TCONS_00070622-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070622-protein
Unique Name	TCONS_00070622-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	548

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070622-protein ID=TCONS_00070622-protein|Name=TCONS_00070622-protein|organism=Clytia hemisphaerica|type=polypeptide|length=548bp
MLKLIILLVAISCVFGGKPTLSDNRGLRDERLKYNFRVKDYVFGSLFPKP
QEETKDATKLMSLDPEKFSFTKTGEDSDVIQAALVRYKMIAFPDAQVGGA
DSNYPQITGLNVHIIQPYKAMDFKMDESYNLVIAAPMASIEANTVWGALR
GLETFSQAVYQNISDKYYVNSNKIHDFPRFHHRGFLIDTSRHYLSVQTIE
QFIDALAYSKYNVLHWHIVDETSFPFVSKTFPSLSEMGSFNSTTHVYNPE
DVQRVIEYARMRGVRVLPEFDTPGHSDSWYSIENLLTKCYSSGKPNGNTG
PIDPTVESNYEFLKNFFKEVAEVFPDAYLHLGGDEVSFSCWESNPNIAKW
MADHDMGKNYSLLEQYYEQRLLDIVGALGKNYVIWQEVVDNQVKVKPDTV
VNVWKGGWQNEMAKVTKLGYRTILSSPWYLNYISYAADWPNYYKADPQSF
DGTQEQLDLVLGGTACMWGEWVDATNLLARTWARALAVGERLWSAKTVTD
VSDAGLRMWEHRCRYLRRGIPAENVISSNYCRHEWQPNYTPYKKKDEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043943	XLOC_043943	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070622	TCONS_00070622	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025705	Beta_hexosaminidase_sua/sub
IPR015883	Glyco_hydro_20_cat
IPR029019	HEX_eukaryotic_N
IPR017853	Glycoside_hydrolase_SF
IPR029018	Chitobiase/Hex_dom_2-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0004563	beta-N-acetylhexosaminidase activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004563	beta-N-acetylhexosaminidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025705	Beta-hexosaminidase	PRINTS	PR00738	GLHYDRLASE20	coord: 302..320 score: 31.1 coord: 324..337 score: 58.77 coord: 258..275 score: 65.91 coord: 174..191 score: 58.84 coord: 477..494 score: 47.98 coord: 138..158 score: 49.13 coord: 460..476 score: 50.8 coord: 203..224 score: 52.07
IPR025705	Beta-hexosaminidase	PIRSF	PIRSF001093	B-hxosamndse_ab_euk_	coord: 1..544 e-value: 1.4E-160 score: 532.9
None	No IPR available	GENE3D	3.20.20.80		coord: 178..536 e-value: 4.8E-116 score: 387.1
None	No IPR available	GENE3D	3.30.379.10		coord: 43..177 e-value: 2.2E-21 score: 76.2
None	No IPR available	CDD	cd06562	GH20_HexA_HexB-like	coord: 180..519 e-value: 5.93975E-174 score: 497.505
IPR015883	Glycoside hydrolase family 20, catalytic domain	PFAM	PF00728	Glyco_hydro_20	coord: 180..495 e-value: 2.7E-83 score: 280.2
IPR029019	Beta-hexosaminidase, eukaryotic type, N-terminal	PFAM	PF14845	Glycohydro_20b2	coord: 46..157 e-value: 5.1E-13 score: 49.8
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 180..530
IPR029018	Chitobiase/beta-hexosaminidase domain 2-like	SUPERFAMILY	55545	beta-N-acetylhexosaminidase-like domain	coord: 46..179

Blast

[Close]

BLAST of TCONS_00070622-protein vs. Swiss-Prot (Human)
Match: HEXB (Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3)

HSP 1 Score: 482.256 bits (1240), Expect = 8.220e-166
Identity = 245/503 (48.71%), Postives = 325/503 (64.61%), Query Frame = 0

Query:   45 SLFPKPQEETKDATKLMSLDPEKFSFTKT-----GEDSDVIQAALVRYKMIAFPDAQVGGADSNY---PQITGLNVHIIQPYKAMDF---KMDESYNLVIAAPMASIEANTVWGALRGLETFSQAVYQNISDKYYVNSNKIHDFPRFHHRGFLIDTSRHYLSVQTIEQFIDALAYSKYNVLHWHIVDETSFPFVSKTFPSLSEMGSFNSTTHVYNPEDVQRVIEYARMRGVRVLPEFDTPGHSDSW-YSIENLLTKCYSSGKPNGNTGPIDPTVESNYEFLKNFFKEVAEVFPDAYLHLGGDEVSFSCWESNPNIAKWMADHDMGKNYSLLEQYYEQRLLDIVGALGKNYVIWQEVVDNQVKVKPDTVVNVWK-GGWQNEMAKVTKLGYRTILSSPWYLNYISYAADWPNYYKADPQSFDGTQEQLDLVLGGTACMWGEWVDATNLLARTWARALAVGERLWSAKTVTDVSDAGLRMWEHRCRYLRRGIPAENVISSNYCRHE 534
            +L+P P    K    L+ L PE F  + +     G    +++ A  RY    F   +     + +    Q+  L V I    +   F     DESY L++  P+A ++AN VWGALRGLETFSQ VYQ+    + +N + I D PRF HRG LIDTSRHYL V+ I + +DA+A++K+NVLHWHIVD+ SFP+ S TFP LS  GS+ S +HVY P DV+ VIEYAR+RG+RVLPEFDTPGH+ SW    ++LLT CYS      + GPI+PT+ + Y FL  FFKE++EVFPD ++HLGGDEV F CWESNP I  +M     G ++  LE +Y Q++LDI+  + K  ++WQEV D++ K+ P T+V VWK   +  E+++VT  G+  ILS+PWYL+ ISY  DW  YYK +P  F GTQ+Q  L +GG AC+WGE+VDATNL  R W RA AVGERLWS+K V D+ DA  R+  HRCR + RGI A+  + + YC HE
Sbjct:   55 ALWPLPLS-VKMTPNLLHLAPENFYISHSPNSTAGPSCTLLEEAFRRYHGYIFGFYKWHHEPAEFQAKTQVQQLLVSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSY-SLSHVYTPNDVRMVIEYARLRGIRVLPEFDTPGHTLSWGKGQKDLLTPCYSRQNKLDSFGPINPTLNTTYSFLTTFFKEISEVFPDQFIHLGGDEVEFKCWESNPKIQDFMRQKGFGTDFKKLESFYIQKVLDIIATINKGSIVWQEVFDDKAKLAPGTIVEVWKDSAYPEELSRVTASGFPVILSAPWYLDLISYGQDWRKYYKVEPLDFGGTQKQKQLFIGGEACLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQP-LYAGYCNHE 554

The following BLAST results are available for this feature:

BLAST of TCONS_00070622-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070622-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HEXB	8.220e-166	48.71	Beta-hexosaminidase subunit beta OS=Homo sapiens G...	[more]

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TCONS_00070622-protein (polypeptide) - C. hemisphaerica