TCONS_00072046-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072046-protein
Unique NameTCONS_00072046-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072046-protein ID=TCONS_00072046-protein|Name=TCONS_00072046-protein|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
RYGVKLYMLCESSSGYLWNFIIYTGVTTNYTEPAEQPANNPFIFEDLKSP
SKVVLSLLSDLLGKGYSVTLDNYYTSPEIAEILLNYNTDCCGTLRAKTNL
PYDFWYWRPVRGNPPEKKFNGDLTVLRWNDVTKTKKEKVVSMLSTIHTG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044742XLOC_044742Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072046TCONS_00072046Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029526PGBD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029526PiggyBac transposable element-derived proteinPFAMPF13843DDE_Tnp_1_7coord: 1..144
e-value: 3.1E-24
score: 85.8

Blast
[Close]
BLAST of TCONS_00072046-protein vs. Swiss-Prot (Human)
Match: PGBD4 (PiggyBac transposable element-derived protein 4 OS=Homo sapiens GN=PGBD4 PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 5.381e-23
Identity = 60/148 (40.54%), Postives = 84/148 (56.76%), Query Frame = 0 
Query:    1 RYGVKLYMLCESSSGYLWNFIIYTGVTTNYTEPAEQPANNPFIFEDLKSPSKVVLSLLSDLLGKGYSVTLDNYYTSPEIAEILLNYNTDCCGTLRA-KTNLPYDFWYWRPVRGNPPEKKFNGDLTVLRWNDVTKTKKEKVVSMLSTIH 147
            R+G+KLY+LCES SGY+WN +++TG   N  + A          + LKS S++VL+L++DLLG+GY V LDN+  SP +   L    TD  GT R  +  +P D    R  +G     +F G+L  L+W D       K V+MLST H
Sbjct:  272 RFGLKLYVLCESQSGYVWNALVHTGPGMNLKDSA----------DGLKS-SRIVLTLVNDLLGQGYCVFLDNFNISPMLFRELHQNRTDAVGTARLNRKQIPNDL-KKRIAKGTTVA-RFCGELMALKWCD------GKEVTMLSTFH 400
The following BLAST results are available for this feature:
BLAST of TCONS_00072046-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PGBD45.381e-2340.54PiggyBac transposable element-derived protein 4 OS... [more]
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