TCONS_00068140-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068140-protein
Unique NameTCONS_00068140-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068140-protein ID=TCONS_00068140-protein|Name=TCONS_00068140-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
NGLTYVEWLSFSHIKEHLQHQYGFTGEQADKYLKEYDAQTQFFVMHDYDN
NTKLDGLELLKSMTHFHDEHEEEGQQKENKEEEDQTETLVEFVDMILKDQ
DFNKDGYIDYPEYISYYTKFENNDLDAEKKPEDNKEATTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042534XLOC_042534Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068140TCONS_00068140Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableGENE3D1.10.238.10coord: 39..103
e-value: 2.5E-7
score: 30.4
NoneNo IPR availableGENE3D1.10.238.10coord: 104..136
e-value: 0.0039
score: 16.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..86
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 40..117
e-value: 6.7E-9
score: 36.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 88..123
score: 9.52
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 34..69
score: 6.145
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 101..113
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 38..119

Blast
[Close]
BLAST of TCONS_00068140-protein vs. Swiss-Prot (Human)
Match: MCFD2 (Multiple coagulation factor deficiency protein 2 OS=Homo sapiens GN=MCFD2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 7.191e-16
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0 
Query:   13 HIKEHLQHQYGFTGEQADKYLKEYDAQTQFFVMHDYDNNTKLDGLELLKSMTHFHDEHEEEGQQKENKEEEDQTETLVEFVDMILKDQDFNKDGYIDYPEY 113
            HI EHL+        + +  +   + Q  +F MHDYD N  LDGLEL  ++TH    H+EEG ++     ED+   L+  +D +L+D D N DGYIDY E+
Sbjct:   51 HIMEHLEGVI----NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHV---HKEEGSEQAPLMSEDE---LINIIDGVLRDDDKNNDGYIDYAEF 141
The following BLAST results are available for this feature:
BLAST of TCONS_00068140-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCFD27.191e-1639.60Multiple coagulation factor deficiency protein 2 O... [more]
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