TCONS_00067894-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067894-protein
Unique NameTCONS_00067894-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length234

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067894-protein ID=TCONS_00067894-protein|Name=TCONS_00067894-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
MLHLLRRRSSIFICICLFVVLTFRSLFASIKIQSSKLSVTEDLNKLNLNN
SIDPIEKAQILMEVGSLVGDKTLHFCPLFFINFMRNNDQKVNEPELSSYN
KGMCKKQRGPQCEAKYLQGPLKVSKEILSMEWLHKNELSFVKTGGWYMPT
GCDISTRTAIIIPFRNREQHLPVMLRQLHAVLRHQQIHYRIFVIEQSDEH
PFNRGKIRNIGFKEALRYFPYTCFVFHDVDLVPE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042405XLOC_042405Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067894TCONS_00067894Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003859Galactosyl_T
IPR027995Galactosyl_T_N
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003859Beta-1,4-galactosyltransferasePRINTSPR02050B14GALTRFASEcoord: 223..234
score: 39.45
coord: 192..211
score: 46.88
IPR027995Galactosyltransferase, N-terminalPFAMPF13733Glyco_transf_7Ncoord: 115..234
e-value: 1.5E-41
score: 141.1
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 95..234
e-value: 4.6E-13
score: 48.5
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 117..233

Blast
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BLAST of TCONS_00067894-protein vs. Swiss-Prot (Human)
Match: B4GT1 (Beta-1,4-galactosyltransferase 1 OS=Homo sapiens GN=B4GALT1 PE=1 SV=5)

HSP 1 Score: 110.923 bits (276), Expect = 1.468e-28
Identity = 59/127 (46.46%), Postives = 81/127 (63.78%), Query Frame = 0 
Query:  110 PQC--EAKYLQGPLKVSKEI-LSMEWLHKNELSFVKTGGWYMPTGCDISTRTAIIIPFRNREQHLPVMLRQLHAVLRHQQIHYRIFVIEQSDEHPFNRGKIRNIGFKEALRYFPYTCFVFHDVDLVP 233
            P C  E+  L GP+ +   + + +E + K   + VK GG Y P  C    + AIIIPFRNR++HL   L  LH VL+ QQ+ Y I+VI Q+ +  FNR K+ N+GF+EAL+ + YTCFVF DVDL+P
Sbjct:  128 PACPEESPLLVGPMLIEFNMPVDLELVAKQNPN-VKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIP 253
The following BLAST results are available for this feature:
BLAST of TCONS_00067894-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GT11.468e-2846.46Beta-1,4-galactosyltransferase 1 OS=Homo sapiens G... [more]
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