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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005682 ID=TCONS_00005682|Name=TCONS_00005682|organism=Clytia hemisphaerica|type=transcript|length=388bp
gaaCCGTTGGATTTTACGAGATGTTGTGCTGATAAATATTCGGAAAGACT
TTTGATGTTTAATGTTTAAAGAAAGCCGTGAAATCGAATATATTTCTTAT
CAACCCAAATATCGTGTCTGTTCCATGTATCAAACCTTTGCATCAGATTA
TTGGACATGGTTAGCAGCTGCTCGCACTGCCTTCAAGACGATtcGATGTC
AGAAACTGAAGATGTTGGTCAATCCAAATTATGATAATGGTTTAACAGAT
CTATTTGAAATTCGAAATTTGGAATATTGATTGATCAAGCGAACACACAA
CTTCTCCATATCCATCATACCTAGAATGTTTAAAATCGAGTGTTGTAAAT
ATGCAGGCCTGTTTGATGACAGCAAGTGTTCTAGGAAA Run BLAST on NCBI transcript from alignment at sc0000054:787920..789282- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005682 ID=TCONS_00005682|Name=TCONS_00005682|organism=Clytia hemisphaerica|type=transcript|length=1363bp|location=Sequence derived from alignment at sc0000054:787920..789282- (Clytia hemisphaerica)
GAACCGTTGGATTTTACGAGATGTTGTGCTGATAAATATTCGGAAAGACT
TTTGATGTTTAATGTTTAAAGAAAGCCGTGAAATCGAATATATTTCTTAT
CAACCCAAATATCGTGTCTGTTCCATGTATCAAACCTTTGCATCAGATTA
TTGGACATGGTTAGCAGCTGCTCGCACTGCCTTCAAGACGATGTGAGTTT
TTACTTGCCTGTCAAGATTTCTGTTCTAGTTCTAGTTCTAGTGATATGTT
TGCATAAGCCTATTCTCTCACGTTCTACGTAAAAGTTATGAAAATGAAAA
TGTTTAAAATCTGCTGTTAGCTATAAATAGTCTAAGAATATACCTTAAAT
TAAGAAATTTTGGCGGATGGTCGAAAAAGTTTTTCCAGAGGGAATTTAAT
TTGGCGGATAAAGGATATTTTTGTCCAAAAAAACGCCATTAAAAAGGAAA
AACCTGTTTTAAAGCCTGAAATAGCACACATTTGGGGGAATAAATAGAGC
ATTTCAAATTTGGCGGATGACAGAAAAAATTATATTTGGTGGGAACCAAA
ATTGCTTCCCTTAAGGAAAATGACGCTAGCCTCATATTCACATTCAACAG
ATTCAACAGATTCAAATCGAAAGTGCTATCATAATTTAGATAGAATGGCA
CGTGTCCCAAAGATAGTGTGGACAATACAGCTATACACAGTAGTTACCTT
TTACAGAAAAAATCAAGTTCATACCTATTTTTGTTCTTGAGATTCAGCGC
GGAAAGCACTATTGCCTGACATAGGAAAAATCTGTGGATAAGCCCGGTTT
TAGTGTTCTGGCCAGCTTGGATCGAACGGCACGTGACCCAAACATTGTGT
AAATGTAAATATAAATAAGTTTAAATATTAAGTAATCTTGGTGTGAAAAT
TTTAATCTTCAACACCTCTTAATTTTTTTACCAAAATAAAGACGTTTATC
GCAGTTAATTTTCATCAATGAGAAAAATCCTGGAAAATGCGAAACACATT
ATGTATATCGTGGGATATATGAAAAATAAAAAAGATTACAAATCTTAAAT
TGGTGATGAAGTTTTCTTATAGCAGTTTGGTCCTTTTCATTTTTACAACA
CTTGAAGATCGGTTTAGGTACGTTAAAAGGACATCATACTCATTATTAAA
CTTTTTCTTTCTTTTAGTCGATGTCAGAAACTGAAGATGTTGGTCAATCC
AAATTATGATAATGGTTTAACAGATCTATTTGAAATTCGAAATTTGGAAT
ATTGATTGATCAAGCGAACACACAACTTCTCCATATCCATCATACCTAGA
ATGTTTAAAATCGAGTGTTGTAAATATGCAGGCCTGTTTGATGACAGCAA
GTGTTCTAGGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005682-exon-sc0000054-1575043694:789091..789282 | TCONS_00005682-exon-sc0000054-1575043694:789091..789282 | Clytia hemisphaerica | exon |
| TCONS_00005682-exon-sc0000054-1575043694:787920..788115 | TCONS_00005682-exon-sc0000054-1575043694:787920..788115 | Clytia hemisphaerica | exon |
| TCONS_00005682-exon-sc0000054-1510915933:789091..789282 | TCONS_00005682-exon-sc0000054-1510915933:789091..789282 | Clytia hemisphaerica | exon |
| TCONS_00005682-exon-sc0000054-1510915933:787920..788115 | TCONS_00005682-exon-sc0000054-1510915933:787920..788115 | Clytia hemisphaerica | exon |
| TCONS_00005682-exon-sc0000054-1491911889:789091..789282 | TCONS_00005682-exon-sc0000054-1491911889:789091..789282 | Clytia hemisphaerica | exon |
| TCONS_00005682-exon-sc0000054-1491911889:787920..788115 | TCONS_00005682-exon-sc0000054-1491911889:787920..788115 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:787920..789282 - |
Blast
The following BLAST results are available for this feature:
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