TCONS_00072180-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072180-protein
Unique NameTCONS_00072180-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2207

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072180-protein ID=TCONS_00072180-protein|Name=TCONS_00072180-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2207bp
MLQNLPHTECASPEEALRIRRGQPAKMIFEESELRSSQFQRVFQYLQRYE
ANPKSLNDFDYEQNKNIQINVVSVLEVLLRYCGIPDPSWMELRNFVHFFN
QNLLDCERSVFTSVYLRADFPGFRTFVVTFLLEMARDFATRSLDQNDRNS
NNNLVQFKRTWEQSAHPYLFFNTDGNSMTFFGINITPNFDLIDPQTQIIL
KQKIIEQQLYQILDRQMAGDFVNFKTNFNSLSKLNKIKVLCRVMGLPETD
FDPDPTYELTIDNMKKMLAIHMRLRCGVPVVLMGETGCGKTTLIRFMCSL
CAGPAAGNQRTPKNMLLVKVHGGITMEDIELRVKKAMEMASQNLNSHTVL
FLDEANTTDAIGLIKEVMVDKMLFGKPLAIAQYGLDIIAACNPYRQHTNE
MIKKLETAGLGYHVGAVDTYEKIGEIPLRQLVYRVHPLPESMKPLVWDFG
QLNSETEQLYARQIVKRYKADGKLPLNDDFVDLLIKVLAESQLFMRNQKD
ECSFVSLRDVERAVQVTSWFHQKMGLFLPLIKEFEEDRGIPLNLQTRLQE
SIEKQRRSLILALAVCYIARLEDRNDYYDYIEKLFTGDFALQGGVEQFKN
EIKRFQEMFINQLHLEDNIAKNQALCENVFMMVICIELRIPLFVVGKPGS
SKSLAKTIVQDNMQGKNSKCKLFQNFKQVFMSSYQCSPLSTADGIIGVFK
QSARFQEQKNLDEYTSVVVLDEVGLAEDSPRMPLKALHPLLEDGTDGSED
LTMTGSDSKSKRVAFIGISNWALDPAKMNRGIMLSRSPPAFDELANTARD
ICASKASIQNKISPLLKQLSHGYIGIYKVQRKTESLKQFKKEEFFGLRDF
YSLIKLVFCLAKKYDGKPPTSEIKNAICRNFSGMNEIEPWPIFKKSLELD
ENEEEAEGEEENEENTMSTVDMIRKSFEPTCACSDSTININNNQIKKRCT
SNRYLLVMTEKYSALPIIEGMSLDENLTVIFGSSFPKDQEFTQVILXMTV
IFGSSFPKDQEFTQVCRDINRIKMCMETGRTVILLNMENLYESLYDALNQ
YYVYMGGQRYVDLGLGTHRVKCRVHEDFKLIVMADKTNVYKTFPIPLINR
LEKHFLVTATAMNPNQLEIEWELTEWANHFAKVSSEKKKFDCEDAFIGYN
NDTCASIIIELYRHMEMPSDKEILDLSKKKLLQVATPDSMARLPKDEREK
YWNLYFEEQTHSSLPEFLCKDIILNKFTRFYQITTFSRLLSPQELENIEV
LDFQIEALSLMQFQTENSFREALRSTYQKVGEKNSIILVQYSLTKTSGDL
VPCAQHITKEIASQVENGDNVKVVFLLQLTRGAKSLVSYQSIWECIHIDE
IRQDGKPKLINYIGKPISSLFEENYDWFHLIQSSVQGAVEIVNKKSAMKA
DVITKKINILNQMLHRETKESMKFAQLILQQMFARLLEGEQKASDKKKVA
NWVPQEAVELRYIPNYGTFGEALVRCVEEKVCPILGDLLYELDFNNNLML
IANSVQFIDLWLELFEVLVCGTSRNDVSRFPKRIQNCQFPFSQHIMVIMD
NMISENHQPDSMAKTCSILQSVSQAPFGQVLLQCGRHNLMRYLKDFVVVN
FHGLSQELFEVLSECLLIEMNKLVQEINKANIETEEDQEMEENSKTEYFQ
SIPMLHLTYERCKDSFANAIQLLRTLPHLIQGVFKNLESGNPLDIIALNE
FLNDLLPEDDPIEDVKVYAAIKGLKKTIQAILLHCERDELRLKWAQVKML
HLFVNDVLYSSSKPQQISGSLALNALYQHIQGLPDAMTSKQSWIIFETFL
KETVIKKEGDEELDMFALRENCLQFFIDVVVEFCFSKEAFERIDQETVIP
HIMGYAFTQNAGGGTKRFSPVEDYAIDDSPVIRSFILQQLLSREVEVQKY
VEDYLDENLRLIQRNSTNGQDEVDIWNMCKIFIYCYQDHLTNTVFNVYKK
NGEFTRHYLNHVSTTLSDVREFFTTPRPRNTLDVKLLEMIAQTRVCLSAC
ADILSSEGSKFIEEKAQEKEDRQLKREQESVVASLGLLVKDIKNTDVHMF
LHRQIIHVYGKQELHNIINEHSWLALNTPENKQNNTNYDRYLIYDKSYKD
ARMAISEFLLHPDDNSTLHQVSASKTKDFVKELATLHFDVFSDIEIDQQY
KDTLIKEMKLKNLDNYLAMAGQNSDKNILEFLYHLAVVLKHSKSDFIALF
KALXLWF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044820XLOC_044820Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072180TCONS_00072180Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 894..919
NoneNo IPR availableCOILSCoilCoilcoord: 1613..1640
NoneNo IPR availableGENE3D3.40.50.300coord: 197..426
e-value: 7.1E-11
score: 41.5
NoneNo IPR availableGENE3D3.40.50.300coord: 631..1106
e-value: 2.3E-19
score: 68.8
NoneNo IPR availableCDDcd00009AAAcoord: 262..393
e-value: 1.19132E-5
score: 45.2147
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 276..425
e-value: 2.2E-5
score: 33.9
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 280..356
e-value: 2.7E-4
score: 21.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 631..831
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 262..394
coord: 440..496

Blast
BLAST of TCONS_00072180-protein vs. Swiss-Prot (Human)
Match: RN213 (E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens GN=RNF213 PE=1 SV=3)

HSP 1 Score: 1035.79 bits (2677), Expect = 0.000e+0
Identity = 604/1407 (42.93%), Postives = 831/1407 (59.06%), Query Frame = 0
Query:    5 LPHTECASPEEALRIRRG------QPAKMIFEESELRSSQFQRVFQYLQRYEANPKSLNDFDYEQNKNIQINVVSVLEVLLRYCGIPDPSWMELRNFVHFFNQNLLDCERSVFTSVYLRAD-FPGFRTFVVTFLLEMARDFATRSLDQNDRNSNNNLV-------------QFKRTWEQSAHPYLFFNTDGNSMTFFGINITPNF----DLIDPQTQIILKQKIIEQQLYQILDRQMAGDFVNFKTNFNSLSKLNKIKVLCRVMGLPETDFDPDPTYELTIDNMKKMLAIHMRLRCGVPVVLMGETGCGKTTLIRFMCSLCAGPAAGNQRTPKNMLLVKVHGGITMEDIELRVKKAMEMASQNLNSH---TVLFLDEANTTDAIGLIKEVMVDKMLFGKPLAIAQYGLDIIAACNPYRQHTNEMIKKLETAGLGYHVGAVDTYEKIGEIPLRQLVYRVHPLPESMKPLVWDFGQLNSETEQLYARQIVKRYKADGKLPLNDDFVDLLIKVLAESQLFMRNQKDECSFVSLRDVERAVQVTSWFHQKMGLFLPLIKEFEEDRGIPLNLQTRLQESIEKQRRSLILALAVCYIARLEDRNDYYDYIEKLFTGDFALQGGVEQFKNEIKRFQEMFINQLHLEDNIAKNQALCENVFMMVICIELRIPLFVVGKPGSSKSLAKTIVQDNMQGKNSKCKLFQNFKQVFMSSYQCSPLSTADGIIGVFKQSARFQEQKNLDEYTSVVVLDEVGLAEDSPRMPLKALHPLLEDGTDGSEDLTMTGSDSKSKRVAFIGISNWALDPAKMNRGIMLSRSPPAFDELANTARDICASKASIQNKISPLLKQLSHGYIGIYKVQRKTESLKQFKKEEFFGLRDFYSLIKLVFCLAKKYDGKPPTSEIKNAICRNFSGMNEIEPWPIFKKSLELDENEEEAEGEEENEENTMSTVDMIRKS-FEPTCACSDSTININNNQIKKRCTSNRYLLVMTEKYSALPIIEGMSLDENLTVIFGSSFPKDQEFTQVILXMTVIFGSSFPKDQEFTQVCRDINRIKMCMETGRTVILLNMENLYESLYDALNQYYVYMGGQRYVDLGLGTHRVKCRVHEDFKLIVMADKTNVYKTFPIPLINRLEKHFLVTATAMNPNQLEIEWELTEWANHFAKVSS----EKKKFDCEDAFIGYNNDTCASIIIELY-----RHMEMPSDKEILDLSKKKLLQVATPDSMARLPKDEREKY---W--NLYFEEQTHSSLPEFLCKDII---LNKFTRFYQITTFSRLLSPQELENIEVLDFQIEA-------LSLMQFQTENSFREALRSTYQKVGEKNSIILVQYSLTKT--SGDLVPCAQH-ITKEIASQVENGDNVKVVFLLQLT---RGAKSLVSYQSIWECIHIDEIRQ 1353
             P   C  P+E + +         +P   ++E     S  FQR +QYL+R+  N + L+ F Y Q  +++      L+  L +CG+ +PSW ELRNF  F N  L DCE S+F +     D   GF+ FVVTF++ MARDFAT SL  +D++   ++V               ++ WE   HPY+FFN D  +MTF G ++ PN     D I   T  ++K+ ++ + LYQ L  Q     V F  +F+ L +  K++ LC  +G+P+   DPD TYELT DNM K+LAI MR RCG+PV++MGETGCGKT LI+F+  L  G    N  T K   LVKVHGG T + I  RV++A  +A  N + H   T+LF DEANTT+AI  IKEV+ D M+ G+PLA    GL IIAACNPYR+H+ EMI +LE+AGLGY V   +T +++G IPLRQLVYRVH LP S+ PLVWDFGQL+   E+LY +QIV+R      + L+++   ++ +VL  SQ FMR  +DECSFVSLRDVER V+V  WFH+   + L  +  F     +  N   R     +    SL+LA+ VCY A LE ++ Y   I + F   +          +EI R Q++F++ + L   IAKN AL ENVFMMV+CIEL+IPLF+VGKPGSSKSLAKTIV D MQG  +   LF++ KQV + S+QCSP ST  GII  F+Q ARFQ+ K+L +Y SVVVLDEVGLAEDSP+MPLK LHPLLEDG        +    +  K+V F+GISNWALDPAKMNRGI +SR  P   EL  +A+ IC+S   +Q+++       +  Y  + K Q K          EFFGLRD+YSLIK+VF  AK  + KP   +I  A+ RNFSG ++I+   IF  +L       EA+  EE     +S + +I+++ F P+               ++    +RYLLV+T+ Y AL I++             + F  DQ+         +IFGS FPKDQE+TQ+CR+INR+K+CMETG+ V+LLN++NLYESLYDALNQYYV++GGQ+YVDLGLGTHRVKCRVH +F+LIV+ +K  VYK FPIPLINRLEKH+L   T +   Q  I  EL  W   F  V +    ++ K+   D FIGY++D CAS+++++      R +     +++ + +K  LL  ATPD++ RL       +   W    YF  Q H+S  +FL   +    L +   F +ITTFSRLL+     + E+L+ ++         L L QF TE SF + +R+       K  I++ Q        S  L+  A++ +  EI    EN D + V F+ +L+   RG   +  +  +W+ +HID++R+
Sbjct: 2127 FPKVTCRPPKEVIDMELSALRSDTEPGMDLWE---FCSETFQRPYQYLRRFNQN-QDLDTFQY-QEGSVEGTPEECLQHFLFHCGVINPSWSELRNFARFLNYQLRDCEASLFCNPSFIGDTLRGFKKFVVTFMIFMARDFATPSLHTSDQSPGKHMVTMDGVREEDLAPFSLRKRWESEPHPYVFFNDDHTTMTFIGFHLQPNINGSVDAISHLTGKVIKRDVMTRDLYQGLLLQR----VPFNVDFDKLPRHKKLERLCLTLGIPQAT-DPDKTYELTTDNMLKILAIEMRFRCGIPVIIMGETGCGKTRLIKFLSDLRRG--GTNADTIK---LVKVHGGTTADMIYSRVREAENVAFANKDQHQLDTILFFDEANTTEAISCIKEVLCDHMVDGQPLA-EDSGLHIIAACNPYRKHSEEMICRLESAGLGYRVSMEETADRLGSIPLRQLVYRVHALPPSLIPLVWDFGQLSDVAEKLYIQQIVQRLVES--ISLDENGTRVITEVLCASQGFMRKTEDECSFVSLRDVERCVKVFRWFHEHSAMLLAQLNAFLSKSSVSKNHTER-----DPVLWSLMLAIGVCYHASLEKKDSYRKAIARFFPKPY---DDSRLLLDEITRAQDLFLDGVPLRKTIAKNLALKENVFMMVVCIELKIPLFLVGKPGSSKSLAKTIVADAMQGPAAYSDLFRSLKQVHLVSFQCSPHSTPQGIISTFRQCARFQQGKDLQQYVSVVVLDEVGLAEDSPKMPLKTLHPLLEDGC-------IEDDPAPHKKVGFVGISNWALDPAKMNRGIFVSRGSPNETELIESAKGICSSDILVQDRVQGYFASFAKAYETVCKRQDK----------EFFGLRDYYSLIKMVFAAAKASNRKPSPQDIAQAVLRNFSGKDDIQALDIFLANLP------EAKCSEE-----VSPMQLIKQNIFGPSQKVPGG---------EQEDAESRYLLVLTKNYVALQILQQ------------TFFEGDQQ-------PEIIFGSGFPKDQEYTQLCRNINRVKICMETGKMVLLLNLQNLYESLYDALNQYYVHLGGQKYVDLGLGTHRVKCRVHPNFRLIVIEEKDVVYKHFPIPLINRLEKHYLDINTVLEKWQKSIVEELCAWVEKFINVKAHHFQKRHKYSPSDVFIGYHSDACASVVLQVIERQGPRALTEELHQKVSEEAKSILLNCATPDAVVRLSAYSLGGFAAEWLSQEYFHRQRHNSFADFLQAHLHTADLERHAIFTEITTFSRLLTSH---DCEILESEVTGRAPKPTLLWLQQFDTEYSFLKEVRNCLTNTA-KCKILIFQTDFEDGIRSAQLIASAKYSVINEINKIRENEDRIFVYFITKLSRVGRGTAYVGFHGGLWQSVHIDDLRR 3447          
The following BLAST results are available for this feature:
BLAST of TCONS_00072180-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RN2130.000e+042.93E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens... [more]
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