TCONS_00007975 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007975
Unique NameTCONS_00007975
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3407

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007975 ID=TCONS_00007975|Name=TCONS_00007975|organism=Clytia hemisphaerica|type=transcript|length=3407bp
GTTCACCctaattattttttgaagatttttgaagaaCTAGTTTTAAGGTA
CACTAAATAAGTATAACTAGTTTTCTAGCGGAAAATCTGTTCAAAAGAAA
CGACCTTCAGACTTGAAACCCAAAAACTGTAATTCTGTAAAActgtaatt
gaaaaaaaaattagaaaatttcagaaaaaaatttatttttgctttgcGTT
CTTCGCTAAATTGACGTCATCATGAACGAAGAAGTCACTTTTTTTGTTCA
TTAACGTACTCGACGAAAGAATGTATCGTGGTGTCTAATTCAATTCGAAG
AGAAAATTGATCAGGAAAAACGTAATCAAAATCCTTATCCAGTTTCTGGC
CGAGGAGTGGTACGGCACACATGAAATTATGACACTCGTCAAATAATCGA
TCACAAATCATGAGTCTTCCTTGGGTATCGAGTGCATTTTTTGGTGGTAC
AACTCTTAATTGAAGCAAACGAGCAAGGTGAACTGCTGCGTCAAGGAGAT
CTTTGCTACATTTTCCGATAATTTTCACATATTCTAACGACACAGAGTTA
ATGTCCATTCTTTCCTTCAAAGCTAAGGTTACAGCATCTGCAGTAAATTC
CATACCGAAATCAAGCAGCAAGGTATCACCTTCGATCATTGAATCTGGTA
TCTGAATTCTCAAATCAAGATGTTTTATGAATCTTATAATCTCTTTTGAC
GATTCACTTTGATTAAAGCAGTTGCGGATTTCTGCATGGGTGGCCGTGTA
TGGTAAAACTTCGGTAAGATCGGTTGATGCGTCTTCTAATAGAGCGTTCA
TAATTCTTATATAAATCATACAGCTTTGTGATTTACCATCAATTAAAAGA
CACGAAccttctacaaaatttgccgGTGTTTGTAACTTAAGATGCATTTT
TCGTAACAAGATGACACTATTTTCGATATCAAAACCTACATGGGTACAAG
CAGGTAAGGCCAAGTGAGTAACTCCGACTGGCGATACATTATCAACTCCA
AAACAGTTCGAAACTCGGAGAAAGGTTTGATGCAGTGATGATGGCTGGTC
GGCTTTGAGAAGATGGCCACGGATCATTTCTTGCGGAGCGTTAAGTTGGA
ATTCATTCTTGCTGATAAACCATCCGACATCATAACAAATTTCAGAGTCA
ACATTTTGTCCAATCGAAACTTTTAAATCTACACATTCGATACTTGGTGG
ATGAAGCTTTAAGTTAAATTTCTTGGAAAAGTTGTTGAACAAGTGAATGA
ACGATAAGCACTCGTTCGAAAAGTCAATCATTACTGAATGTCCATTGTGC
ATCATCTGTGGAACTTCCACAAAACCAACTTGCAATAACTTAAAAAGTCT
CATAACTTTATCCTCGAACGCTtcagaaaacttttcaaaataaactttGG
TTACATTCATAGCACTAAATTCAATTCCTTCATCCAAGTAATCGAGAGAT
TTAAGACAACTTGTACATACTTGATCATCAGTGTCAATATGTAGCGTGTC
TTTTTGAACTACATGGTCGGGTAACTTAAGTTTCAGGTTATAGTGTTTCA
TCAGCGCTAAGACATTGTCCCTTTCCTCGACGCTTAACTGACATTTAACT
TCTAGTGTTGAGAAGGGACATTTCAATTTGGTATTAGGTAACAGCTGTAA
GAATCCAACGCACTCTGTAAATGCAGTGTCAATAACAATAGAATTGTTAT
TTATCATGCAGTTCGGTATAATGGGCGTGAGACGTAAAAAGTCCATAACA
AAAAGAGCGTTTCTCAAATCAACACGAGAAAGTCTACCTCGAACCAAGAC
AAACGAGAAAGGGCACTCGATCTTCTGTTTCGCTTCGTTAAGGTTGGTCA
TGAATTCTTGGCATTCTGGGAAGCTTGTATCAATGATCAGTACATTTGTC
CCAATCATGCATTTCGGGATTTCGATCGCATTGATTGAAGCATATAAATG
AAAACTCAAAGAGTTAAACGGTTCCATGAGCTTTTCACTGAAGTTCATCT
TTCGTTTGTTAAGTTCGGTGAGTTTATTGAAAAACTTGCtaaacaattta
ttttcattatctCGAAGCATTCGTTGGATCCCAAAGATGACGGGTGAGCA
ACTGGAAAGCTCACGGTTAGTAAGGTAGGGCGATATTCCTTTGGTAATGC
ACAGGTACAAACCTGTCAAGAACTCCTGTAAAACAAGGTGCTTAAACTGG
TATACTGGCTCTGTGATCTCTCCACGGCTATATTTGACGATAAGTCCGGT
TTGTTCAAGGTGGACGGGACATTTAAGAGTTACTATATCATCTTCAGTGA
ATAATACTTGATCATTCATATATGTCTTCACTGAAAGCACCATTAGGGCG
TAGACGCACTCGTAGATTTCGTCATCATCAAGAAGCTCAATCAATGGTTT
ATGATAGTTAGCTCGGGTGCCGTGCATATGGTTGCGCAGAAAGACGAGAC
AAGCGTACATGTACAATTCGGTATACGTGTTCAGTGGTTTCGTGATTAAA
TCCTCACTATAGACGATCGCGATGACCCATATAAGAACAGGGGTAGAGGC
CATGATCCTTAAGTTGTCTGAAATTCGAATGGCTTCTCTCACTCGATCTG
CTTTCTCTTTGTTTCCAGCGAAAAACTTTTCGATGTATTTGTCGATTTGA
GCGTCGTTGAAGCCACAAACCTCGACTGTTTTGATGTTTGTTCTGTTTTG
AAGTCCTATTTCTGTCTGCAGGAATCTCCTTATGTAATCGCAAGCTTTCG
GTCGGCCGCATGCAATACTTTTGTGACCATTCAACACAGTTCCATGGGTA
TTGATCAAACTGAATATGGTTTGGAAAGGTGACATCGATGAGTTATTCTG
GGATTCATATACGCCCTGGAGTTCGTCGACTCCGTCAACAATGATCAAAA
TACGATCAGCTATTGGGGCAAGGTCTTTCAAAGATATGCGATCGAAGACC
TTCGGGTATTTCTCTTTAAACAAGTcttcaatagaaacaaaacgTCCTTG
CAGTAGATTGATCTCTCGGCAGGAGAATAGAAAGACAAAGTCTAGAGGTG
TATCAGGGTTCAGCTGATTTCTGGCCCATCTCAAAGCAAACATTTCTAGC
ATTGCTGTTTTTCCCATACCCCCAACCCCGCGAACGAAGACAACATCGTC
GTTCTGTTGAACGAGGTGTTCAAGTTCGATGCTATCTTTCTCTAAATGCC
GTTGCTCTAACAGTGAACTACGGTCTGAGTTGTTGTCCAGGTCTTGATCG
ATTTCGTTGTCCCTGAGAACGGCAAGTTCGGTGTACaggttattgttatt
attatcctgtatgacgtcatgattgaccAAGGGTGAATGGTTTGCAAGCG
AACGGATCACTTCAACATCGTATTGAGATCGCAGTAACAACGATGCATGT
TCGAtat
Run BLAST on NCBI

protein sequence of TCONS_00007975-protein

>TCONS_00007975-protein ID=TCONS_00007975-protein|Name=TCONS_00007975-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1056bp
IEHASLLLRSQYDVEVIRSLANHSPLVNHDVIQDNNNNNLYTELAVLRDN
EIDQDLDNNSDRSSLLEQRHLEKDSIELEHLVQQNDDVVFVRGVGGMGKT
AMLEMFALRWARNQLNPDTPLDFVFLFSCREINLLQGRFVSIEDLFKEKY
PKVFDRISLKDLAPIADRILIIVDGVDELQGVYESQNNSSMSPFQTIFSL
INTHGTVLNGHKSIACGRPKACDYIRRFLQTEIGLQNRTNIKTVEVCGFN
DAQIDKYIEKFFAGNKEKADRVREAIRISDNLRIMASTPVLIWVIAIVYS
EDLITKPLNTYTELYMYACLVFLRNHMHGTRANYHKPLIELLDDDEIYEC
VYALMVLSVKTYMNDQVLFTEDDIVTLKCPVHLEQTGLIVKYSRGEITEP
VYQFKHLVLQEFLTGLYLCITKGISPYLTNRELSSCSPVIFGIQRMLRDN
ENKLFSKFFNKLTELNKRKMNFSEKLMEPFNSLSFHLYASINAIEIPKCM
IGTNVLIIDTSFPECQEFMTNLNEAKQKIECPFSFVLVRGRLSRVDLRNA
LFVMDFLRLTPIIPNCMINNNSIVIDTAFTECVGFLQLLPNTKLKCPFST
LEVKCQLSVEERDNVLALMKHYNLKLKLPDHVVQKDTLHIDTDDQVCTSC
LKSLDYLDEGIEFSAMNVTKVYFEKFSEAFEDKVMRLFKLLQVGFVEVPQ
MMHNGHSVMIDFSNECLSFIHLFNNFSKKFNLKLHPPSIECVDLKVSIGQ
NVDSEICYDVGWFISKNEFQLNAPQEMIRGHLLKADQPSSLHQTFLRVSN
CFGVDNVSPVGVTHLALPACTHVGFDIENSVILLRKMHLKLQTPANFVEG
SCLLIDGKSQSCMIYIRIMNALLEDASTDLTEVLPYTATHAEIRNCFNQS
ESSKEIIRFIKHLDLRIQIPDSMIEGDTLLLDFGMEFTADAVTLALKERM
DINSVSLEYVKIIGKCSKDLLDAAVHLARLLQLRVVPPKNALDTQGRLMI
CDRLFDECHNFMCAVPLLGQKLDKDFDYVFPDQFSLRIELDTTIHSFVEY
VNEQKK
Run BLAST on NCBI

transcript from alignment at sc0000080:493792..497198

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007975 ID=TCONS_00007975|Name=TCONS_00007975|organism=Clytia hemisphaerica|type=transcript|length=3407bp|location=Sequence derived from alignment at sc0000080:493792..497198 (Clytia hemisphaerica)
ataTCGAACATGCATCGTTGTTACTGCGATCTCAATACGATGTTGAAGTG ATCCGTTCGCTTGCAAACCATTCACCCTTggtcaatcatgacgtcataca ggataataataacaataacctGTACACCGAACTTGCCGTTCTCAGGGACA ACGAAATCGATCAAGACCTGGACAACAACTCAGACCGTAGTTCACTGTTA GAGCAACGGCATTTAGAGAAAGATAGCATCGAACTTGAACACCTCGTTCA ACAGAACGACGATGTTGTCTTCGTTCGCGGGGTTGGGGGTATGGGAAAAA CAGCAATGCTAGAAATGTTTGCTTTGAGATGGGCCAGAAATCAGCTGAAC CCTGATACACCTCTAGACTTTGTCTTTCTATTCTCCTGCCGAGAGATCAA TCTACTGCAAGGAcgttttgtttctattgaagACTTGTTTAAAGAGAAAT ACCCGAAGGTCTTCGATCGCATATCTTTGAAAGACCTTGCCCCAATAGCT GATCGTATTTTGATCATTGTTGACGGAGTCGACGAACTCCAGGGCGTATA TGAATCCCAGAATAACTCATCGATGTCACCTTTCCAAACCATATTCAGTT TGATCAATACCCATGGAACTGTGTTGAATGGTCACAAAAGTATTGCATGC GGCCGACCGAAAGCTTGCGATTACATAAGGAGATTCCTGCAGACAGAAAT AGGACTTCAAAACAGAACAAACATCAAAACAGTCGAGGTTTGTGGCTTCA ACGACGCTCAAATCGACAAATACATCGAAAAGTTTTTCGCTGGAAACAAA GAGAAAGCAGATCGAGTGAGAGAAGCCATTCGAATTTCAGACAACTTAAG GATCATGGCCTCTACCCCTGTTCTTATATGGGTCATCGCGATCGTCTATA GTGAGGATTTAATCACGAAACCACTGAACACGTATACCGAATTGTACATG TACGCTTGTCTCGTCTTTCTGCGCAACCATATGCACGGCACCCGAGCTAA CTATCATAAACCATTGATTGAGCTTCTTGATGATGACGAAATCTACGAGT GCGTCTACGCCCTAATGGTGCTTTCAGTGAAGACATATATGAATGATCAA GTATTATTCACTGAAGATGATATAGTAACTCTTAAATGTCCCGTCCACCT TGAACAAACCGGACTTATCGTCAAATATAGCCGTGGAGAGATCACAGAGC CAGTATACCAGTTTAAGCACCTTGTTTTACAGGAGTTCTTGACAGGTTTG TACCTGTGCATTACCAAAGGAATATCGCCCTACCTTACTAACCGTGAGCT TTCCAGTTGCTCACCCGTCATCTTTGGGATCCAACGAATGCTTCGagata atgaaaataaattgtttaGCAAGTTTTTCAATAAACTCACCGAACTTAAC AAACGAAAGATGAACTTCAGTGAAAAGCTCATGGAACCGTTTAACTCTTT GAGTTTTCATTTATATGCTTCAATCAATGCGATCGAAATCCCGAAATGCA TGATTGGGACAAATGTACTGATCATTGATACAAGCTTCCCAGAATGCCAA GAATTCATGACCAACCTTAACGAAGCGAAACAGAAGATCGAGTGCCCTTT CTCGTTTGTCTTGGTTCGAGGTAGACTTTCTCGTGTTGATTTGAGAAACG CTCTTTTTGTTATGGACTTTTTACGTCTCACGCCCATTATACCGAACTGC ATGATAAATAACAATTCTATTGTTATTGACACTGCATTTACAGAGTGCGT TGGATTCTTACAGCTGTTACCTAATACCAAATTGAAATGTCCCTTCTCAA CACTAGAAGTTAAATGTCAGTTAAGCGTCGAGGAAAGGGACAATGTCTTA GCGCTGATGAAACACTATAACCTGAAACTTAAGTTACCCGACCATGTAGT TCAAAAAGACACGCTACATATTGACACTGATGATCAAGTATGTACAAGTT GTCTTAAATCTCTCGATTACTTGGATGAAGGAATTGAATTTAGTGCTATG AATGTAACCaaagtttattttgaaaagttttctgaAGCGTTCGAGGATAA AGTTATGAGACTTTTTAAGTTATTGCAAGTTGGTTTTGTGGAAGTTCCAC AGATGATGCACAATGGACATTCAGTAATGATTGACTTTTCGAACGAGTGC TTATCGTTCATTCACTTGTTCAACAACTTTTCCAAGAAATTTAACTTAAA GCTTCATCCACCAAGTATCGAATGTGTAGATTTAAAAGTTTCGATTGGAC AAAATGTTGACTCTGAAATTTGTTATGATGTCGGATGGTTTATCAGCAAG AATGAATTCCAACTTAACGCTCCGCAAGAAATGATCCGTGGCCATCTTCT CAAAGCCGACCAGCCATCATCACTGCATCAAACCTTTCTCCGAGTTTCGA ACTGTTTTGGAGTTGATAATGTATCGCCAGTCGGAGTTACTCACTTGGCC TTACCTGCTTGTACCCATGTAGGTTTTGATATCGAAAATAGTGTCATCTT GTTACGAAAAATGCATCTTAAGTTACAAACACcggcaaattttgtagaag gTTCGTGTCTTTTAATTGATGGTAAATCACAAAGCTGTATGATTTATATA AGAATTATGAACGCTCTATTAGAAGACGCATCAACCGATCTTACCGAAGT TTTACCATACACGGCCACCCATGCAGAAATCCGCAACTGCTTTAATCAAA GTGAATCGTCAAAAGAGATTATAAGATTCATAAAACATCTTGATTTGAGA ATTCAGATACCAGATTCAATGATCGAAGGTGATACCTTGCTGCTTGATTT CGGTATGGAATTTACTGCAGATGCTGTAACCTTAGCTTTGAAGGAAAGAA TGGACATTAACTCTGTGTCGTTAGAATATGTGAAAATTATCGGAAAATGT AGCAAAGATCTCCTTGACGCAGCAGTTCACCTTGCTCGTTTGCTTCAATT AAGAGTTGTACCACCAAAAAATGCACTCGATACCCAAGGAAGACTCATGA TTTGTGATCGATTATTTGACGAGTGTCATAATTTCATGTGTGCCGTACCA CTCCTCGGCCAGAAACTGGATAAGGATTTTGATTACGTTTTTCCTGATCA ATTTTCTCTTCGAATTGAATTAGACACCACGATACATTCTTTCGTCGAGT ACGTTAATGAACAAAAAAAGTGACTTCTTCGTTCATGATGACGTCAATTT AGCGAAGAACgcaaagcaaaaataaatttttttctgaaattttctaattt ttttttcaattacagTTTTACAGAATTACAGTTTTTGGGTTTCAAGTCTG AAGGTCGTTTCTTTTGAACAGATTTTCCGCTAGAAAACTAGTTATACTTA TTTAGTGTACCTTAAAACTAGttcttcaaaaatcttcaaaaaataattag GGTGAAC

Coding sequence (CDS) from alignment at sc0000080:493792..497198

>TCONS_00007975 ID=TCONS_00007975|Name=TCONS_00007975|organism=Clytia hemisphaerica|type=CDS|length=3171bp|location=Sequence derived from alignment at sc0000080:493792..497198 (Clytia hemisphaerica)
aTCGAACATGCATCGTTGTTACTGCGATCTCAATACGATGTTGAAGTGAT
CCGTTCGCTTGCAAACCATTCACCCTTggtcaatcatgacgtcatacagg
ataataataacaataacctGTACACCGAACTTGCCGTTCTCAGGGACAAC
GAAATCGATCAAGACCTGGACAACAACTCAGACCGTAGTTCACTGTTAGA
GCAACGGCATTTAGAGAAAGATAGCATCGAACTTGAACACCTCGTTCAAC
AGAACGACGATGTTGTCTTCGTTCGCGGGGTTGGGGGTATGGGAAAAACA
GCAATGCTAGAAATGTTTGCTTTGAGATGGGCCAGAAATCAGCTGAACCC
TGATACACCTCTAGACTTTGTCTTTCTATTCTCCTGCCGAGAGATCAATC
TACTGCAAGGAcgttttgtttctattgaagACTTGTTTAAAGAGAAATAC
CCGAAGGTCTTCGATCGCATATCTTTGAAAGACCTTGCCCCAATAGCTGA
TCGTATTTTGATCATTGTTGACGGAGTCGACGAACTCCAGGGCGTATATG
AATCCCAGAATAACTCATCGATGTCACCTTTCCAAACCATATTCAGTTTG
ATCAATACCCATGGAACTGTGTTGAATGGTCACAAAAGTATTGCATGCGG
CCGACCGAAAGCTTGCGATTACATAAGGAGATTCCTGCAGACAGAAATAG
GACTTCAAAACAGAACAAACATCAAAACAGTCGAGGTTTGTGGCTTCAAC
GACGCTCAAATCGACAAATACATCGAAAAGTTTTTCGCTGGAAACAAAGA
GAAAGCAGATCGAGTGAGAGAAGCCATTCGAATTTCAGACAACTTAAGGA
TCATGGCCTCTACCCCTGTTCTTATATGGGTCATCGCGATCGTCTATAGT
GAGGATTTAATCACGAAACCACTGAACACGTATACCGAATTGTACATGTA
CGCTTGTCTCGTCTTTCTGCGCAACCATATGCACGGCACCCGAGCTAACT
ATCATAAACCATTGATTGAGCTTCTTGATGATGACGAAATCTACGAGTGC
GTCTACGCCCTAATGGTGCTTTCAGTGAAGACATATATGAATGATCAAGT
ATTATTCACTGAAGATGATATAGTAACTCTTAAATGTCCCGTCCACCTTG
AACAAACCGGACTTATCGTCAAATATAGCCGTGGAGAGATCACAGAGCCA
GTATACCAGTTTAAGCACCTTGTTTTACAGGAGTTCTTGACAGGTTTGTA
CCTGTGCATTACCAAAGGAATATCGCCCTACCTTACTAACCGTGAGCTTT
CCAGTTGCTCACCCGTCATCTTTGGGATCCAACGAATGCTTCGagataat
gaaaataaattgtttaGCAAGTTTTTCAATAAACTCACCGAACTTAACAA
ACGAAAGATGAACTTCAGTGAAAAGCTCATGGAACCGTTTAACTCTTTGA
GTTTTCATTTATATGCTTCAATCAATGCGATCGAAATCCCGAAATGCATG
ATTGGGACAAATGTACTGATCATTGATACAAGCTTCCCAGAATGCCAAGA
ATTCATGACCAACCTTAACGAAGCGAAACAGAAGATCGAGTGCCCTTTCT
CGTTTGTCTTGGTTCGAGGTAGACTTTCTCGTGTTGATTTGAGAAACGCT
CTTTTTGTTATGGACTTTTTACGTCTCACGCCCATTATACCGAACTGCAT
GATAAATAACAATTCTATTGTTATTGACACTGCATTTACAGAGTGCGTTG
GATTCTTACAGCTGTTACCTAATACCAAATTGAAATGTCCCTTCTCAACA
CTAGAAGTTAAATGTCAGTTAAGCGTCGAGGAAAGGGACAATGTCTTAGC
GCTGATGAAACACTATAACCTGAAACTTAAGTTACCCGACCATGTAGTTC
AAAAAGACACGCTACATATTGACACTGATGATCAAGTATGTACAAGTTGT
CTTAAATCTCTCGATTACTTGGATGAAGGAATTGAATTTAGTGCTATGAA
TGTAACCaaagtttattttgaaaagttttctgaAGCGTTCGAGGATAAAG
TTATGAGACTTTTTAAGTTATTGCAAGTTGGTTTTGTGGAAGTTCCACAG
ATGATGCACAATGGACATTCAGTAATGATTGACTTTTCGAACGAGTGCTT
ATCGTTCATTCACTTGTTCAACAACTTTTCCAAGAAATTTAACTTAAAGC
TTCATCCACCAAGTATCGAATGTGTAGATTTAAAAGTTTCGATTGGACAA
AATGTTGACTCTGAAATTTGTTATGATGTCGGATGGTTTATCAGCAAGAA
TGAATTCCAACTTAACGCTCCGCAAGAAATGATCCGTGGCCATCTTCTCA
AAGCCGACCAGCCATCATCACTGCATCAAACCTTTCTCCGAGTTTCGAAC
TGTTTTGGAGTTGATAATGTATCGCCAGTCGGAGTTACTCACTTGGCCTT
ACCTGCTTGTACCCATGTAGGTTTTGATATCGAAAATAGTGTCATCTTGT
TACGAAAAATGCATCTTAAGTTACAAACACcggcaaattttgtagaaggT
TCGTGTCTTTTAATTGATGGTAAATCACAAAGCTGTATGATTTATATAAG
AATTATGAACGCTCTATTAGAAGACGCATCAACCGATCTTACCGAAGTTT
TACCATACACGGCCACCCATGCAGAAATCCGCAACTGCTTTAATCAAAGT
GAATCGTCAAAAGAGATTATAAGATTCATAAAACATCTTGATTTGAGAAT
TCAGATACCAGATTCAATGATCGAAGGTGATACCTTGCTGCTTGATTTCG
GTATGGAATTTACTGCAGATGCTGTAACCTTAGCTTTGAAGGAAAGAATG
GACATTAACTCTGTGTCGTTAGAATATGTGAAAATTATCGGAAAATGTAG
CAAAGATCTCCTTGACGCAGCAGTTCACCTTGCTCGTTTGCTTCAATTAA
GAGTTGTACCACCAAAAAATGCACTCGATACCCAAGGAAGACTCATGATT
TGTGATCGATTATTTGACGAGTGTCATAATTTCATGTGTGCCGTACCACT
CCTCGGCCAGAAACTGGATAAGGATTTTGATTACGTTTTTCCTGATCAAT
TTTCTCTTCGAATTGAATTAGACACCACGATACATTCTTTCGTCGAGTAC
GTTAATGAACAAAAAAAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004495XLOC_004495Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007975-proteinTCONS_00007975-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007975-exon-sc0000080-1491911889:493792..497198TCONS_00007975-exon-sc0000080-1491911889:493792..497198Clytia hemisphaericaexon
TCONS_00007975-exon-sc0000080-1510915933:493792..497198TCONS_00007975-exon-sc0000080-1510915933:493792..497198Clytia hemisphaericaexon
TCONS_00007975-exon-sc0000080-1575043694:493792..497198TCONS_00007975-exon-sc0000080-1575043694:493792..497198Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:493792..497198 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.47703 0.281271 0.728531 0.602154 1.34645 0.933938 1.76858 1.66908 0.79462 1.62114 0.831718 0.783166 2.25032 2.72775 6.45057 9.7347 2.92313 1.86084 2.09913 1.17234 0.429042 0.549338 0.82679 0.948264 2.5251 2.64691 1.39948 1.34745 0.689538 0.489262
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007111NACHT_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007975 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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