TCONS_00071763-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071763-protein
Unique NameTCONS_00071763-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length550

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071763-protein ID=TCONS_00071763-protein|Name=TCONS_00071763-protein|organism=Clytia hemisphaerica|type=polypeptide|length=550bp
MMHGSQTEPAISSMTSERNHKNLSHGSRTSINSQRSTNKKVNSHVSFDES
TAAPSSKKPGALSAAGGKKSVDDNFSSSVLQTVFALRWQKKAAQKKKKPD
DFQQMYMHSMSGALGSIIGDEFDGRKTSGTSSEYGDGEDLEALRILALEK
LQAARTRPVAFAVRANYGYNGSEDDDSPVHGMAVSFEKDDCLHIKDKFNK
DWWIGRVVKEGHNIGFVPSPDKLESIRQSGVSGKLKMRQSSTSSNMNLHD
DPQNQRSPLGEAGGNNSFDDETVNSPVRNVSTESNNTNNNNTTNSLNAQK
GKKGIFKKNEQLHPYYVIPSMRPIIFVGPSLKGYEVTDMMQKALFDYLKH
RFSERIIFTRVNADISLAKRSNLNNQNRQPNFPKKSNGQAGLAEVQEEVN
RIFELCRSSQLVVLDCDTINNPSQVIKTSLAPIIVAIKIASPKVLTRLIK
SRGKNQVKHLNIQMIAADKLSQCNEEMFDVVLDENQLEDACEHLGEFLEA
YWRAAVPGAQEGLISQENGGFVNQGGPNGAGYNGVDQYGTPQRNLRTAQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044557XLOC_044557Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071763TCONS_00071763Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000584VDCC_L_bsu
IPR008145GK/Ca_channel_bsu
IPR001452SH3_domain
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0070588calcium ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005245voltage-gated calcium channel activity
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005891voltage-gated calcium channel complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070588 calcium ion transmembrane transport
cellular_component GO:0005891 voltage-gated calcium channel complex
molecular_function GO:0005515 protein binding
molecular_function GO:0005245 voltage-gated calcium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000584Voltage-dependent calcium channel, L-type, beta subunitPRINTSPR01626LCACHANNELBcoord: 360..374
score: 83.73
coord: 394..408
score: 66.47
coord: 329..343
score: 100.0
coord: 314..328
score: 70.78
coord: 448..463
score: 77.57
coord: 344..359
score: 68.93
coord: 464..475
score: 56.86
coord: 409..424
score: 73.35
coord: 427..443
score: 81.31
IPR008145Guanylate kinase/L-type calcium channel beta subunitSMARTSM00072gk_7coord: 320..502
e-value: 2.6E-15
score: 66.8
IPR008145Guanylate kinase/L-type calcium channel beta subunitPFAMPF00625Guanylate_kincoord: 320..501
e-value: 3.8E-34
score: 117.9
NoneNo IPR availableGENE3D2.30.30.40coord: 143..308
e-value: 5.7E-21
score: 74.6
NoneNo IPR availableGENE3D3.40.50.300coord: 309..515
e-value: 7.3E-39
score: 132.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableCDDcd11863SH3_CACNBcoord: 161..222
e-value: 1.27688E-34
score: 123.542
IPR001452SH3 domainPROSITEPS50002SH3coord: 158..219
score: 11.124
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 147..247
coord: 284..317
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 319..504

Blast
[Close]
BLAST of TCONS_00071763-protein vs. Swiss-Prot (Human)
Match: CACB2 (Voltage-dependent L-type calcium channel subunit beta-2 OS=Homo sapiens GN=CACNB2 PE=1 SV=3)

HSP 1 Score: 412.535 bits (1059), Expect = 3.298e-137
Identity = 217/397 (54.66%), Postives = 279/397 (70.28%), Query Frame = 0 
Query:  123 DGRKTSGTSSEYGDGEDLEALRILALEKLQA----ARTRPVAFAVRANYGYNGSEDDDSPVHGMAVSFEKDDCLHIKDKFNKDWWIGRVVKEGHNIGFVPSPDKLESIR----QSGVSGKLKMRQSSTSSNMNLHDD-PQNQRS-PLGEAGGNNS--FDDETVNSPVRNVSTESNNTNNNNTTNSLNAQKGKKGIFKKNEQLHPYYVIPSMRPIIFVGPSLKGYEVTDMMQKALFDYLKHRFSERIIFTRVNADISLAKRSNLNNQNRQPNFPKKSNGQAGLAEVQEEVNRIFELCRSSQLVVLDCDTINNPSQVIKTSLAPIIVAIKIASPKVLTRLIKSRGKNQVKHLNIQMIAADKLSQCNEEMFDVVLDENQLEDACEHLGEFLEAYWRAAVP 507
            D   +  + S+    ED EA+R  A  + QA    A+T+PVAFAVR N  Y+ + +DD PV GMA+SFE  D LH+K+KFN DWWIGR+VKEG  IGF+PSP KLE++R    Q    GK    +S  +S+ +L D  P +++S P   A   ++   D E  + P  + S + +     N+  S ++++ +   FKK E   PY V+PSMRP++ VGPSLKGYEVTDMMQKALFD+LKHRF  RI  TRV ADISLAKRS LNN ++     ++SN ++ LAEVQ E+ RIFEL R+ QLVVLD DTIN+P+Q+ KTSLAPIIV +KI+SPKVL RLIKSRGK+Q KHLN+QM+AADKL+QC  E+FDV+LDENQLEDACEHL ++LEAYW+A  P
Sbjct:   75 DSYTSRPSDSDVSLEEDREAVRREAERQAQAQLEKAKTKPVAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKLENMRLQHEQRAKQGKFYSSKSGGNSSSSLGDIVPSSRKSTPPSSAIDIDATGLDAEENDIPANHRSPKPSA----NSVTSPHSKEKRMPFFKKTEHTPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKHAII-ERSNTRSSLAEVQSEIERIFELARTLQLVVLDADTINHPAQLSKTSLAPIIVYVKISSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPPELFDVILDENQLEDACEHLADYLEAYWKATHP 466
The following BLAST results are available for this feature:
BLAST of TCONS_00071763-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CACB23.298e-13754.66Voltage-dependent L-type calcium channel subunit b... [more]
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