TCONS_00008284 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008284
Unique NameTCONS_00008284
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4763

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008284 ID=TCONS_00008284|Name=TCONS_00008284|organism=Clytia hemisphaerica|type=transcript|length=4763bp
ggttATTATTTGTCTTTCTACGGATCAAATTTCAAACATCCTTTATCGTA
TAGAATTATAAGATGATAAATATTGCACTTTCTGAGTGTATGTAGAGCAG
ATAAAATGTGTACTGTATtatctttttacgtgtttttgaTTTTCACATTT
TGTTTCGAAGTATCTCGTGGAATCGAGCAAAGAACTATTCATGTGTCACG
TGACAAGAGGAGCAAAGACACGATCAATTGCGGTTCAATTCATCAACCAT
GCTTTCATTTAAATCACGCTATTAACATTTCACTGGATGGAGATATCATT
TTACTGGATTCACAATATCAATACGTTCGCAATGAAACTATTGTGATACC
TCATTCTTTGGAAATATCAAGCTATTGTGGTAATATTAGTCTAAACTGTA
GTGGAGAAATGGCTAAGGTATTGTTCGAGAGCGATTGTGCGTTATTTTCA
CCATCAGGGAATGTATCTCTACAAGACCTCTCAATTGGATTTCGTTTACT
TAACATTTCTCATCTATTGTCATTTCATATTTCCCAAATAAAACCATCGA
AAGGATCACACGAGGAGCTAGTACCAGAAAGACCAACTGTAATGAAGGTG
TTGATGCAAGATTGTCATTTCCATAACTTTTGGATAGAAATAAGAAACCA
AGAATATATTAAAGGGATAATATCCTTAAAAGGTAATCAATTCATGAACT
CAGATTTGCACTTGTATTcatttgatcaaattttaacAAGTGACAATAAG
TTTTTGGAATCCAACCTTCAAATGAACACTAGAAGTACCAAATATTTCAG
TAAATTTATACCCTACACCATGACCGATGACATAGTCCAAGACTCGTTGT
TTCAGTATTTCATTAATCGACCAGGAGTTATTTTCACCATATTAAGGACC
GACTTCACACGATCGAGTTTTAGCCTATCAAGCAGTAAAAGTGGCTTGGT
GAAAGTCTCAATTTTGAAATGCACTTTTGATCAATCTTATCGTGATAGAA
TTAGTAGCCAAGTTTCTATGGATATAAATGACTTTTCATTACATCANTGA
TTCGATCGAATCTCAAGTAGTAACAATACATTTCTAAAACAAACATCCCT
TGAGATGGACGCAAGAAATATCCATTATTTTGGAAAACCTATAGACTACA
AAATAACCGACAACGCATTTTCATCAGATTCGTTTTTAACGATTAGGGTG
AAACAACCAGGAAATTTTGTCATATCAAGGACAAGCTTTGAACGTTCGAA
TTTATTCGTATTTACTACAACGTgtcattttgtaaaaatatcaaTCTCGA
AATGCACTTTTGATTCTGTCGGTACATACTTAAATCAAATACAAGTGACT
AATGTTTACGATAGTGGCAAAAACGAACTTTTAGTTAACGATTCttcatt
caaaagttcaaagtCGGGTTCGATTTACTCTGAAGGGTACAGGGTTGCAA
TATTGAATTCAACATTTCTTGACAATTACTTCTGTGATAAAGATATCGTT
ATACCTTTCAGCTATGATATGTCAGCTGGTATTACGATCAAGTCAGAACA
TATAACCATTTACAATTGTACTTTTCTAAACAATACTACTCCTTATACAG
TGATGCCAACCTCCATATATTTAACACTAAAAGGCGTCAGTAATCGATTT
TTAAACATCACAAAAGTACAATTGTGTGACGGTGGAACGAATGAAAAAAG
GTCCAGTACAGCTTTTttcgttaaaaatattttcgatgTAGATACTGTTT
TTATTACAGACTCAAATTTCTCATGCTTAGAATCTAACTATTATATTCTT
GGTGACTGGTCGAATTCACACTTTCAAAATAACATTCGAATGAAGTTTGT
CCAATGTGACGGAACATCGTACCACGCTCTAAATAAACCATACGCCAATT
ACGATAGCAATGGAAAAATACATGTTCATAATTCAACATGTTATCAATGT
CCCTTTCAAGCTTCTTGTATTAACGGTATCAAAAGTAGAGGAAACTATTG
GGGTTACTCAAACTCCTCTGGATATGTGACATTTAAGATATGTCCACCCT
TTTATTGTTGTGATCGTTTAAAAAGATGTCATTCGTATAACACATGTGCA
AACAGGCGTCAAGGGCGGTTGTGTGGAGGGTGTAGACCTGGAGACTTTAT
AAGCATATTTAGTCATAACAAATGTGTTGATAGTTCAAAATGCTTGGCGA
GTtggttttggtttgtttttacaATTGTTATCGTATTATCTTTCGGATTG
TTACTATACCACAAAGATGTACTTCTCGCTATTAAAAACAAACTACATAA
ACTCTATGCGAGATTGACCAGGATTGATCGTGGAGATTCTGTTCGAAATA
GATTCCCGGATACTCCTTATAACTTGATCAGCGACAACGAAGTGAATGAG
ACAAACTCACACAACAATCTTAACTTTGATCAGCAATCATATATTTCAGG
TCTTATCAAAATCACATTTTTCTTTTACCAGACAGCTTCAATTATACGAA
TCACTTCTTCAGCTAAAATGGAATATCACATGCCATATCTTATTGAAACT
CTTTCATCATTTTTCGACATTAAAATCTCAATCAAATCTTCCAATCTGAT
CGATTTGTGCCCTATCCAAACAGAGTATTGCTGCTATTGAACTTTTCAGA
TTAAGTATCGTTCTTTCGTGTATTATTCTAATACCAGTATCACTTCTCGT
GGTCAACCTTGTCAGATACCACCAGGAAAACCAATATAAAATCTCGTCAT
TCATCAACCGGTTGAAAGTTAGCTATGTTCAGATTCTAATTCTTGGTTAT
GCTAGCATTGCAACATTTTGTTTACAATCTGTAGATTGTATTGAAATTGA
CGGTGGACTGTGGATTTTTAATCAAGCTGAAGTGGCGTGTTACCAACAAT
GGCAGATCATGGTTTTTGTGGTGATTTGTTTTTGGATTGTTCCCTTTCCT
TTTGTATTATATTTTGGTTGCTGTTGGCTTCGATCAAAAGCAATCACACC
AAATGAAATGTTGCTGACCCTTACATTTCCACCAGTAGTACTGTTTTACA
AAACAAGAAACTGGTACCTTGGTCAATCTCAGAATGTATGGTCAGAGAAA
ATGACCATAGAACAGAGTGATATTGTAAGCTTCATGAATCAACCTTTTCG
AGTGAGTATAAACAAAGATGAAACGTCTGAACAAATAATATGCAAGCCAg
ttaaaattgtttgggagccGGTGTTTGTCGCACGTCGATTGATCCTTATC
ATTAGTACCACGTTCATCCGGTCACCGACCAAAATTATACCCAACTGGAT
TTCTGTTGATTATATTCAGTATCCATGATTACACAGTCAAACCTTTTGTC
GAAAAGTCGCTCAATTTCATACAATTAATGTCAATGTCGTTATTAATAAC
TCTAGCGTTTGTAAACACATTCTGGGCGTGGTCAATCAATATTGACATTG
TAGATAATGCAGAGTATTATTTGACCggtaaaattcttttgtttattgaA
TTAGTAATCTTACTTTCACCTATCATTTTCGTTATTGTAGCTTTATTTTA
TAGACTGTTTAATTATATATACAAGTTATTTTTGCGAAAATTAGATTAGG
GGTTTTTTGTAGGTTCTTATAACACGTTGATAAACTAAAcatttttggtt
gatttttcttttggaGGACTTGTATTTTGTTAAATTGGATTTTTCCGGTT
CTTCTTGATCTTATTTACATTCCATGTAGCcatttgtttttaaactttct
taACTGAATTCAGCTAAATTTAACACAACGCCCGCATCAAGCACTTTTCA
GTTCGTGAATATTTCTTGGGCGTGGTCGATCGATGTAGATTTTTTGGATA
AATGCAGAATTTCGATTGACTGGTAAATTCTTAATTTCATGCAACTAAAT
TTTAGCACAACGTCCGTATCACCAAAGTTCGTGAATAATTTTAAGGCATG
GTCGATCAATGTAAACTTTGTGAATAATGCAGAGTATTATTTGACCggta
aaattattttgtttactGAATTAGCTATTTTATTTTCGCCTTTTATGTTG
GTCATTTTAGCTTTATTTTATAGACTGTTTAATTATATATACaagttatt
tttgagaaaattagatTAGGGTGAAATCTTTGGAGGTTTACAATGATACG
TCGATAAACTAaacatttttggtaaaatttgaattttcaggTTCTTCTTG
ACCTTATTTACACTTACAGTTCATGACTTTGAAGCCATGtgcttttaaat
tttcttaacttcatACAGTTAAATTTAAACCAACGTCAATATGAAGTACT
CTTGAGTTCGTGAATACATTTTGGGTGTGGTCAATGAATTTGACCTGTAA
AATcattttgtttacattattGCTTTATTTCATAGATTGTTCAATTATAC
atacaaattattttttaagaaattagaTTAGATTGAAGTCTTTGGAGAGT
CTCGTAACGTTAGATCTAACCGCCTTATTAAGTATTCCAGAGTTGGTAAA
CACACATCGGGCATTTTCAATAGAAAAGGCCCTTTGGACTGAGATTTTGT
TCTTTGAGCTGGTCCATCTTGCATTACCTATTTtatgttgttttatttta
acgAGTTTTGAAATTAGCCATAGCATAgaaattcagacatagtagacaTA
AAGCAAGAAGTAATGGAGGGAAAAAttatagtcgtctagaaacctttgtg
aaAAATATCTAGGGGTCTTGTTCGGAAGCAATGTTTGCTTTGATTTCATA
Atcgatttgattg
Run BLAST on NCBI

protein sequence of TCONS_00008284-protein

>TCONS_00008284-protein ID=TCONS_00008284-protein|Name=TCONS_00008284-protein|organism=Clytia hemisphaerica|type=polypeptide|length=511bp
MDARNIHYFGKPIDYKITDNAFSSDSFLTIRVKQPGNFVISRTSFERSNL
FVFTTTCHFVKISISKCTFDSVGTYLNQIQVTNVYDSGKNELLVNDSSFK
SSKSGSIYSEGYRVAILNSTFLDNYFCDKDIVIPFSYDMSAGITIKSEHI
TIYNCTFLNNTTPYTVMPTSIYLTLKGVSNRFLNITKVQLCDGGTNEKRS
STAFFVKNIFDVDTVFITDSNFSCLESNYYILGDWSNSHFQNNIRMKFVQ
CDGTSYHALNKPYANYDSNGKIHVHNSTCYQCPFQASCINGIKSRGNYWG
YSNSSGYVTFKICPPFYCCDRLKRCHSYNTCANRRQGRLCGGCRPGDFIS
IFSHNKCVDSSKCLASWFWFVFTIVIVLSFGLLLYHKDVLLAIKNKLHKL
YARLTRIDRGDSVRNRFPDTPYNLISDNEVNETNSHNNLNFDQQSYISGL
IKITFFFYQTASIIRITSSAKMEYHMPYLIETLSSFFDIKISIKSSNLID
LCPIQTEYCCY
Run BLAST on NCBI

transcript from alignment at sc0000084:385766..391140+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008284 ID=TCONS_00008284|Name=TCONS_00008284|organism=Clytia hemisphaerica|type=transcript|length=5375bp|location=Sequence derived from alignment at sc0000084:385766..391140+ (Clytia hemisphaerica)
ggttATTATTTGTCTTTCTACGGATCAAATTTCAAACATCCTTTATCGTA TAGAATTATAAGATGATAAATATTGCACTTTCTGAGTGTATGTAGAGCAG ATAAAATGTGTACTGTATtatctttttacgtgtttttgaTTTTCACATTT TGTTTCGAAGGTTAGTTTATCTTATTTCTGAAAATCATACGTTAACAGTC TTGACTTGAATGGTTGGGTTGTCTGAGGTTTCAGAGGATTTTCATATGTC ACATCCCTAtatcacagacccagtgggGGCCAGTGGGGTATACACTCATA CTGTAAAACTTTGCCGAAATTTTGTCCCCAGTTGgaaaaaaataccctac aatttcagccccactggaaaattgaattTAGTTCCATCCCAATTCATAGT TCAATGAGAAAAACATCTAAAACCATACAAATTAAATTTAACCTGAAAGC AAAAGATTTTCTATCCTCATTGAGGTTTCGATAGAAATATGGGGAAAGGT TtcatcggggctgtgagacaggagcTTATTCTCTGTATATCTATTGCCCT TTTAGCAGAGGCGGAGGAAGGGAACGGTTGATCCCGTTCCGGCCAAAGCA GAAAGCCAAAGCAAAAGTTTCCAATCAAACCAAATTCTGCTTTAAGTCAC CTTGAAAAAGTCTCTATATTGTAACTATCATTACCACTTTGAAAAAGGAG CCAGCTGCAACTCCTAAAAATaatattgtcaaaaatattataacgttaat gtttaaatttcttactttttagTATCTCGTGGAATCGAGCAAAGAACTAT TCATGTGTCACGTGACAAGAGGAGCAAAGACACGATCAATTGCGGTTCAA TTCATCAACCATGCTTTCATTTAAATCACGCTATTAACATTTCACTGGAT GGAGATATCATTTTACTGGATTCACAATATCAATACGTTCGCAATGAAAC TATTGTGATACCTCATTCTTTGGAAATATCAAGCTATTGTGGTAATATTA GTCTAAACTGTAGTGGAGAAATGGCTAAGGTATTGTTCGAGAGCGATTGT GCGTTATTTTCACCATCAGGGAATGTATCTCTACAAGACCTCTCAATTGG ATTTCGTTTACTTAACATTTCTCATCTATTGTCATTTCATATTTCCCAAA TAAAACCATCGAAAGGATCACACGAGGAGCTAGTACCAGAAAGACCAACT GTAATGAAGGTGTTGATGCAAGATTGTCATTTCCATAACTTTTGGATAGA AATAAGAAACCAAGAATATATTAAAGGGATAATATCCTTAAAAGGTAATC AATTCATGAACTCAGATTTGCACTTGTATTcatttgatcaaattttaacA AGTGACAATAAGTTTTTGGAATCCAACCTTCAAATGAACACTAGAAGTAC CAAATATTTCAGTAAATTTATACCCTACACCATGACCGATGACATAGTCC AAGACTCGTTGTTTCAGTATTTCATTAATCGACCAGGAGTTATTTTCACC ATATTAAGGACCGACTTCACACGATCGAGTTTTAGCCTATCAAGCAGTAA AAGTGGCTTGGTGAAAGTCTCAATTTTGAAATGCACTTTTGATCAATCTT ATCGTGATAGAATTAGTAGCCAAGTTTCTATGGATATAAATGACTTTTCA TTACATCANTGATTCGATCGAATCTCAAGTAGTAACAATACATTTCTAAA ACAAACATCCCTTGAGATGGACGCAAGAAATATCCATTATTTTGGAAAAC CTATAGACTACAAAATAACCGACAACGCATTTTCATCAGATTCGTTTTTA ACGATTAGGGTGAAACAACCAGGAAATTTTGTCATATCAAGGACAAGCTT TGAACGTTCGAATTTATTCGTATTTACTACAACGTgtcattttgtaaaaa tatcaaTCTCGAAATGCACTTTTGATTCTGTCGGTACATACTTAAATCAA ATACAAGTGACTAATGTTTACGATAGTGGCAAAAACGAACTTTTAGTTAA CGATTCttcattcaaaagttcaaagtCGGGTTCGATTTACTCTGAAGGGT ACAGGGTTGCAATATTGAATTCAACATTTCTTGACAATTACTTCTGTGAT AAAGATATCGTTATACCTTTCAGCTATGATATGTCAGCTGGTATTACGAT CAAGTCAGAACATATAACCATTTACAATTGTACTTTTCTAAACAATACTA CTCCTTATACAGTGATGCCAACCTCCATATATTTAACACTAAAAGGCGTC AGTAATCGATTTTTAAACATCACAAAAGTACAATTGTGTGACGGTGGAAC GAATGAAAAAAGGTCCAGTACAGCTTTTttcgttaaaaatattttcgatg TAGATACTGTTTTTATTACAGACTCAAATTTCTCATGCTTAGAATCTAAC TATTATATTCTTGGTGACTGGTCGAATTCACACTTTCAAAATAACATTCG AATGAAGTTTGTCCAATGTGACGGAACATCGTACCACGCTCTAAATAAAC CATACGCCAATTACGATAGCAATGGAAAAATACATGTTCATAATTCAACA TGTTATCAATGTCCCTTTCAAGCTTCTTGTATTAACGGTATCAAAAGTAG AGGAAACTATTGGGGTTACTCAAACTCCTCTGGATATGTGACATTTAAGA TATGTCCACCCTTTTATTGTTGTGATCGTTTAAAAAGATGTCATTCGTAT AACACATGTGCAAACAGGCGTCAAGGGCGGTTGTGTGGAGGGTGTAGACC TGGAGACTTTATAAGCATATTTAGTCATAACAAATGTGTTGATAGTTCAA AATGCTTGGCGAGTtggttttggtttgtttttacaATTGTTATCGTATTA TCTTTCGGATTGTTACTATACCACAAAGATGTACTTCTCGCTATTAAAAA CAAACTACATAAACTCTATGCGAGATTGACCAGGATTGATCGTGGAGATT CTGTTCGAAATAGATTCCCGGATACTCCTTATAACTTGATCAGCGACAAC GAAGTGAATGAGACAAACTCACACAACAATCTTAACTTTGATCAGCAATC ATATATTTCAGGTCTTATCAAAATCACATTTTTCTTTTACCAGACAGCTT CAATTATACGAATCACTTCTTCAGCTAAAATGGAATATCACATGCCATAT CTTATTGAAACTCTTTCATCATTTTTCGACATTAAAATCTCAATCAAATC TTCCAATCTGATCGATTTGTGCCCTATCCAAACAGAGTATTGCTGCTATT GAACTTTTCAGATTAAGTATCGTTCTTTCGTGTATTATTCTAATACCAGT ATCACTTCTCGTGGTCAACCTTGTCAGATACCACCAGGAAAACCAATATA AAATCTCGTCATTCATCAACCGGTTGAAAGTTAGCTATGTTCAGATTCTA ATTCTTGGTTATGCTAGCATTGCAACATTTTGTTTACAATCTGTAGATTG TATTGAAATTGACGGTGGACTGTGGATTTTTAATCAAGCTGAAGTGGCGT GTTACCAACAATGGCAGATCATGGTTTTTGTGGTGATTTGTTTTTGGATT GTTCCCTTTCCTTTTGTATTATATTTTGGTTGCTGTTGGCTTCGATCAAA AGCAATCACACCAAATGAAATGTTGCTGACCCTTACATTTCCACCAGTAG TACTGTTTTACAAAACAAGAAACTGGTACCTTGGTCAATCTCAGAATGTA TGGTCAGAGAAAATGACCATAGAACAGAGTGATATTGTAAGCTTCATGAA TCAACCTTTTCGAGTGAGTATAAACAAAGATGAAACGTCTGAACAAATAA TATGCAAGCCAgttaaaattgtttgggagccGGTGTTTGTCGCACGTCGA TTGATCCTTATCATTAGTACCACGTTCATCCGGTCACCGACCAAAATTAT ACCCAACTGGATTTCTGTTGATTATATTCAGTATCCATGATTACACAGTC AAACCTTTTGTCGAAAAGTCGCTCAATTTCATACAATTAATGTCAATGTC GTTATTAATAACTCTAGCGTTTGTAAACACATTCTGGGCGTGGTCAATCA ATATTGACATTGTAGATAATGCAGAGTATTATTTGACCggtaaaattctt ttgtttattgaATTAGTAATCTTACTTTCACCTATCATTTTCGTTATTGT AGCTTTATTTTATAGACTGTTTAATTATATATACAAGTTATTTTTGCGAA AATTAGATTAGGGGTTTTTTGTAGGTTCTTATAACACGTTGATAAACTAA AcatttttggttgatttttcttttggaGGACTTGTATTTTGTTAAATTGG ATTTTTCCGGTTCTTCTTGATCTTATTTACATTCCATGTAGCcatttgtt tttaaactttcttaACTGAATTCAGCTAAATTTAACACAACGCCCGCATC AAGCACTTTTCAGTTCGTGAATATTTCTTGGGCGTGGTCGATCGATGTAG ATTTTTTGGATAAATGCAGAATTTCGATTGACTGGTAAATTCTTAATTTC ATGCAACTAAATTTTAGCACAACGTCCGTATCACCAAAGTTCGTGAATAA TTTTAAGGCATGGTCGATCAATGTAAACTTTGTGAATAATGCAGAGTATT ATTTGACCggtaaaattattttgtttactGAATTAGCTATTTTATTTTCG CCTTTTATGTTGGTCATTTTAGCTTTATTTTATAGACTGTTTAATTATAT ATACaagttatttttgagaaaattagatTAGGGTGAAATCTTTGGAGGTT TACAATGATACGTCGATAAACTAaacatttttggtaaaatttgaattttc aggTTCTTCTTGACCTTATTTACACTTACAGTTCATGACTTTGAAGCCAT GtgcttttaaattttcttaacttcatACAGTTAAATTTAAACCAACGTCA ATATGAAGTACTCTTGAGTTCGTGAATACATTTTGGGTGTGGTCAATGAA TTTGACCTGTAAAATcattttgtttacattattGCTTTATTTCATAGATT GTTCAATTATACatacaaattattttttaagaaattagaTTAGATTGAAG TCTTTGGAGAGTCTCGTAACGTTAGATCTAACCGCCTTATTAAGTATTCC AGAGTTGGTAAACACACATCGGGCATTTTCAATAGAAAAGGCCCTTTGGA CTGAGATTTTGTTCTTTGAGCTGGTCCATCTTGCATTACCTATTTtatgt tgttttattttaacgAGTTTTGAAATTAGCCATAGCATAgaaattcagac atagtagacaTAAAGCAAGAAGTAATGGAGGGAAAAAttatagtcgtcta gaaacctttgtgaaAAATATCTAGGGGTCTTGTTCGGAAGCAATGTTTGC TTTGATTTCATAAtcgatttgattg

Coding sequence (CDS) from alignment at sc0000084:385766..391140+

>TCONS_00008284 ID=TCONS_00008284|Name=TCONS_00008284|organism=Clytia hemisphaerica|type=CDS|length=1536bp|location=Sequence derived from alignment at sc0000084:385766..391140+ (Clytia hemisphaerica)
ATGGACGCAAGAAATATCCATTATTTTGGAAAACCTATAGACTACAAAAT
AACCGACAACGCATTTTCATCAGATTCGTTTTTAACGATTAGGGTGAAAC
AACCAGGAAATTTTGTCATATCAAGGACAAGCTTTGAACGTTCGAATTTA
TTCGTATTTACTACAACGTgtcattttgtaaaaatatcaaTCTCGAAATG
CACTTTTGATTCTGTCGGTACATACTTAAATCAAATACAAGTGACTAATG
TTTACGATAGTGGCAAAAACGAACTTTTAGTTAACGATTCttcattcaaa
agttcaaagtCGGGTTCGATTTACTCTGAAGGGTACAGGGTTGCAATATT
GAATTCAACATTTCTTGACAATTACTTCTGTGATAAAGATATCGTTATAC
CTTTCAGCTATGATATGTCAGCTGGTATTACGATCAAGTCAGAACATATA
ACCATTTACAATTGTACTTTTCTAAACAATACTACTCCTTATACAGTGAT
GCCAACCTCCATATATTTAACACTAAAAGGCGTCAGTAATCGATTTTTAA
ACATCACAAAAGTACAATTGTGTGACGGTGGAACGAATGAAAAAAGGTCC
AGTACAGCTTTTttcgttaaaaatattttcgatgTAGATACTGTTTTTAT
TACAGACTCAAATTTCTCATGCTTAGAATCTAACTATTATATTCTTGGTG
ACTGGTCGAATTCACACTTTCAAAATAACATTCGAATGAAGTTTGTCCAA
TGTGACGGAACATCGTACCACGCTCTAAATAAACCATACGCCAATTACGA
TAGCAATGGAAAAATACATGTTCATAATTCAACATGTTATCAATGTCCCT
TTCAAGCTTCTTGTATTAACGGTATCAAAAGTAGAGGAAACTATTGGGGT
TACTCAAACTCCTCTGGATATGTGACATTTAAGATATGTCCACCCTTTTA
TTGTTGTGATCGTTTAAAAAGATGTCATTCGTATAACACATGTGCAAACA
GGCGTCAAGGGCGGTTGTGTGGAGGGTGTAGACCTGGAGACTTTATAAGC
ATATTTAGTCATAACAAATGTGTTGATAGTTCAAAATGCTTGGCGAGTtg
gttttggtttgtttttacaATTGTTATCGTATTATCTTTCGGATTGTTAC
TATACCACAAAGATGTACTTCTCGCTATTAAAAACAAACTACATAAACTC
TATGCGAGATTGACCAGGATTGATCGTGGAGATTCTGTTCGAAATAGATT
CCCGGATACTCCTTATAACTTGATCAGCGACAACGAAGTGAATGAGACAA
ACTCACACAACAATCTTAACTTTGATCAGCAATCATATATTTCAGGTCTT
ATCAAAATCACATTTTTCTTTTACCAGACAGCTTCAATTATACGAATCAC
TTCTTCAGCTAAAATGGAATATCACATGCCATATCTTATTGAAACTCTTT
CATCATTTTTCGACATTAAAATCTCAATCAAATCTTCCAATCTGATCGAT
TTGTGCCCTATCCAAACAGAGTATTGCTGCTATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004655XLOC_004655Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008284-proteinTCONS_00008284-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008284-exon-sc0000084-1491911889:385766..385925TCONS_00008284-exon-sc0000084-1491911889:385766..385925Clytia hemisphaericaexon
TCONS_00008284-exon-sc0000084-1510915933:385766..385925TCONS_00008284-exon-sc0000084-1510915933:385766..385925Clytia hemisphaericaexon
TCONS_00008284-exon-sc0000084-1575043694:385766..385925TCONS_00008284-exon-sc0000084-1575043694:385766..385925Clytia hemisphaericaexon
TCONS_00008284-exon-sc0000084-1491911889:386538..391140TCONS_00008284-exon-sc0000084-1491911889:386538..391140Clytia hemisphaericaexon
TCONS_00008284-exon-sc0000084-1510915933:386538..391140TCONS_00008284-exon-sc0000084-1510915933:386538..391140Clytia hemisphaericaexon
TCONS_00008284-exon-sc0000084-1575043694:386538..391140TCONS_00008284-exon-sc0000084-1575043694:386538..391140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:385766..391140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.291646 0.307177 0.429241 0.207425 1.21654 0.664313 0.795194 0.924867 0.660202 0.675272 0.94054 0.710131 1.63186 1.7633 2.03396 2.68757 1.09867 1.49836 2.40444 2.12827 2.97188 2.94727 1.51391 2.05806 1.72929 1.55369 5.56064 2.37482 1.67332 1.63133
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008284 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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