TCONS_00068416-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068416-protein
Unique NameTCONS_00068416-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length192

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068416-protein ID=TCONS_00068416-protein|Name=TCONS_00068416-protein|organism=Clytia hemisphaerica|type=polypeptide|length=192bp
MKLFLVFLVSLSLLDASSDINLLKSQIQKLQTEVTNEKAEIIELKSRVQT
RNGICQINSNRCGSCLCVEEYGLVNDRYPPSPVNYFCDCREKPVRRDCKE
HYDQGERINGLYRVSMNVIGHVVQVSCMQDHWYGSGGWTVFQRRFDGSEN
FYRSWQEYKHGFGKLQGEHWLGNENLYRLTAQAIVSGSELSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042689XLOC_042689Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068416TCONS_00068416Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..47
NoneNo IPR availableGENE3D1.20.5.190coord: 15..58
e-value: 2.4E-4
score: 20.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 93..192
e-value: 6.2E-6
score: -59.3
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 95..183
e-value: 6.7E-25
score: 88.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 89..192
score: 26.635
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 89..182
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 78..192
e-value: 1.7E-31
score: 108.5

Blast
[Close]
BLAST of TCONS_00068416-protein vs. Swiss-Prot (Human)
Match: FGL2 (Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.411e-20
Identity = 58/177 (32.77%), Postives = 85/177 (48.02%), Query Frame = 0 
Query:   23 LKSQIQKLQTEVTNEKAEIIELKSRVQTRNGICQIN-------------------SNRCGSCLCVEEYGLVNDRYPPSPVNYFCDCREKPVRRDCKEHYDQGERINGLYRVSMNVIGHVVQVSCMQDHWYGSGGWTVFQRRFDGSENFYRSWQEYKHGFGKLQGEHWLGNENLYRLT 180
            L+S++ KL +E+ N K EI  L  R++  N +   N                     +C  C   E+   +  R    PV +        + +DC ++Y  G+R +  YRV+ +      +V C  D     GGWTV Q R DGS NF R+WQ+YK GFG L+ E WLGN+ ++ LT
Sbjct:  133 LESEVNKLSSELKNAKEEINVLHGRLEKLNLVNMNNIENYVDSKVANLTFVVNSLDGKCSKCPSQEQ---IQSR----PVQHL-------IYKDCSDYYAIGKRSSETYRVTPDPKNSSFEVYC--DMETMGGGWTVLQARLDGSTNFTRTWQDYKAGFGNLRREFWLGNDKIHLLT 293
The following BLAST results are available for this feature:
BLAST of TCONS_00068416-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGL21.411e-2032.77Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1[more]
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