTCACGCAAAAGACAGgtcagattcacg
cattcacgcaatcgaaaaaagtggattttcacgttcacgcaagttttcaa
ttcatgcattcacgcaatttttttcgattttcacgcattcacgcaaccaa
aaagctcaaaaggtaaaaattttgagtattttgtaGAAATTCAACATCAC
GAATCGGCAagataaacatttttattaCTTACCAAGATCTTGTTGCGTTT
GCACTACTACCAGCCATGGCACGTAATTCGATTTCAATTCAATTCGAGGA
GCGGGCTGGGAGAGAAGTCGTCtttctgtttctttttttagaaaaatggc
cACATCTTGGGTGTGAGTTTCTCTTTTAGAGGGTGAAACAAGAACAATCG
AAAAGGGTCTAATTCAGCCAATCAACGTCAAGCACGTCAAATCAAACCCA
CACGCAAAATGTGGGAGGGGCGTTGTTTGATTCCCGCCATTTCATCCTAA
AAAAAACCATGTCTATGAAAAAGGTTTAACCGTGTCTATGAGATTTATCT
GCAGTAAGTTAGGGCGCATAGTCGGGCGGTAAGCGCAAATAAAATATGTG
GACTGGAGACGAGCTTATTGCTCTACTGATCAAAAACTAAGGATCGTTAT
AATTCAGAATGATTATTATGAGATCTGAGTAAACTCTCTTTGAATTAATC
TTGAAAATGACTCAAACAACAGTTAACATATTTAAAAAGACAGAATAgtg
taattatttaaagataatgTCTATGTATAAACTTATTGATTACTGATCAA
TTTTTACATTCTCACAACTATATGTAGCTACCATTTTGTTTAATTCTACT
TTCGATTTCGACTTTGGCGGGAAAATAAGACTAGAAAGGGTCTTGTTTTT
TTCTGTCATATTTTAATTGACTTGCTGGTGAGAGGTTCatcttgtaattt
ttttgagttgGATGTATCTTTTACTACTGTGATGTTTTTGGCTCGTTGAA
cttattttgtttccaaaagTATACAATGTGACAATCGCAGCTGTTTCAGC
CCAATCTATCTGAGTTATGTCCAGTACTATGACATATTACAGCTGGCAGC
CAGCGGCAGTATCCCACACAAGTTATCTCCATAATGTGATCTCAGACTTA
GTTTTGAAACGCAATTTTATAAATGGTTATGTTAATATAACGTTAATAAC
GAAGTTGAAAGTCGTTCTCAGTAAAATTCTCGGAAAAACGACAAATTCTC
GATAaacactcacaaagataaattaTGGCAGCACACCATCCCACCTATTA
TTTCTATAATATGATCTCAGActtagttttaaaaacaaaattatatcaat
agACACCTCCTTAAGACAACTTACAGATGGAAACTCCGTGAAAAAACGAC
CGAAATATAACACAAGTTTCTGATCAGAatcccagcgcgctatccgttga
gccacactggcacatcaaatcacaaaatttggaaatacttatagaatgac
aaaaaagacgggggtaatgttattataatatgggcaAAATTgcacctttt
ttaacctgactgaaattcgagccgttactagcaaccctgcggggcccaag
gcgccgagtatgcacccggcacagtgacaagccgttactagcaaccatta
cctaagcaattccaaacaacaaaacccccggaagaTTTAAAATGTCGAAA
TGATCACTATACAAGAGTTTTTTTccgttttgctcgtgcagcgagcagca
aatt Run BLAST on NCBI protein sequence of TCONS_00008909-protein >TCONS_00008909-protein ID=TCONS_00008909-protein|Name=TCONS_00008909-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MLYVYILKTYQNEFVSERKEKEKLLKAFKENKEFHLPASFYLQSEHLKPV
QSSSTIGRGTFGSVELRHFKGEIVAAKLLVNEKYTFEQNRNMVLKEAKII
ANLRFHNGLPSLVGICVDESPLKLVMQFYSFECGPKSLYSFLKEKFPVDI
QKMHLIFLQIAEALNVIHVSGYLHNDLKLDNVVLHGDRNTIQPVIIDFNC
GCKIERGRHFKLSVEEKEKYKKTRRHVAPEVVEGQSAQSVVSDIFSYGYM
LEQTVRCGYSSEKFKKIIKNTVVHKNWKYRSSLTAICNDLTE Run BLAST on NCBI transcript from alignment at sc0000088:10414..14317 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008909 ID=TCONS_00008909|Name=TCONS_00008909|organism=Clytia hemisphaerica|type=transcript|length=3904bp|location=Sequence derived from alignment at sc0000088:10414..14317 (Clytia hemisphaerica)
aatttgctgctcgctgcacgagcaaaacggAAAAAAACTCTTGTATAGTG
ATCATTTCGACATTTTAAAtcttccgggggttttgttgtttggaattgct
taggtaatggttgctagtaacggcttgtcactgtgccgggtgcatactcg
gcgccttgggccccgcagggttgctagtaacggctcgaatttcagtcagg
ttaaaaaaggtgcAATTTtgcccatattataataacattacccccgtctt
ttttgtcattctataagtatttccaaattttgtgatttgatgtgccagtg
tggctcaacggatagcgcgctgggatTCTGATCAGAAACTTGTGTTATAT
TTCGGTCGTTTTTTCACGGAGTTTCCATCTGTAAGTTGTCTTAAGGAGGT
GTctattgatataattttgtttttaaaactaagTCTGAGATCATATTATA
GAAATAATAGGTGGGATGGTGTGCTGCCAtaatttatctttgtgagtgtt
TATCGAGAATTTGTCGTTTTTCCGAGAATTTTACTGAGAACGACTTTCAA
CTTCGTTATTAACGTTATATTAACATAACCATTTATAAAATTGCGTTTCA
AAACTAAGTCTGAGATCACATTATGGAGATAACTTGTGTGGGATACTGCC
GCTGGCTGCCAGCTGTAATATGTCATAGTACTGGACATAACTCAGATAGA
TTGGGCTGAAACAGCTGCGATTGTCACATTGTATActtttggaaacaaaa
taagTTCAACGAGCCAAAAACATCACAGTAGTAAAAGATACATCcaactc
aaaaaaattacaagatGAACCTCTCACCAGCAAGTCAATTAAAATATGAC
AGAAAAAAACAAGACCCTTTCTAGTCTTATTTTCCCGCCAAAGTCGAAAT
CGAAAGTAGAATTAAACAAAATGGTAGCTACATATAGTTGTGAGAATGTA
AAAATTGATCAGTAATCAATAAGTTTATACATAGAcattatctttaaata
attacacTATTCTGTCTTTTTAAATATGTTAACTGTTGTTTGAGTCATTT
TCAAGATTAATTCAAAGAGAGTTTACTCAGATCTCATAATAATCATTCTG
AATTATAACGATCCTTAGTTTTTGATCAGTAGAGCAATAAGCTCGTCTCC
AGTCCACATATTTTATTTGCGCTTACCGCCCGACTATGCGCCCTAACTTA
CTGCAGATAAATCTCATAGACACGGTTAAACCTTTTTCATAGACATGGTT
TTTTTTAGGATGAAATGGCGGGAATCAAACAACGCCCCTCCCACATTTTG
CGTGTGGGTTTGATTTGACGTGCTTGACGTTGATTGGCTGAATTAGACCC
TTTTCGATTGTTCTTGTTTCACCCTCTAAAAGAGAAACTCACACCCAAGA
TGTggccatttttctaaaaaaagaaacagaaaGACGACTTCTCTCCCAGC
CCGCTCCTCGAATTGAATTGAAATCGAATTACGTGCCATGGCTGGTAGTA
GTGCAAACGCAACAAGATCTTGGTAAGtaataaaaatgtttatctTGCCG
ATTCGTGATGTTGAATTTCtacaaaatactcaaaatttttaccttttgag
ctttttggttgcgtgaatgcgtgaaaatcgaaaaaaattgcgtgaatgca
tgaattgaaaacttgcgtgaacgtgaaaatccacttttttcgattgcgtg
aatgcgtgaatctgacCTGTCTTTTGCGTGAacacgtgaattttcccttt
tttacccgactttgtgcaaattttcccgatttttgaatatttcccctatt
ttttccgaaaatttccccgattttccaaaaaatcggaTTTGCGTCGAGAA
GAACTTTGGCATAAGATAATTTTATACATCCTGGTGAATAATAATCTCTT
AAATGCTTTTTTTTAACAGGCTGAAATGTAATGTATCACCATTTACATGC
GATGGAAAACACGATCAATGTTTTAAATTCGATGATTTATACAAGGAGGC
TTCAACAAACAACATCGTCAAAACTCAAACATCACTTGGTCGTGCTTTGA
AATCGGAATTTCCtgattcaattaaaaaaatgcgTATTGGATATAAACGG
AATCTTGTTTACTGTGGGCTGAAAATGAAAGACAAAGATGAAAtcaatga
tttgaaaaaaaggaaGGGGGAGTTGGAGCGAACGAATGCTGTATGTATAT
ATACTTAAAACTTACCAGAATGAATTTGtttcagaaagaaaagaaaaaga
aaagctgCTGAAAGCTTTCAAGGAGAATAAAGAGTTTCATTTGCCAGCTT
CATTTTATTTGCAATCAGAGCATTTGAAGCCAGTACAATCGAGCTCGACA
ATTGGTAGGGGAACGTTTGGGAGTGTTGAGCTTCGACATTTTAAGGGTGA
AATTGTTGCGGCGAAATTATTAGTCAATGAGAAGTATACTTTTGAACAAA
ATCGCAATATGGTTTTAAAGGAGGCTAAAATCATTGCAAATCTGCGGTTC
CATAACGGTCTGCCGTCTTTAGTTGGCATTTGCGTTGATGAGTCGCCTTT
GAAATTGGTGATGCAATTTTATTCTTTTGAATGTGGACCAAAGTCTCTCT
ACTCTTTCTTGAAGGAAAAGTTTCCTGTTGATATTCAGAAAATGCACCTC
ATATTTCTTCAGATAGCAGAAGCACTTAATGTAATTCACGTAAGCGGGTA
TCTTCACAATGACTTAAAACTTGATAACGTTGTTTTGCATGGAGATCGAA
ATACGATACAACCTGTTATCATTGATTTTAATTGCGGTTGTAAAATTGAG
AGAGGTAGACATTTCAAATTGAGTGTCGAAGAGAAGGAGAAGTACAAAAA
AACTCGTCGTCATGTTGCTCCAGAAGTGGTTGAAGGCCAAAGCGCCCAGT
CAGTAGTTTCTGACATCTTTTCGTATGGTTACATGTTGGAGCAAACAGTC
AGATGTGGTTATAGctcagaaaaattcaaaaaaatcataaaaaatacaGT
CGTTcataaaaattggaaatatcgATCATCGTTAACAGCTATATGCAACG
ACTTAACTGAGTAATATAATATTGATTTTCCACATATGCCTATCTCTCat
ctattgttttgttttcaaaacaaagtcaaAACACATACGTAGATTCTTAT
TATAAAGACTATTATTCGTTATTCTTAATAAGAGTAATGAACAGAAAAGG
GTGGTACAgtctttcggtcggggttgtcgttctttttttttgttgcgAAG
TAGGCACTTTCTCCCCCtcttaaaactaaaatttcaaacaatattcAATG
TTCCAATAATTTATTGTAAGAATTTATTATCATTTATTCTTACTTTATCA
TTAGATAAATAAATGtacatttcaaaacaaaagaagaaaattcattGTAT
TTTAACCGTATTTCCGCATTTAGAAATTAATtaccaaagaaaatttgaaa
agatctcacccgcgaaattaaattcctgcaaACAAAAATGAATTTCATCT
GCGAAATTAAAATACTAGACTGTTATGAGTTTTGTTTCGCTCTTTCCACC
ATACTCTCGGGTaactaataaacggggggtctggaataagcgggggtggg
tggaaaaaatctcaaaacttaataagcgggggggagggggttggaataaa
gatgtccttggtggaaaagttttgaaaagggGGTTAATGCAGAAGAATAG
GGCAAAAAAGagatgaattttcaaaatactttctgaaaatttaataaggg
gttggaataagaatgtcctgggtggaaaattttcgaaaaattaattagtg
ggGGGGGGtacgcttattaggtacccgataGTAGATCAATTATTATCACC
CCTCAAATCCTGTTCTGAGTAAAAAATAACTTCGTTATTTTTCGagtttt
gata Coding sequence (CDS) from alignment at sc0000088:10414..14317 >TCONS_00008909 ID=TCONS_00008909|Name=TCONS_00008909|organism=Clytia hemisphaerica|type=CDS|length=879bp|location=Sequence derived from alignment at sc0000088:10414..14317 (Clytia hemisphaerica)
ATGCTGTATGTATATATACTTAAAACTTACCAGAATGAATTTGtttcaga
aagaaaagaaaaagaaaagctgCTGAAAGCTTTCAAGGAGAATAAAGAGT
TTCATTTGCCAGCTTCATTTTATTTGCAATCAGAGCATTTGAAGCCAGTA
CAATCGAGCTCGACAATTGGTAGGGGAACGTTTGGGAGTGTTGAGCTTCG
ACATTTTAAGGGTGAAATTGTTGCGGCGAAATTATTAGTCAATGAGAAGT
ATACTTTTGAACAAAATCGCAATATGGTTTTAAAGGAGGCTAAAATCATT
GCAAATCTGCGGTTCCATAACGGTCTGCCGTCTTTAGTTGGCATTTGCGT
TGATGAGTCGCCTTTGAAATTGGTGATGCAATTTTATTCTTTTGAATGTG
GACCAAAGTCTCTCTACTCTTTCTTGAAGGAAAAGTTTCCTGTTGATATT
CAGAAAATGCACCTCATATTTCTTCAGATAGCAGAAGCACTTAATGTAAT
TCACGTAAGCGGGTATCTTCACAATGACTTAAAACTTGATAACGTTGTTT
TGCATGGAGATCGAAATACGATACAACCTGTTATCATTGATTTTAATTGC
GGTTGTAAAATTGAGAGAGGTAGACATTTCAAATTGAGTGTCGAAGAGAA
GGAGAAGTACAAAAAAACTCGTCGTCATGTTGCTCCAGAAGTGGTTGAAG
GCCAAAGCGCCCAGTCAGTAGTTTCTGACATCTTTTCGTATGGTTACATG
TTGGAGCAAACAGTCAGATGTGGTTATAGctcagaaaaattcaaaaaaat
cataaaaaatacaGTCGTTcataaaaattggaaatatcgATCATCGTTAA
CAGCTATATGCAACGACTTAACTGAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008909-exon-sc0000088-1491911889:10414..14317 | TCONS_00008909-exon-sc0000088-1491911889:10414..14317 | Clytia hemisphaerica | exon |
| TCONS_00008909-exon-sc0000088-1510915933:10414..14317 | TCONS_00008909-exon-sc0000088-1510915933:10414..14317 | Clytia hemisphaerica | exon |
| TCONS_00008909-exon-sc0000088-1575043694:10414..14317 | TCONS_00008909-exon-sc0000088-1575043694:10414..14317 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088 | supercontig | sc0000088:10414..14317 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
The following BLAST results are available for this feature:
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