TCONS_00008296 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008296
Unique NameTCONS_00008296
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2873

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008296 ID=TCONS_00008296|Name=TCONS_00008296|organism=Clytia hemisphaerica|type=transcript|length=2873bp
GTCCTTTAGTTCCTAATTTAAACTTTTATTAAAGTGTCTTGGAAAGAAGT
TTTGGAATTTGCAAAAGGATAAATgacttctttttcatttgagttggaTT
TATGATTTCTAGATTTGATATTAAAGGAGCAAATAAAACATTTGTTACTG
GAGTaattatttttgtcaataaaaataATGAACAAAAAGAGAGCGAAAAA
GGTCCATTTTCACTCACCACGATTTGAAGGTTACCAAAATTTGGGCACCT
TAGAACAGGCATCGTCTATACCGAGCAATAGTCTACCTCACTTGAGTCGA
AGTGCAAGGTCACAGAAAACAAGTAAAGCTTCACTGTCGGTCAGTGGAAG
GAACATGTTGTCATCAAGCAAAAGTATTGACGTCTCAACCGTTGAAAATG
AATACATTCGAAACCTTCAACAACAAGTTTATTTCTTGGAGTTAGAATGT
GATTATTTACGTGGACAAGCTAACAGAGTGCAGGAAATACCCAATGATAT
CACCTTAGAAGCTGGCAAACTCGTCAAACGACTAAAGATAGCACAAAAAG
AAATTCGGGATCGCGATTCAGAGATTCTAAAGCGTGACGACAATATCAAT
TTACTGCAACATGAATGCGAAAATCTTACATCCAAGATATCGATACTTGA
AGATTCATTCGCAGCAGAGAAGAAAGAACTTATTAACGAAGTCGTCTCGC
TAAAGAAAGAACTCGAACGTAAAGAGCTCGATCAAGCTCGTAAAATCaat
gaaaacgaaaaaatcaaacttgactACGATACTACGATCGTAGACTTGAA
AGAATCGACAAGCAAGATCAACGTCACATTAGCACAACTTCACGAGAAAA
CAGACGAATATAACAAACTTCGCGTTCTATACGAAGAACAGCGCGCCGAA
TGCTTAAAAATACAGACTGAGTACCAAGAGCTCGAAGAACGATTCTTCAA
TTCCAAGGCTAAATCAATGGAAGATGTTGGACGCAGTCTAAAGGaagaaa
tgaagacattgcgTTTTGATCTTcgtgaaaaagaaatcaaagtggAACAA
GAAAGGACACTAAGACTAAAGATGTCGGATGATTGTGCCGCTTTGGTGAA
AGAAAATGCCACTCTGGCTTCACAATGCAGTGAGCTACAAAAACATCTCG
ACATTGAACGAGATTACAAACATGACAAATCATTACGTAATCAAACAAAT
ATTCAAGAACTCGTCACGTTGAAAGAAGAACGAAAACATTTGGAAAGGGA
TCTGGACCGAGCCAATCAGCTGTTAGAAATCGAAAAGAATAAATATACAA
GACTCCTTGATCGATTCACGAATGAAGAAGAAAGACATACCAGAGccaaa
ctacacaGTTCGAAGCTGAAAGCAGAGCTTGAAGAATTAGAAGGCTTGGA
AACagttggtacaaaagaaaatATCGCCTTACGACGTGATAAAGTTTTAA
TGAGTGATGAAATCGCCTCACTGCAATCAAAGTTGGAGGATAAGAACGAT
CACGTGAGAACCTTACAAAACAAATTATCCAATTTAAACGTCGCATATGA
TGAACTAGATCATAAACACAAAACAGAATTCAATCTCAATTCAATCCGTT
GGGATGAGTTTGAAAAAATGGCGGACCAGATGAAATCGTTCACTCGGTCC
ATGTCTCCTATTCGACAAAGTCTTTCCAATACTTCTCTGGGAAGAAGAAT
TCAGGAACTCGATCTAGATCAAGACACCTAACCTGCTGGACACTGGACTG
AAGATTTGTTAGGATTGTCGGATATGACCTATATCATCTCAACACTTCTT
TGGTTGCTAGTTGGAGCATTATATCAAGAAACTTAGCTTAGCCTGGATAC
TAGTTGAAGGCTTGTCTGTAAGCCTGTTGACCTTTATATCCTTCAATAAT
TGTTCATTTAAATctcttcaacttttttcatatttatattattttatgaa
aaactCAGGAACTGAAGCTGAATAAAGAAAGCTAGCTTAGACTCATTAGA
CTAGTTTAATAGTCTTATGTGTGGTAATATGAAATTATGTCAGACGTATG
CGTGATAAATTAGGGAAAGATTTTAGGTTCCATAGTTCATCGGGAAATCT
TTAATGTTTCGATACCTTatgtggataaattttcgcgtggattaattttc
gcggttttcgcgaattttggccatttttgcgaaatttaatccacgcgaaa
tctttaaatcctcgtctcgcgaaaattagtacacgcgaaaagttatccac
ttaaggtacgcTGGAGAGAAAGACTTCAaattaagaaaaagtttctgatt
gtacacctctgtgtcacagacccactgggatcccaggcccactggaaaat
ttggcaaaaatttcgtccccggtgggaaaatacactggaatttcagcccc
actgggaaattgactttgatttcatccccattcgattCCATGCTCAAAAG
TTTCACTACAAACCAATCCCACTGgatgtttcattttttaactttggaac
aatagagtttTTATacccattggaatttcaataggaatttttatccttac
tgaggaaaaaagttccaccgggcctgtgagacaggggtgtgattgTGTAG
ATATTTGAATTAACGAAGAAAAATCAATCCATCATTGATTAATTTattgt
attcaatttttaagTAGTGTGTAataaattgtaaatattatatcaagaat
attttttacctttaaaatatttgtttgaAAATAGTGAGTAGTTAGGACGT
GATTTCAGAATTTTATTGATGGCTTCACTTAAGTTAGTATGCCTAAGCCA
GACGGCTCAATTTTGGTCAGAACCTAAGATTAAACTTAAATTTAGattaa
ttgaaattaaaaacaatcTCAGC
Run BLAST on NCBI

transcript from alignment at sc0000084:603099..615399+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008296 ID=TCONS_00008296|Name=TCONS_00008296|organism=Clytia hemisphaerica|type=transcript|length=12301bp|location=Sequence derived from alignment at sc0000084:603099..615399+ (Clytia hemisphaerica)
GTCCTTTAGTTCCTAATTTAAACTTTTATTAAAGTGTCTTGGAAAGAAGT
TTTGGAATTTGCAAAAGGATAAATgacttctttttcatttgagttggaTT
TATGATTTCTAGATTTGATATTAAAGGAGCAAATAAAACATTTGTTACTG
GAGTaattatttttgtcaataaaaataATGAACAAAAAGAGAGCGAAAAA
GGTCCATTTTCACTCACCACGATTTGAAGGTTACCAAAATTTGGGCACCT
TAGAACAGGGTAAATTTTTGCTAATTAGGCAATATATAACATAATAAGCC
TTAACTTGTGAACGAGCATAAATTAGTAATAATACATGATTATGGATTTA
TACATGATTATGGAtttaaataaatattaaaaatagatattctGTATATC
TTTTTCTTCTGTCTTTCTTCTTTTGGTGTCGTTCCAATCTCAGAGCATTT
TAAACTTTCACAAACAGCTTGAATCTTTGACCGCCATAATGGGCGATCCA
TTGCAATAACAGTCCAATCGAGTAAATTGATTTTCTTAGGCAAATAGTGC
CCGTTTTAATATTATATTATGATGCTGTTGTttagagtttttcttttttt
ttgagcaATTCCAAATANCATATTATGATGCTGTTGTTTAGAGTCTAGTG
TTTTTGAGCAATTCCAAATATACACCTGTTTTTAAACCTAAAAGCTAAGA
GATGATTTGATGATCATGTTAATAGTAGGGTTGAGTGGCGTAAAATATTA
CATCTTTGATGGTCTAAATCTTTAACCTGCACATTCTTTTCATAGTCCTG
AGTAAATCCTCCAATTTTTTTGTCTACGTAACTACTTTCAAGTTTTCAAG
TCAAGATATGACAATTTGAAATCTCTGAAAGTGagttcttacaatgttct
tacgtcaaaattccattgttttcttgctaaaagtaaaaatattgacTTTC
AGCTATTTATCATGCATAAACCATGCCTTGGCCACTCTTGATAAAGTTTA
CTCCCTCCTTCTTTCCCTGGTAAAGGGCTTGGAAATTTCCCAATTGAACG
GGATTGATATTTTAACTAGCTTTTACTCAAGATAATTAGATAATTCTGCA
ATTTGAGGGGTTTGTAAAAGGTTGGATAAAAACCTCTTCCACCTGGGCTA
CTAAATATTTTCCTTCATTTAGATCGTAAAACTCCTACTTACCGGTCTAT
GTATAGGCTACTCCTGCGtctaaaaaagttgattttaccTTGGTTTTCAT
TTCAGCATCGTCTATACCGAGCAATAGTCTACCTCACTTGAGTCGAAGTG
CAAGGTCACAGAAAACAAGTAAAGCTTCACTGTCGGTCAGTGGAAGGAAC
ATGTTGTCATCAAGCAAAAGGtatgattttttatgatttttactGCTGCA
TTATAAGTTTGGCTGGGTGGGATATTTTTGAGTAGCCGCCGTTCGAATTG
AGAGACGGCGACAAATTGAAGAAAAGTCGGGACTTCTAATCTTTGTAGGA
AATAATTCATTTTGTTATGTCGATCATCGACTTTCTAcagttttttgtcg
aaaataaagaaaaaattcaaccgTGTCAAGTAGAGTCATGGGAGATTAGA
CTAATAGTAATAATCTTTTCCGACGCACGATAACATGATAACAATAATTC
TCCTTCCCATTGTTTTTGGTATAGCTGACTTCAATAAGATCGAAAAAGGT
GTGCCTAGCAGTAAATCCCAGATACAATTCTAGTCACATTTTAAGCATTT
ATAAGTTAGAATTTTCTGTTCTAGTATTGACGTCTCAACCGTTGAAAATG
AATACATTCGAAACCTTCAANGTATTTTAGTATTGACGTCTCAACCGTTG
AAAATGAATACATTCGAAACCTTCAACAACAAGTTTATTTCTTGGAGTTA
GAATGTGATTATTTACGTGGACAAGCTAACAGAGTGCAGGAAATACCCAA
TGATATCACCTTAGAAGCTGGCAAACTCGTCAAACGACTAAAGGTATATT
ACTTAGGAGATAAGTATGTTATAGTTGTGAGACTATGTAGATGATTTTTA
CTCTtgatattctttttatttttaatatacacttttttataaaaacacga
agctgaaaataaagtaaagtaaagaaactaagcgtataaagaacatcgta
agaacacttttaagcgaccgtagtgcagtgctATAGCACATCCGACTACG
GTGCgaaaggttgtgggttcaacccaatgaagtagaagccgaaggctaga
agtcaatctctttggtaggatttaaagccaacaaatcctaccaaagttgc
gcggccttgagcggttcgcctggtttttacacaaatgacagactgaaact
aaaatttaccgctaaatttcaaaaaaaatatcaatcgtaaacaaaggaat
ttctagattcaatctgtcgtcaaaaatacggcgcattttttaaggcttca
ctttttcttgcctgagaaaggtcagagattgaactctagcccttcgggct
ttaaactcaatggttcaaCCTCTAGATGGGTCATAcaaaagattcccaaa
atggtgcctctctgcttgatgaaGAGcgaagagaaggatcaagggtaagt
gaagcaatccagggagaaaaaaGTGGCGCCCtaccctaccttcgggtaga
tagctgtcgcctccgactgcgctcgcagacttacttacgtAAGAACATct
aagcctgaaaatttcaaaaagataagaacagccaagcctgagccaaaatt
taccggttcttataaaaaaaagcgtgtactttttaaactttcttctTACT
TTCATTCAGATAGCACAAAAAGAAATTCGGGATCGCGATTCAGAGATTCT
AAAGCGTGACGACAATATCAATTTACTGCAACATGAATGCGAAAATCTTA
CATCCAAGATATCGATACTTGAAGGTAACCTTCCTTTGTTTTAACAATGT
CCCTCATTTTGACTTTCAAATGGAATGTGGATGGGACACCATGAACTCAT
TGACAGAATTTACTCTCAAGTGCCTAATAGTTCCCCTGCCGCTTTTTAAT
TCTTGACACCCTCTCTCATTATTCCGACCACCCTGTTTATGTTTAGGCAA
CTGAGGGTATAAAAAATGTAGCTTTCGGGTTCAAAAATTTGTGCCGGTTT
TACCAAGGAGAATGTAATAAATTGTAAAATAGTTCTTGGTGCTGAATTGA
AGAGAAGTGAGAAGTGTTCTTTAGATAGCTTACAAATGAAAGCTTTCTAG
CTGATTTCAACACGGTTGCATTTGCCTGCTGAAAACTTTATCTTATTTGA
GTTTTCTAAAGTAGATTTTTCTTTACCATAACATTTAAGAGGGATTTCGA
TAGCCTAGGCTGCTCTCTTGTGATGGGGGGAAAGTAGGGAGGCAAGTATA
ACTGATTGATATCAGATTTCTTCACTTAGAGTGACCAGAGATGGAAAAGT
TCACCCTTCCCATGTAGTCAAGATGTCAAGATTAGACCTAGGCTAACTTA
GCATGTTTTATTTTCTTACAGATTCATTCGCAGCAGAGAAGAAAGAACTT
ATTAACGAAGTCGTCTCGCTAAAGAAAGAACTCGAACGTAAAGAGCTCGA
TCAAGCTCGTAAAATCaatgaaaacgaaaaaatcaaacttgactACGATA
CTACGATCGTAGACTTGAAAGAATCGACAAGCAAGATCAACGTCACATTA
GCACAAGTAAGTCTTACATGAATTTTTTATACTAGACTTCGAATCAGTGT
TTTCAGTACGAGTTGTACTTTCtgtagaagttttttttgctataagaaca
aattatgtaagtaaggtTTTgctgtcaaaaaataagaacatttcaagacc
ATTTTAAAACTATAGAACGATTCATTTTCTTGAGAAGTTGTTGCAAGGaa
ctaaaaatagaaacttCTTAGAAAGAACATCCGTCATCTCTTGCTCATCA
CCAGGAAACTTGAGGATGGAAGTAAGGTCTAGTTGAAATATATAATTtag
taaaaatctttaaatttaacCACCCAGCCATTAGAATGATTTGAagcgct
tatcaaataaaagttaaaccacGATTTAACCTTTGTTAAATCCAAAGACA
CAGTAAAATGGGTTTCGGATTTATTATGTGACCGAAAAAGAGGCTCAAAA
AGGTTCAGATTCTGTACTTATTTTTAATCGTTCATCTCCTTATTTTCTGA
TAGCTTCACGAGAAAACAGACGAATATAACAAACTTCGCGTTCTATACGA
AGAACAGCGCGCCGAATGCTTAAAAATACAGACTGAGTACCAAGAGCTCG
AAGAACGATTCTTCAATTCCAAGGCTAAATCAATGGAAGATGTTGGACGC
AGTCTAAAGgtaagattttgtttttttcgtgATGGAATATTATGGGAGTG
TGAATCTTCGGTAGAAATGATTTTAAGTTGAAACTTTACTCAagcaaaaa
acaaataaagCGCTAGAtatattcatagaattatatttcacaggtctatc
gacctctacgaaataattttagatttatgaaatattgtctaattcttcat
ctgtcgtccagtcgtcagaagatattgacagagaagacgttgttttggtc
tttgtcctagaTTTTATTCATTTGATGCCGCTAAAATCTTTTGGAAAAGT
TAGAGAGTCCTCTTTAGCCAATCATTCTGTTCTTCTACATAAATTTAGTA
TATTACCTCCTCATTAACCTCTTTGTTCTTTATACACAGGaagaaatgaa
gacattgcgTTTTGATCTTcgtgaaaaagaaatcaaagtggAACAAGAAA
GGACACTAAGACTAAAGGTAACTCAAGTCTTGGAGAGTGTTATGATATCA
TTTATACAAGTTCTCCCAAAAGGTGAATGGCTCCTACTCCTTACTACGAA
GTAGATATTCCACCTTCATTCAAATAGGAACGCGGCACACAGTTACCATG
CTGCATTGTGATGAAACTTGAACAACGCGGGAAAGAAGAGCTCGTTGTGA
GTGTAGAAGGGTATAAGTATTATCAACCATAATCAATCAACCATTTCAGT
TATGATGACTGGCAtatcacccacactcttgtattaGAGTTACGGTACCC
ATCTCCCCATTTACCAAGTGAACCGTAGTATCACACTGGGAATCGAACCT
CCTAACACAAttaccactataccacaacaAGACTGTAATTTCTAagttct
ttttgaaaataagcaGTGGTAGAATTTGTGACAAACGATTGTAATTACCC
TTCACTCTTCATTGCTGCTTTAAAATCTGCCCGAACATTTCCACCCTTGG
CGGCATTAGCTCCCAAATTTACACTCTTTTCAGGGCCTTAGTCTAGACAA
TAGGATCGTTTAAATTTGATTAGGAAATTCACAAAATCCCATAAAACCAA
CTTAGAGGTATAGATGGAGAATCTCTTGAAAGGACACTTTTTGATATTGG
AACTCTTCCATTTCAGATGTCGGATGATTGTGCCGCTTTGGTGAAAGAAA
ATGCCACTCTGGCTTCACAATGCAGTGAGCTACAAAAACATCTCGACATT
GTAAGTTGGATTTGTCTCCAGTAcactactcttaggttccaaataaattg
GAGttggttcgaataaacggggggggggggNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAGCAAAATaagggccttctctttgacagc
tgaaaatattcttaaaaattaataaacggggggggtcctaataaggtccg
gggggttggaaaattttcgcaaaattaaCAACTgcggggggcgtttattt
gaaacctAAGAATATTCGTTTTTTAATTGGGAGATCGTGGAAAGccaaac
atttttttccaaaaagataTTATCCTATTTGCCCTCTCTTTTCAAGTAAT
ATCCCAGCTACCCTCTATCCTCAAGTAAACTAATCAATGTTCTTCAAACC
AAAATGTCTTGATAATCCCGATCCCAAATACTTCGACAATTTAAaggtca
ttcattcattcattaatCGCCATAGGAACGAGATTACAAACATGACAAAT
CATTACGTAATCAAACAAATATTCAAGAACTCGTCACGTTGAAAGAAGAA
CGAAAACATTTGGAAAGGGATCTGGACCGAGCCAATCAGCTGTTAGAAAT
CGAAAAGAATAAATATACAAGACTCCTTGATCGAGTAAGTTAACTGACCG
TCATATTAGCACCCTGTTATAAGAATAATTTGTGATGGTGACATTATAGT
GACCAAAAAAAGCCTGTTGTGAAGAacaataagaaaaatgaaaataatgt
cAAAAAGGCTGGAATCGTTTATAATCCATGTAATACATGTTATATGATAG
TATGATAGTAGTAatgggataatatcagtttgtacAGCAATTTGTccctt
caaatttttttcacatattTTCCGCTTTTTCTGAATTAGCCATTTATCCA
TGCTAGACTAAATGCTCAGGCAAAGCACATTTTTGTTAAGTTTTCATCTT
TCAGGAGCGTATTTTATTTTCGAATATCGTCGTTGAATACTTTAGTTATT
TTTTACTACACGATCAGTAGAAATCAGTTTAGGCTCAGTTTAGTTTTTCT
TGTGGGGTTTATTTAAAAAGGTCACTTCCTCTTTTACACAACGGAAGTTG
AAGGAAGAATTATACTTAAAAGTTTTCATCTCCCATAGTTCACGAATGAA
GAAGAAAGACATACCAGAGGTTAGTTGGGATATTCATTCATTCACCGCGT
GTCCGAATTGTCCGAAAAAGGGATAGTTTTCCTTTTCTCCCaacttcttt
cattttcttaaaggttttagtCAAAATTCGGATGTGGAATTTTTCGCGGG
AACGGGTAGACCTcgtgaaaattgtgaaaattaatccacctAAGGAAGTT
CTATTGTTTTTCCGTAATAAAAAATTCCAATCGCATTTTGCAAATAATGA
AATAGGGAGGGTGACACTCAACTGCATGTGCTTGGTTCAAAAGTAGATAG
GAGAGGGGGCCCGCGGATTAGGCttggcaaaagtttttatggtcGAAAAA
CTGATGTTTTAGGCAAAATTCCTAACACCCAAAATAGACGAatatttgac
aaattttcaaaaatgaattaaaagaaaattatcaTTACCAACGAATAGAG
CAtcaaattttgagcaaaaaagtatactacaacatctacgggaccttgaa
aaccctTGAAATTGGACTaagcaaccttgaaaaccttgaaagtgAATGTA
ATGGGAAAGAATTCcttgaaaaccttaaaaatgcATGATTGTGGCAGTAT
AGTTGTCTTGTTTTGGCTTGGGTCCTTACTGAAGTTTTGGTCTACGCTAA
AGTTCCAAAAAATTTCTTGCTCGCTTTCCTCGCAATCATTGTTTCTGGAC
CAAATAATGGTAGTAACCTCCATGCACCTTGTCGACACAGTCATATCCTA
CTACtattttaagtcaattttagttctgaaaaccttgaaaatacccaata
aatggtccaaaaaaacttgaaaaacactaaaattttgccaaaaaaacctt
gaaaatgggGAAAAAAATTCCGTAGACACCTTGCAAGTCTTATACTcaaa
aatgtaaagaaatacatgctttcaaagttcaaaattcTGTCAGATGGAgt
acgattgacgtcaaattttgtctaaaatgtAACGGATTCCACAggatttt
aaactttaaaattgtcatcatcatcatcattgctcgaccgcagtcgagac
aaTGGATTCCACTCGCTGGCGCCAGGAGTCGCGGTTGCGCATAGCAGTGC
CCAGGTCGCTAAGATCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCTCTAGGTAGGCCTCGTCAAGTTTAATCTTGGCAGAGTTAAGTTGC
TCCTTGCGTCTCCGCGTTGGTGCTGCATTATACAAAGAGGAAGCTTTTGT
TAGATTTGGATTTTTCCAATAAATTGTCATATTTTAGTGTGTTTGAGTAT
AAGACTTGttgtagtatacttttttgctcagaatttcatccTTCATCCGA
TGATAATCATTTGTGTTGTTCgacaaaaaattgtcaattttttactcatt
ttgggGGTTAGGAGTTTTTCCTACAACGTTAAATTTTTGGCCATGGCCTA
ATTCGCGGGCCCCCTCTCAAAGTTTCAAAATCCTATCTACTTTCGAACCA
CGAAAGAAGTTATAGAACCTAAGGattgcccccccccctactATCATACC
TTTCAATTTtgttatttcagccaaactacacaGTTCGAAGCTGAAAGCAG
AGCTTGAAGAATTAGAAGGCTTGGAAACagttggtacaaaagaaaatATC
GCCTTACGACGTGATAAAGTTTTAATGAGTGATGAAATCGCCTCACTGCA
ATCAAAGGTATGGATTAAGTTTGACGTTCTTCTTCTAAAGTTCGTGCTAT
GAGGGGGCAGTAGATACTACACCTCGACATATCGCTTTCTACCATAAACA
ATTCTTGGTTCAGGGGAAACCAACCGGGTcaactattttctttttcttca
agttATACccagaaacaaaatttttatcCTAGCCTAAACTTTCCGAATAG
GTCGACAATTACCTAAAAATCAACCATAAGTTTCCTAGCTTGATGAGTGT
TCCGGAAAAATCACTTCTCGATTAGATTCAAGGGAAATATTCTCACAAAG
TTCGCGCTAAAGTTAGACTAGAAAACCAcctcgttgtatttcgctgcagc
ttACGCTTGCAATGGGCTCACTACGTACGCTGAATAAACCACTTTACCAC
GGCAATttctatattttataagaactcgttataagcactattcccgcgtt
cctgtgtccaaggaaagacaaacgcttgctagtctactctcgggtaccta
atagccgtccccccccgcttattaatttttggaaaaatgtttttaaaagt
tccctcttttgtcctaattcagctgtattagcctccttttcaaaaatttt
ccacccgggacatttttattccaaccccccccccccccgctcNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNcccccccccccctgcttattccaaacccccc
ggctattaggtacccgagagtaagcaAAAGTTGGTTCTGCGGATAAAAAA
AGTTTCCGCGAAAGTTAGTTTTCTTACGGTATTCATTGACCATTCGCTTT
GTCTCAACAGTTGGAGGATAAGAACGATCACGTGAGAACCTTACAAAACA
AATTATCCAATTTAAACGTCGCATATGATGAACTAGATCATAAACACAAA
ACAGAATTCAATCTCAATTCAATCCGTTGGGATGAGTTTGAAAAAATGGC
GGACCAGATGAAATCGTTCACTCGGTCCATGTCTCCTATTCGACAAAGTC
TTTCCAATACTTCTCTGGGAAGAAGAATTCAGGAACTCGATCTAGATCAA
GACACCTAACCTGCTGGACACTGGACTGAAGATTTGTTAGGATTGTCGGA
TATGACCTATATCATCTCAACACTTCTTTGGTTGCTAGTTGGAGCATTAT
ATCAAGAAACTTAGCTTAGCCTGGATACTAGTTGAAGGCTTGTCTGTAAG
CCTGTTGACCTTTATATCCTTCAATAATTGTTCATTTAAATctcttcaac
ttttttcatatttatattattttatgaaaaactCAGGAACTGAAGCTGAA
TAAAGAAAGCTAGCTTAGACTCATTAGACTAGTTTAATAGTCTTATGTGT
GGTAATATGAAATTATGTCAGACGTATGCGTGATAAATTAGGGAAAGATT
TTAGGTTCCATAGTTCATCGGGAAATCTTTAATGTTTCGATACCTTatgt
ggataaattttcgcgtggattaattttcgcggttttcgcgaattttggcc
atttttgcgaaatttaatccacgcgaaatctttaaatcctcgtctcgcga
aaattagtacacgcgaaaagttatccacttaaggtacgcTGGAGAGAAAG
ACTTCAaattaagaaaaagtttctgattgtacacctctgtgtcacagacc
cactgggatcccaggcccactggaaaatttggcaaaaatttcgtccccgg
tgggaaaatacactggaatttcagccccactgggaaattgactttgattt
catccccattcgattCCATGCTCAAAAGTTTCACTACAAACCAATCCCAC
TGgatgtttcattttttaactttggaacaatagagtttTTATacccattg
gaatttcaataggaatttttatccttactgaggaaaaaagttccaccggg
cctgtgagacaggggtgtgattgTGTAGATATTTGAATTAACGAAGAAAA
ATCAATCCATCATTGATTAATTTattgtattcaatttttaagTAGTGTGT
Aataaattgtaaatattatatcaagaatattttttacctttaaaatattt
gtttgaAAATAGTGAGTAGTTAGGACGTGATTTCAGAATTTTATTGATGG
CTTCACTTAAGTTAGTATGCCTAAGCCAGACGGCTCAATTTTGGTCAGAA
CCTAAGATTAAACTTAAATTTAGattaattgaaattaaaaacaatcTCAG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004660XLOC_004660Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008296-exon-sc0000084-1491911889:603099..603357TCONS_00008296-exon-sc0000084-1491911889:603099..603357Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:603099..603357TCONS_00008296-exon-sc0000084-1510915933:603099..603357Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:603099..603357TCONS_00008296-exon-sc0000084-1575043694:603099..603357Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:604354..604468TCONS_00008296-exon-sc0000084-1491911889:604354..604468Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:604354..604468TCONS_00008296-exon-sc0000084-1510915933:604354..604468Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:604354..604468TCONS_00008296-exon-sc0000084-1575043694:604354..604468Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:604929..605091TCONS_00008296-exon-sc0000084-1491911889:604929..605091Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:604929..605091TCONS_00008296-exon-sc0000084-1510915933:604929..605091Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:604929..605091TCONS_00008296-exon-sc0000084-1575043694:604929..605091Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:605908..606022TCONS_00008296-exon-sc0000084-1491911889:605908..606022Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:605908..606022TCONS_00008296-exon-sc0000084-1510915933:605908..606022Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:605908..606022TCONS_00008296-exon-sc0000084-1575043694:605908..606022Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:606620..606804TCONS_00008296-exon-sc0000084-1491911889:606620..606804Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:606620..606804TCONS_00008296-exon-sc0000084-1510915933:606620..606804Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:606620..606804TCONS_00008296-exon-sc0000084-1575043694:606620..606804Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:607302..607457TCONS_00008296-exon-sc0000084-1491911889:607302..607457Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:607302..607457TCONS_00008296-exon-sc0000084-1510915933:607302..607457Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:607302..607457TCONS_00008296-exon-sc0000084-1575043694:607302..607457Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:607838..607915TCONS_00008296-exon-sc0000084-1491911889:607838..607915Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:607838..607915TCONS_00008296-exon-sc0000084-1510915933:607838..607915Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:607838..607915TCONS_00008296-exon-sc0000084-1575043694:607838..607915Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:608565..608648TCONS_00008296-exon-sc0000084-1491911889:608565..608648Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:608565..608648TCONS_00008296-exon-sc0000084-1510915933:608565..608648Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:608565..608648TCONS_00008296-exon-sc0000084-1575043694:608565..608648Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:609274..609432TCONS_00008296-exon-sc0000084-1491911889:609274..609432Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:609274..609432TCONS_00008296-exon-sc0000084-1510915933:609274..609432Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:609274..609432TCONS_00008296-exon-sc0000084-1575043694:609274..609432Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:609937..609967TCONS_00008296-exon-sc0000084-1491911889:609937..609967Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:609937..609967TCONS_00008296-exon-sc0000084-1510915933:609937..609967Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:609937..609967TCONS_00008296-exon-sc0000084-1575043694:609937..609967Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:612669..612805TCONS_00008296-exon-sc0000084-1491911889:612669..612805Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:612669..612805TCONS_00008296-exon-sc0000084-1510915933:612669..612805Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:612669..612805TCONS_00008296-exon-sc0000084-1575043694:612669..612805Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1491911889:614009..615399TCONS_00008296-exon-sc0000084-1491911889:614009..615399Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1510915933:614009..615399TCONS_00008296-exon-sc0000084-1510915933:614009..615399Clytia hemisphaericaexon
TCONS_00008296-exon-sc0000084-1575043694:614009..615399TCONS_00008296-exon-sc0000084-1575043694:614009..615399Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:603099..615399 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.160226	0	0.922072	0	1.01676	0.157481	0.903208	0	0.863146	0.575491	0.89648	0.245678	0.374963	0	0.189366	0	0	0.141169	0	0	0	0.929	1.65561	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008296 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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