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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008769 ID=TCONS_00008769|Name=TCONS_00008769|organism=Clytia hemisphaerica|type=transcript|length=4562bp
AAAACTTTGAATTGATTGAGGGCTTACTAGCTGATGTCTCTTCAACATAA
ATATAGGTAGTCTTAAACGATTATCCTGTAGAATTTAGAAAAGCAGAGAA
ACGAGAGAGCTTCAAATTTCAAGACAATATGGTTTTCCATGTTTTGGGTT
TTGTATTCTATTGAAAAGTTCAATATTTAAAgatttaaattgttTGTGAA
GAAGAGAAGAACACGTTACTAGATTATAAATGATGAATTCTGACATTGTG
GAACAAGAAGTCCATTGGTTTTGGACTGAAAGCTTTTGGTTACCTCCTGG
AAGAACATGGAAAGATTATGAATCCACTGACACACTCACTAAAGCAAATT
TCCGAGATTTATACTTTATACCGATATATGTCATTATGTTGACGTGCGTC
CGATTTCTATTCGAAAGATATATAGCAAAACCATTTTGTGTATATCTTGG
AATTGAAAACAAGACCTTTGAACGCAATAAACTTTGTGAATTGGTTTACG
ATACGGTCACTAAGTAtccaaaaacaaaggaatatgAAGCCATTGCCAAG
GAGACTGGCATGACCACAAGTGAAGTGAATTCTTGGTTTCGACGCCGCAG
AGCAAGTTCTAAGAACTCCAAAATGAACAAAGCTACTGAGACCTGCTGGA
GAGCCTTTGTTTACTTATTACTATTCATCTACGGGCTTTTAATACTGGCT
AAAAGTGATTGGTTTATGGATCACTCCACTTGGCTACCAGGCTATATCAA
TCATCCTTTTACAATCGAATTGAAAGTATACTATTTCGCTGAGATCTCAT
TCTACTTTTCACTCCTTTTCTCGCAATTTTACGACACAAAACGTAAAGAT
TTCCTACAGCAGTTTATCCACCACGTAGTCACCCTCACACTTTTACTGGG
TTCGTTTCTCCTATCAGCATACCGTTTTGGAGCTATCATCATGTTTATAC
ACGATACAGCAGACTTTTGGTTAGAATCTGCTAAACTAACAAATTACGCT
AAACTACAAAAAGTTTGCGATGTGTTATTTGGTATTTTTGCCATCTTATT
TTTTGTTACGAGACTCATTTATTACCCTGGATGGGTAGCATACGCATTCT
TCCATTATAACAATGAAAGTAAAGGTATTGTTTTTAATACTTTAGTTTGC
CTCTGTTTCGTACTGttattcttgaacttttattGGGGATTTTTGGTCTT
GAAATTGGCATACAAAGTACTGTTTTCTGGTAAAGGAGCCTCAGATACTA
GAAGTGATACCGAAGATTCCAGTGGTAGTGAGGATTGATGGATATCATTT
GTATTGAATGCTTAGAATTAAATGCGAtgttagaaacttttttttactat
aaatGATTATCATTATAGATGCTACAAACTTTGGAATTCTGGTGTTTTGt
ggttagttttttttttaattactgGTCTTTTGTCCGGACAATCTGTAGAA
TCTGCCTCATTTTTTTAAGTTGAGGCACACAAACATTTTTACATCTTTAA
CACTAGTTCAATGACTGTGGCGTAATAAAATGGGATGGAATTTATTGTAG
AGGTCACATTGGAGGCTCAACACCCCTTGATTCTTGAAGGGTTTCTCGAA
AACGCCTTGAATTTGACAACCGACTCCGCCGGAACTACTTTTTAGAGTCA
GACCTCTGGCTTCATTTTCTTCAACAACTTTCTCTTAGGCTAAGAACCCA
ATTTTTCTACTATACAAAACGTTTTTGAATATGACTCACTATCAAGCTTG
AATTGTAACACAGTAGTGTTCTTCCATcttacgtttttttttatattgca
AACTTATAATATATATCCAAGTTTGAATTTATACAACAGAACAAATTATA
TTCACGGCCTTTCACACAATCTTCCTCATAACACACAGATTAGACACCTC
CTTCTGACAGACCCGGTGGGGCCCCCTCCCACTGGAAGAATTGGCCAAAA
TAACGTCCCCAGTGGATGATtttactccaatttttgtcgccgttggaaaa
ataaaaaaagcaaatcCTCGCACTGCAAGATATCGATTTGAATATCCCTa
gctgaattttctgacttgaaaaaaatggaatgcaaatcccaagccataaa
aaaagataaaaatttccctatcgagtttcagtccgttatttttactcact
ggctgaaaaaatcctaccgggtctgtgaggaAGGGGTGTCGGGTGTAATT
GCATTGGGATTTGAATACATATTTGCGggacccgcgtggttttcacacaa
atgcTAGATAAATTTCTCGCGCACGAAACCTTTGAAAGTGTGCAATgcaa
aaatatacaaagaaaGTGATTGATTTAATTACCGGTCTGAAATATGAAGC
AAATCCTTAacattttttcttgcctgaaCATGGTTGAAGATTAGCTTCGG
GCTAtactttgcttgtttttataacCTCACTCGTCatacattttcatttt
aaagtaagcttagttttctttttcaaatttttagtattgatttttttgga
tttttgtcataacatttttgaattttttttttaaattctacaatagaaat
attttttcgcgATATTCAACAGGCGAAATTTGATAAATTAATCAAAGCCA
CTAAAATTTAAATAGACGAAGACTCTCGTCTGGCTATTGGGTTTAGGTAT
CGAAAAACCATTTTGCCGGCCTATTTTATAATTGTAAAATTCACAGGTTG
caaaagtctgaagacaaatcacgcttttactcgaaattttaagtggttgt
tacatgacatttatttcatttatatatatcagctgtaagttgtaaagcaa
gtaaaacatgggaataaaatcacgtgaactttttcgagtaatcacatgtt
ttgactgcattgatataattttgcaacccgtgtaaaGGAAAAACCGGAGA
CTTTGGATTTTATGGAAATGGAACAATATATTTTCACATTTAGTTGCGCC
TCATACAGTCAGGGataacttcaaattagcctacCATCTCGGAATATCAC
CTAATTAGCCTAGAATAAGCTCATAAtgaagaaaaacttgatttttgagc
caaatacTAATAGTCGCATCCTATAAATCCTCAGATTAATCTCTAATCAC
TCAATTAATGTATATTCCAAATATTACCTCTTAATCAGCTGCAGAATagg
agatattcaattttttctaacTGCGCATGCGCCGAACATGCGCAGTATAA
AAGCTTTGACATTTTTcgcggaaaatatttttttgcacacgTTACTaaga
tcagaaaattagcctataCATTTTTTCTGGGAGCTgaacacaaaagattt
ttaagtggAGAATGTTCTTTGAAACNATGCtataattttgaccatttttt
gcacgaaagggatcgaaaattttggggaaaatgcactctaagggtatgat
tttcactgatttttgctgcaccgtaagggtctaattttaaaagccaattt
tcggcccgcacataccgtcagtccgcaaacccagtgccccccggGATCTA
CTGCTAATTTCACTTCCATACGATTTGAAGCATCCCCACTGGAGTCTTat
cccaggggggggggcactccaggtaagtgatCTACGGAACGCGCGGCCCT
TAAGGGtttgttttttggactttggaaagtgcactgtaactgtaagggtg
taaaatttgagaaaataccaaattttgaggtaaaatttgagaaatttcaa
aaaatttcgaaaaattgcactataatagtcagaaaatctgccgtatacta
tcttcgctttctgatttgaattaTGGCGCTGCGATTTCCCCCCATCAGAG
AATtagtaaaggcaaaaagtagttgagctccagctcctggactagcacta
taagggtcgatttccagccaaatttttcctacACTGAAAGAGtggtccga
ttttagagacctgatttttggccgaacgtacgggttgttttcaaaatcga
gtgcccaGCCCCCGGGAGTCTTATCCCCTTTTTATAGTGCTGTGCGAATT
ATTCTTGGAATTTTACAAATCGAACGTTTTtcgaattcgaatgttttgaa
tttgtttttatttttgttgctgCATTGCAAATGTGagcatgaaaaattga
atgaaagaGTTGAAAATGTAATTCGAAATGTAATTCTGGATAGATATTCC
CTACGATTACAAATTTGAAGATTAGAGTGCAATGAAATTTAGAAATGCAG
AATTGATTTTGTTTATTACTTCTGCAGGGTTATCATAATCGATgcacaaa
atgatgaaataatgataaaaaagacgctgtttccaaaaaaaatagcGCGT
CTAAAAGGCGGAGACAGAAGAGCAAGCATGTTTGGGCTCTGTTTTACCAA
AGAGTTTTCTGNTtggcgctccaaagtcatagcttggaatacaacaacac
cgcgtgaacagaaatttagcgtctttagcgctccaaagtcatagcttgga
atacaacaaaaagcaaaaaacgaggaaaaggataattacaaggtctcaaa
agaaggttgtctattgctcattccgacattttaaattttccaggggtttt
gttgtttggaat Run BLAST on NCBI protein sequence of TCONS_00008769-protein >TCONS_00008769-protein ID=TCONS_00008769-protein|Name=TCONS_00008769-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
MMNSDIVEQEVHWFWTESFWLPPGRTWKDYESTDTLTKANFRDLYFIPIY
VIMLTCVRFLFERYIAKPFCVYLGIENKTFERNKLCELVYDTVTKYPKTK
EYEAIAKETGMTTSEVNSWFRRRRASSKNSKMNKATETCWRAFVYLLLFI
YGLLILAKSDWFMDHSTWLPGYINHPFTIELKVYYFAEISFYFSLLFSQF
YDTKRKDFLQQFIHHVVTLTLLLGSFLLSAYRFGAIIMFIHDTADFWLES
AKLTNYAKLQKVCDVLFGIFAILFFVTRLIYYPGWVAYAFFHYNNESKGI
VFNTLVCLCFVLLFLNFYWGFLVLKLAYKVLFSGKGASDTRSDTEDSSGS
ED Run BLAST on NCBI transcript from alignment at sc0000087:188575..194644- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008769 ID=TCONS_00008769|Name=TCONS_00008769|organism=Clytia hemisphaerica|type=transcript|length=6070bp|location=Sequence derived from alignment at sc0000087:188575..194644- (Clytia hemisphaerica)
AAAACTTTGAATTGATTGAGGGCTTACTAGCTGATGTCTCTTCAACATAA
ATATAGGTAGTCTTAAACGATTATCCTGTAGAATTTAGAAAAGCAGAGAA
ACGAGAGAGCTTCAAATTTCAAGACAATATGGTTTTCCATGTTTTGGGTT
TTGTATTCTATTGAAAAGTTCAATATTTAAAGTACGTAAAGTAAAAATGT
AATGAAAAGTTTTTTATGTCCTTTCACAGTGTTTTTGGAAGTTTTAAATT
ATATGTCATTTGCTTTACTATAGTAGCCATCAATTTGAACTGACTGGTTT
TCTATCACTAGCTCAACTTTTGTATGGAGGGTTATTGAACGTATTTTTTC
CTCTATAATTATTCCTGCTAAGGACTTGACTGAAAAAATTGTTTAAGAAA
CTTGGAAAGGATAGTTTATCACCAGAACTAGTTGTCAAAAAGCCTTTGCA
GCTAAAATTCACTCTTCAAAAAGTTTGAGTTTCAAATATTTTTGATAAAT
GAATGATGAAGTTTTTAGCTTGGGTCACTTTCAATGCACTTTCCGGGAAT
TACGAAATACGTCATTACATCACACTTTTTATCAACAAAAACATTGACTA
AACCTCTACTTTGTTTATGTTAAGATTGCAAGATATATCAATGGTTTTTA
TAAGAAAAGGACGTTCTTCTTTATCCATAAGATCAGCGGGCGAGTTTTCT
TAGGTGCCAAATAAACGGGGCCCCCCGCTTGTTAATTTTTCGAAAATTTT
CCAACCCCCACATTTTATTAGGACCCCCCCCCGTATACTGATTTAAAAAA
AATTTTCAGCTGTCAAAAGGGAAGGCCTCTCATTTTGCTCTAAATAGCCT
GATTTTAGCCTATATTTACCTTATTTTACCTTATTTTTGGGTTTTCAGAA
GTACAATTTCCAACTCCCCCGGCAATTAGGTCCCCCCGTTTATTGAAATC
TCAAAAATTTTCCAACCCCTAGTTTATTCCAACCCCCCGTTTATTTGGCA
CCTAAGAGTATTACATTACAAAAATAGAAGGCTATAATGCCTTACCTCAA
AACCCGACCAATACAAATGCTGTTCCAGTGTTGAAATTCTTTTGAGGAGT
TTACTCTTTGACCTCCTTAGAAACAGCTAGAAAAGTATCAAAAGCATCGA
TGTTCTTATAATGGCCTTATTTTGATACGGTTTACTTTCATGCAGAGGCA
TGGATGTAAAATTATTTCTTCGTTAGGTTGAAAACTAAAAAGTTTATTGT
GAAGTAGTCACACTTTTTTTATCAAACCTGAAGTGGATTTGTTCAATGCT
AGGTCGTTATTGTTGCTGTAATTCTGATCTCTAAGGCCTTTCATTTTATC
TGTAGTAAAAAAGATTCATTTTAAGTATCTTAAAATAGTTTTTCAACCTC
AACCAACATCAAGTGAAATTCTTAGATTTTTCGTTTGTTAAATCCGTCAC
GAAATTTTAGTTTGGGCTCAGTGGTGGTTTGTCGTGATGAGATAGATAGA
AAATTTACATCCAAATTGAACGTTCTCTTATAATAGTAATTCCAATCTTG
TTACCTTAACCCAAATAATCCACAGAACTTTGTCGTACTGACGATCGGGT
TTCGCTTATTTTTAAGATTTGAATTTTGAAGTCGATTGCGAATCTTCTAA
CTTCAGATTTCTCAGTTTTGTTTTCTTTTGATTTTTCAGGATTTAAATTG
TTTGTGAAGAAGAGAAGAACACGTTACTAGATTATAAATGATGAATTCTG
ACATTGTGGAACAAGAAGTCCATTGGTTTTGGACTGAAAGCTTTTGGTTA
CCTCCTGGAAGAACATGGAAAGATTATGAATCCACTGACACACTCACTAA
AGCAAATTTCCGAGATTTATACTTTATACCGATATATGTCATTATGTTGA
CGTGCGTCCGATTTCTATTCGAAAGATATATAGCAAAACCATTTTGTGTA
TATCTTGGAATTGAAAACAAGACCTTTGAACGCAATAAACTTTGTGAATT
GGTTTACGATACGGTCACTAAGTATCCAAAAACAAAGGAATATGAAGCCA
TTGCCAAGGAGACTGGCATGACCACAAGTGAAGTGAATTCTTGGTTTCGA
CGCCGCAGAGCAAGTTCTAAGAACTCCAAAATGAACAAAGCTACTGAGAC
CTGCTGGAGAGCCTTTGTTTACTTATTACTATTCATCTACGGGCTTTTAA
TACTGGCTAAAAGTGATTGGTTTATGGATCACTCCACTTGGCTACCAGGC
TATATCAATCATCCTTTTACAATCGAATTGAAAGTATACTATTTCGCTGA
GATCTCATTCTACTTTTCACTCCTTTTCTCGCAATTTTACGACACAAAAC
GTAAAGATTTCCTACAGCAGTTTATCCACCACGTAGTCACCCTCACACTT
TTACTGGGTTCGTTTCTCCTATCAGCATACCGTTTTGGAGCTATCATCAT
GTTTATACACGATACAGCAGACTTTTGGTTAGAATCTGCTAAACTAACAA
ATTACGCTAAACTACAAAAAGTTTGCGATGTGTTATTTGGTATTTTTGCC
ATCTTATTTTTTGTTACGAGACTCATTTATTACCCTGGATGGGTAGCATA
CGCATTCTTCCATTATAACAATGAAAGTAAAGGTATTGTTTTTAATACTT
TAGTTTGCCTCTGTTTCGTACTGTTATTCTTGAACTTTTATTGGGGATTT
TTGGTCTTGAAATTGGCATACAAAGTACTGTTTTCTGGTAAAGGAGCCTC
AGATACTAGAAGTGATACCGAAGATTCCAGTGGTAGTGAGGATTGATGGA
TATCATTTGTATTGAATGCTTAGAATTAAATGCGATGTTAGAAACTTTTT
TTTACTATAAATGATTATCATTATAGATGCTACAAACTTTGGAATTCTGG
TGTTTTGTGGTTAGTTTTTTTTTTAATTACTGGTCTTTTGTCCGGACAAT
CTGTAGAATCTGCCTCATTTTTTTAAGTTGAGGCACACAAACATTTTTAC
ATCTTTAACACTAGTTCAATGACTGTGGCGTAATAAAATGGGATGGAATT
TATTGTAGAGGTCACATTGGAGGCTCAACACCCCTTGATTCTTGAAGGGT
TTCTCGAAAACGCCTTGAATTTGACAACCGACTCCGCCGGAACTACTTTT
TAGAGTCAGACCTCTGGCTTCATTTTCTTCAACAACTTTCTCTTAGGCTA
AGAACCCAATTTTTCTACTATACAAAACGTTTTTGAATATGACTCACTAT
CAAGCTTGAATTGTAACACAGTAGTGTTCTTCCATCTTACGTTTTTTTTT
ATATTGCAAACTTATAATATATATCCAAGTTTGAATTTATACAACAGAAC
AAATTATATTCACGGCCTTTCACACAATCTTCCTCATAACACACAGATTA
GACACCTCCTTCTGACAGACCCGGTGGGGCCCCCTCCCACTGGAAGAATT
GGCCAAAATAACGTCCCCAGTGGATGATTTTACTCCAATTTTTGTCGCCG
TTGGAAAAATAAAAAAAGCAAATCCTCGCACTGCAAGATATCGATTTGAA
TATCCCTAGCTGAATTTTCTGACTTGAAAAAAATGGAATGCAAATCCCAA
GCCATAAAAAAAGATAAAAATTTCCCTATCGAGTTTCAGTCCGTTATTTT
TACTCACTGGCTGAAAAAATCCTACCGGGTCTGTGAGGAAGGGGTGTCGG
GTGTAATTGCATTGGGATTTGAATACATATTTGCGGGACCCGCGTGGTTT
TCACACAAATGCTAGATAAATTTCTCGCGCACGAAACCTTTGAAAGTGTG
CAATGCAAAAATATACAAAGAAAGTGATTGATTTAATTACCGGTCTGAAA
TATGAAGCAAATCCTTAACATTTTTTCTTGCCTGAACATGGTTGAAGATT
AGCTTCGGGCTATACTTTGCTTGTTTTTATAACCTCACTCGTCATACATT
TTCATTTTAAAGTAAGCTTAGTTTTCTTTTTCAAATTTTTAGTATTGATT
TTTTTGGATTTTTGTCATAACATTTTTGAATTTTTTTTTTAAATTCTACA
ATAGAAATATTTTTTCGCGATATTCAACAGGCGAAATTTGATAAATTAAT
CAAAGCCACTAAAATTTAAATAGACGAAGACTCTCGTCTGGCTATTGGGT
TTAGGTATCGAAAAACCATTTTGCCGGCCTATTTTATAATTGTAAAATTC
ACAGGTTGCAAAAGTCTGAAGACAAATCACGCTTTTACTCGAAATTTTAA
GTGGTTGTTACATGACATTTATTTCATTTATATATATCAGCTGTAAGTTG
TAAAGCAAGTAAAACATGGGAATAAAATCACGTGAACTTTTTCGAGTAAT
CACATGTTTTGACTGCATTGATATAATTTTGCAACCCGTGTAAAGGAAAA
ACCGGAGACTTTGGATTTTATGGAAATGGAACAATATATTTTCACATTTA
GTTGCGCCTCATACAGTCAGGGATAACTTCAAATTAGCCTACCATCTCGG
AATATCACCTAATTAGCCTAGAATAAGCTCATAATGAAGAAAAACTTGAT
TTTTGAGCCAAATACTAATAGTCGCATCCTATAAATCCTCAGATTAATCT
CTAATCACTCAATTAATGTATATTCCAAATATTACCTCTTAATCAGCTGC
AGAATAGGAGATATTCAATTTTTTCTAACTGCGCATGCGCCGAACATGCG
CAGTATAAAAGCTTTGACATTTTTCGCGGAAAATATTTTTTTGCACACGT
TACTAAGATCAGAAAATTAGCCTATACATTTTTTCTGGGAGCTGAACACA
AAAGATTTTTAAGTGGAGAATGTTCTTTGAAACNATGCTATAATTTTGAC
CATTTTTTGCACGAAAGGGATCGAAAATTTTGGGGAAAATGCACTCTAAG
GGTATGATTTTCACTGATTTTTGCTGCACCGTAAGGGTCTAATTTTAAAA
GCCAATTTTCGGCCCGCACATACCGTCAGTCCGCAAACCCAGTGCCCCCC
GGGATCTACTGCTAATTTCACTTCCATACGATTTGAAGCATCCCCACTGG
AGTCTTATCCCAGGGGGGGGGGCACTCCAGGTAAGTGATCTACGGAACGC
GCGGCCCTTAAGGGTTTGTTTTTTGGACTTTGGAAAGTGCACTGTAACTG
TAAGGGTGTAAAATTTGAGAAAATACCAAATTTTGAGGTAAAATTTGAGA
AATTTCAAAAAATTTCGAAAAATTGCACTATAATAGTCAGAAAATCTGCC
GTATACTATCTTCGCTTTCTGATTTGAATTATGGCGCTGCGATTTCCCCC
CATCAGAGAATTAGTAAAGGCAAAAAGTAGTTGAGCTCCAGCTCCTGGAC
TAGCACTATAAGGGTCGATTTCCAGCCAAATTTTTCCTACACTGAAAGAG
TGGTCCGATTTTAGAGACCTGATTTTTGGCCGAACGTACGGGTTGTTTTC
AAAATCGAGTGCCCAGCCCCCGGGAGTCTTATCCCCTTTTTATAGTGCTG
TGCGAATTATTCTTGGAATTTTACAAATCGAACGTTTTTCGAATTCGAAT
GTTTTGAATTTGTTTTTATTTTTGTTGCTGCATTGCAAATGTGAGCATGA
AAAATTGAATGAAAGAGTTGAAAATGTAATTCGAAATGTAATTCTGGATA
GATATTCCCTACGATTACAAATTTGAAGATTAGAGTGCAATGAAATTTAG
AAATGCAGAATTGATTTTGTTTATTACTTCTGCAGGGTTATCATAATCGA
TGCACAAAATGATGAAATAATGATAAAAAAGACGCTGTTTCCAAAAAAAA
TAGCGCGTCTAAAAGGCGGAGACAGAAGAGCAAGCATGTTTGGGCTCTGT
TTTACCAAAGAGTTTTCTGNTTGGCGCTCCAAAGTCATAGCTTGGAATAC
AACAACACCGCGTGAACAGAAATTTAGCGTCTTTAGCGCTCCAAAGTCAT
AGCTTGGAATACAACAAAAAGCAAAAAACGAGGAAAAGGATAATTACAAG
GTCTCAAAAGAAGGTTGTCTATTGCTCATTCCGACATTTTAAATTTTCCA
GGGGTTTTGTTGTTTGGAAT Coding sequence (CDS) from alignment at sc0000087:188575..194644- >TCONS_00008769 ID=TCONS_00008769|Name=TCONS_00008769|organism=Clytia hemisphaerica|type=CDS|length=1059bp|location=Sequence derived from alignment at sc0000087:188575..194644- (Clytia hemisphaerica)
ATGATGAATTCTGACATTGTGGAACAAGAAGTCCATTGGTTTTGGACTGA
AAGCTTTTGGTTACCTCCTGGAAGAACATGGAAAGATTATGAATCCACTG
ACACACTCACTAAAGCAAATTTCCGAGATTTATACTTTATACCGATATAT
GTCATTATGTTGACGTGCGTCCGATTTCTATTCGAAAGATATATAGCAAA
ACCATTTTGTGTATATCTTGGAATTGAAAACAAGACCTTTGAACGCAATA
AACTTTGTGAATTGGTTTACGATACGGTCACTAAGTATCCAAAAACAAAG
GAATATGAAGCCATTGCCAAGGAGACTGGCATGACCACAAGTGAAGTGAA
TTCTTGGTTTCGACGCCGCAGAGCAAGTTCTAAGAACTCCAAAATGAACA
AAGCTACTGAGACCTGCTGGAGAGCCTTTGTTTACTTATTACTATTCATC
TACGGGCTTTTAATACTGGCTAAAAGTGATTGGTTTATGGATCACTCCAC
TTGGCTACCAGGCTATATCAATCATCCTTTTACAATCGAATTGAAAGTAT
ACTATTTCGCTGAGATCTCATTCTACTTTTCACTCCTTTTCTCGCAATTT
TACGACACAAAACGTAAAGATTTCCTACAGCAGTTTATCCACCACGTAGT
CACCCTCACACTTTTACTGGGTTCGTTTCTCCTATCAGCATACCGTTTTG
GAGCTATCATCATGTTTATACACGATACAGCAGACTTTTGGTTAGAATCT
GCTAAACTAACAAATTACGCTAAACTACAAAAAGTTTGCGATGTGTTATT
TGGTATTTTTGCCATCTTATTTTTTGTTACGAGACTCATTTATTACCCTG
GATGGGTAGCATACGCATTCTTCCATTATAACAATGAAAGTAAAGGTATT
GTTTTTAATACTTTAGTTTGCCTCTGTTTCGTACTGTTATTCTTGAACTT
TTATTGGGGATTTTTGGTCTTGAAATTGGCATACAAAGTACTGTTTTCTG
GTAAAGGAGCCTCAGATACTAGAAGTGATACCGAAGATTCCAGTGGTAGT
GAGGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008769-exon-sc0000087-1575043694:194464..194644 | TCONS_00008769-exon-sc0000087-1575043694:194464..194644 | Clytia hemisphaerica | exon |
| TCONS_00008769-exon-sc0000087-1575043694:188575..192955 | TCONS_00008769-exon-sc0000087-1575043694:188575..192955 | Clytia hemisphaerica | exon |
| TCONS_00008769-exon-sc0000087-1510915933:194464..194644 | TCONS_00008769-exon-sc0000087-1510915933:194464..194644 | Clytia hemisphaerica | exon |
| TCONS_00008769-exon-sc0000087-1510915933:188575..192955 | TCONS_00008769-exon-sc0000087-1510915933:188575..192955 | Clytia hemisphaerica | exon |
| TCONS_00008769-exon-sc0000087-1491911889:194464..194644 | TCONS_00008769-exon-sc0000087-1491911889:194464..194644 | Clytia hemisphaerica | exon |
| TCONS_00008769-exon-sc0000087-1491911889:188575..192955 | TCONS_00008769-exon-sc0000087-1491911889:188575..192955 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087 | supercontig | sc0000087:188575..194644 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0005783 | endoplasmic reticulum |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005783 |
endoplasmic reticulum |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0003677 |
DNA binding |
Blast
BLAST of TCONS_00008769 vs. Swiss-Prot (Human)
Match: CERS6 (Ceramide synthase 6 OS=Homo sapiens GN=CERS6 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.163e-47 Identity = 125/331 (37.76%), Postives = 185/331 (55.89%), Query Frame = 2
Query: 266 WFWTESFWLPPGRTWKDYESTDTLTKANFRDLYFIPIYVIMLTCVRFLFERYIAKPFCVYLGIE---NKTFERNKLCELVYDTVTKYPKTKEYEAIAKETGMTTSEVNSWFRRRRASSKNSKMNKATETCWRAFVXXXXXXXXXXXXAKSDWFMDHSTWLPGYINHPFTIELKVYYFAEIXXXXXXXXXXXXDTKRKDFLQQFIHHVVXXXXXXXXXXXXAYRFGAIIMFIHDTADFWLESAKLTNYAKLQKVCDVLFGIFAILFFVTRLIYYPGWVAYAFFHYNNESKGI-----VFNTXXXXXXXXXXXNFYWGFLVLKLAYKVLFSGK 1234
WFW E FWLP TW D ++T+ T DLY + VR +FER++AKP + L I+ + N + E V+ +TK+P K E ++K+ + WFR+RR K S + + E+ WR YL +F YG+ L K+ W + Y P T +L YY E+SFY+SL+FSQF D KRKDF F+HH+V++ L+ S++ + R G +++ +HD+AD LE+AK+ NYAK QK+CD+LF +FA++F TRL +P WV + E G VFN L ++ LN +W +L++K+A K + GK
Sbjct: 7 WFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAIALNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKPSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILELSFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNL---LLLLVQGLNCFWSYLIVKIACKAVSRGK 334
The following BLAST results are available for this feature:
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