XLOC_004495 (gene) - C. hemisphaerica

Overview
NameXLOC_004495
Unique NameXLOC_004495
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000080:493792..497198-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004495 ID=XLOC_004495|Name=XLOC_004495|organism=Clytia hemisphaerica|type=gene|length=3407bp|location=Sequence derived from alignment at sc0000080:493792..497198- (Clytia hemisphaerica)
GTTCACCCTAATTATTTTTTGAAGATTTTTGAAGAACTAGTTTTAAGGTA
CACTAAATAAGTATAACTAGTTTTCTAGCGGAAAATCTGTTCAAAAGAAA
CGACCTTCAGACTTGAAACCCAAAAACTGTAATTCTGTAAAACTGTAATT
GAAAAAAAAATTAGAAAATTTCAGAAAAAAATTTATTTTTGCTTTGCGTT
CTTCGCTAAATTGACGTCATCATGAACGAAGAAGTCACTTTTTTTGTTCA
TTAACGTACTCGACGAAAGAATGTATCGTGGTGTCTAATTCAATTCGAAG
AGAAAATTGATCAGGAAAAACGTAATCAAAATCCTTATCCAGTTTCTGGC
CGAGGAGTGGTACGGCACACATGAAATTATGACACTCGTCAAATAATCGA
TCACAAATCATGAGTCTTCCTTGGGTATCGAGTGCATTTTTTGGTGGTAC
AACTCTTAATTGAAGCAAACGAGCAAGGTGAACTGCTGCGTCAAGGAGAT
CTTTGCTACATTTTCCGATAATTTTCACATATTCTAACGACACAGAGTTA
ATGTCCATTCTTTCCTTCAAAGCTAAGGTTACAGCATCTGCAGTAAATTC
CATACCGAAATCAAGCAGCAAGGTATCACCTTCGATCATTGAATCTGGTA
TCTGAATTCTCAAATCAAGATGTTTTATGAATCTTATAATCTCTTTTGAC
GATTCACTTTGATTAAAGCAGTTGCGGATTTCTGCATGGGTGGCCGTGTA
TGGTAAAACTTCGGTAAGATCGGTTGATGCGTCTTCTAATAGAGCGTTCA
TAATTCTTATATAAATCATACAGCTTTGTGATTTACCATCAATTAAAAGA
CACGAACCTTCTACAAAATTTGCCGGTGTTTGTAACTTAAGATGCATTTT
TCGTAACAAGATGACACTATTTTCGATATCAAAACCTACATGGGTACAAG
CAGGTAAGGCCAAGTGAGTAACTCCGACTGGCGATACATTATCAACTCCA
AAACAGTTCGAAACTCGGAGAAAGGTTTGATGCAGTGATGATGGCTGGTC
GGCTTTGAGAAGATGGCCACGGATCATTTCTTGCGGAGCGTTAAGTTGGA
ATTCATTCTTGCTGATAAACCATCCGACATCATAACAAATTTCAGAGTCA
ACATTTTGTCCAATCGAAACTTTTAAATCTACACATTCGATACTTGGTGG
ATGAAGCTTTAAGTTAAATTTCTTGGAAAAGTTGTTGAACAAGTGAATGA
ACGATAAGCACTCGTTCGAAAAGTCAATCATTACTGAATGTCCATTGTGC
ATCATCTGTGGAACTTCCACAAAACCAACTTGCAATAACTTAAAAAGTCT
CATAACTTTATCCTCGAACGCTTCAGAAAACTTTTCAAAATAAACTTTGG
TTACATTCATAGCACTAAATTCAATTCCTTCATCCAAGTAATCGAGAGAT
TTAAGACAACTTGTACATACTTGATCATCAGTGTCAATATGTAGCGTGTC
TTTTTGAACTACATGGTCGGGTAACTTAAGTTTCAGGTTATAGTGTTTCA
TCAGCGCTAAGACATTGTCCCTTTCCTCGACGCTTAACTGACATTTAACT
TCTAGTGTTGAGAAGGGACATTTCAATTTGGTATTAGGTAACAGCTGTAA
GAATCCAACGCACTCTGTAAATGCAGTGTCAATAACAATAGAATTGTTAT
TTATCATGCAGTTCGGTATAATGGGCGTGAGACGTAAAAAGTCCATAACA
AAAAGAGCGTTTCTCAAATCAACACGAGAAAGTCTACCTCGAACCAAGAC
AAACGAGAAAGGGCACTCGATCTTCTGTTTCGCTTCGTTAAGGTTGGTCA
TGAATTCTTGGCATTCTGGGAAGCTTGTATCAATGATCAGTACATTTGTC
CCAATCATGCATTTCGGGATTTCGATCGCATTGATTGAAGCATATAAATG
AAAACTCAAAGAGTTAAACGGTTCCATGAGCTTTTCACTGAAGTTCATCT
TTCGTTTGTTAAGTTCGGTGAGTTTATTGAAAAACTTGCTAAACAATTTA
TTTTCATTATCTCGAAGCATTCGTTGGATCCCAAAGATGACGGGTGAGCA
ACTGGAAAGCTCACGGTTAGTAAGGTAGGGCGATATTCCTTTGGTAATGC
ACAGGTACAAACCTGTCAAGAACTCCTGTAAAACAAGGTGCTTAAACTGG
TATACTGGCTCTGTGATCTCTCCACGGCTATATTTGACGATAAGTCCGGT
TTGTTCAAGGTGGACGGGACATTTAAGAGTTACTATATCATCTTCAGTGA
ATAATACTTGATCATTCATATATGTCTTCACTGAAAGCACCATTAGGGCG
TAGACGCACTCGTAGATTTCGTCATCATCAAGAAGCTCAATCAATGGTTT
ATGATAGTTAGCTCGGGTGCCGTGCATATGGTTGCGCAGAAAGACGAGAC
AAGCGTACATGTACAATTCGGTATACGTGTTCAGTGGTTTCGTGATTAAA
TCCTCACTATAGACGATCGCGATGACCCATATAAGAACAGGGGTAGAGGC
CATGATCCTTAAGTTGTCTGAAATTCGAATGGCTTCTCTCACTCGATCTG
CTTTCTCTTTGTTTCCAGCGAAAAACTTTTCGATGTATTTGTCGATTTGA
GCGTCGTTGAAGCCACAAACCTCGACTGTTTTGATGTTTGTTCTGTTTTG
AAGTCCTATTTCTGTCTGCAGGAATCTCCTTATGTAATCGCAAGCTTTCG
GTCGGCCGCATGCAATACTTTTGTGACCATTCAACACAGTTCCATGGGTA
TTGATCAAACTGAATATGGTTTGGAAAGGTGACATCGATGAGTTATTCTG
GGATTCATATACGCCCTGGAGTTCGTCGACTCCGTCAACAATGATCAAAA
TACGATCAGCTATTGGGGCAAGGTCTTTCAAAGATATGCGATCGAAGACC
TTCGGGTATTTCTCTTTAAACAAGTCTTCAATAGAAACAAAACGTCCTTG
CAGTAGATTGATCTCTCGGCAGGAGAATAGAAAGACAAAGTCTAGAGGTG
TATCAGGGTTCAGCTGATTTCTGGCCCATCTCAAAGCAAACATTTCTAGC
ATTGCTGTTTTTCCCATACCCCCAACCCCGCGAACGAAGACAACATCGTC
GTTCTGTTGAACGAGGTGTTCAAGTTCGATGCTATCTTTCTCTAAATGCC
GTTGCTCTAACAGTGAACTACGGTCTGAGTTGTTGTCCAGGTCTTGATCG
ATTTCGTTGTCCCTGAGAACGGCAAGTTCGGTGTACAGGTTATTGTTATT
ATTATCCTGTATGACGTCATGATTGACCAAGGGTGAATGGTTTGCAAGCG
AACGGATCACTTCAACATCGTATTGAGATCGCAGTAACAACGATGCATGT
TCGATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007975TCONS_00007975Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007975-proteinTCONS_00007975-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:493792..497198 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.48	0.28	0.73	0.6	1.35	0.93	1.77	1.67	0.79	1.62	0.83	0.78	2.25	2.73	6.45	9.73	2.92	1.86	2.1	1.17	0.43	0.55	0.83	0.95	2.53	2.65	1.4	1.35	0.69	0.49