TCONS_00067687-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067687-protein
Unique NameTCONS_00067687-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1060

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067687-protein ID=TCONS_00067687-protein|Name=TCONS_00067687-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1060bp
MSTFKTVAAAIKEIENWLRLATFLHEPLKDALLGLLHNTTNDPTYTGLPS
VPADLYNTFFARRKQINNLVKKRILHKDQVDLLLPNDGNNQTFSDKFDVT
LIALCIRSFLNLPAPLNGWNKDPLPTDKTKTASVKRALTWRNKVQHAVPK
DIDNAELNKMWVEGTQIIQDLGSSYKTQQLRKISLDPKHEVVLKSLFTYM
SKVKDDCSQHILQLDTQLQQIAKEVQYLKAQKTTNPQEKECKDSCLREII
TYVENNLTVDQKKDLLKQMNINLQDAKDGSLVNLLSNIPWLSLKVNLDLL
GRQDLTSYIQENTLITKGLNAASKALRSYYVTEFIRCLVDQPLSNSSNYY
VPREDVYVELAVLEAVAFDEELSNSDRDSLMKQSHLTKTGIKMNEVLQPD
DQLIFVRGVAGIGKSTWTNMFTLKWAKETLKQVTPIDFLFVFTCSEINAY
GEEPVTLEKLLTDKYHEVFQYITLDDLSLVANRVLIVVDGLDELKNIYSL
GDGARQASRNTLTATTNLDLVYNLIDPRGQHIKRHKSMAIGRPKACEFVK
SKFTHVSKTKTIQICGFDETNVQIYIHKYFGEDGKGKIARVKKAIESSKN
LKVMTSVPVFLWVICNVYSEDLITKPINTNTELYLYTCLVFLRNHLNGLP
GKKYKQLSDIVGDQNILKLLYTLMILSVDTYMKNKVLFTEEDMKRVQCQV
HLEETGFIVKYKRKGIKNQEIYHFNHLVLQEFLCGLFLCVTKQVSSYKDK
RELNSCVPTILGIHRLLQENNNDLFIDLFTNLTKIHNDMSSFFAWILRPL
RSMRFEKFVLQKYLQIPTEMIDGDTLTISATVQQSEFLSLFFEGGCVSND
PDAFKKVRILGGPFSAIDVRNILFFISQIDVRIDDIRLAGGFSPATSMLI
TEAKITDILLNHVADGTSGSSFYGDEKILKIVFNNNIIEELNISNHILEK
SESFIIRGKVESENAKRFVLNLVEYAIENHKQIILYDGPIFKRSYFAKEI
DFDQSKSLLLAVHNIQNEQFLKVVENTTEVELSYTYLRHDYPIGHLQLSW
YQYYLRNFLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042258XLOC_042258Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067687TCONS_00067687Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007111NACHT_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 259..279
NoneNo IPR availablePFAMPF05729NACHTcoord: 403..582
e-value: 7.0E-19
score: 68.3
IPR007111NACHT nucleoside triphosphatasePROSITEPS50837NACHTcoord: 402..494
score: 11.901

Blast
[Close]
BLAST of TCONS_00067687-protein vs. Swiss-Prot (Human)
Match: NLRP3 (NACHT, LRR and PYD domains-containing protein 3 OS=Homo sapiens GN=NLRP3 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 5.296e-17
Identity = 83/365 (22.74%), Postives = 152/365 (41.64%), Query Frame = 0 
Query:  391 IKMNEVLQPDDQ------LIFVRGVAGIGKSTWTNMFTLKWAKETLKQVTPIDFLFVFTCSEINAYGEEPVT--LEKLLTDKYHEVFQYITLDDLSLVANRVLIVVDGLDELK-----NIYSLGDGARQASRNTLTATTNLDLVYNLIDPRGQHIKRHKSMAIGRPKACEFVKSKFTHVSKTKTIQICGFDETNVQIYIHKYFGEDGKGKIARVKKAIESSKNLKVMTSVPVFLWVICNVYSEDL-----ITKPINTNTELYLYTCLVFLRNHLNGLPGKKYKQLSDIVGDQNILKLLYTLMILSVDTYMKNKVLFTEEDMKRVQCQVHLEETGFIVKYKRKGIKNQEIYHFNHLVLQEFLCGLF 737
            IKM  +  PDD+       +  +G AGIGK+       L WA  TL Q    D+LF   C E++   +  +   +     D    + + +         +R+L ++DG DEL+     +I  L    ++A R  +       L+ +LI  R + +     +   RP A E ++    H    + ++I GF E   + Y  KYF ++ + + A     I+ ++ L  M  +P+  W++C    + +     + +   T T +Y++    FL + L    G +         +  +   L+ L  L+ D     K+LF E D++    Q         +   +K +  ++ Y F H+  QEF   ++
Sbjct:  203 IKMELLFDPDDEHSEPVHTVVFQGAAGIGKTILARKMMLDWASGTLYQ-DRFDYLFYIHCREVSLVTQRSLGDLIMSCCPDPNPPIHKIVR------KPSRILFLMDGFDELQGAFDEHIGPLCTDWQKAERGDI-------LLSSLI--RKKLLPEASLLITTRPVALEKLQHLLDH---PRHVEILGFSEAKRKEYFFKYFSDEAQARAAF--SLIQENEVLFTMCFIPLVCWIVCTGLKQQMESGKSLAQTSKTTTAVYVF----FLSSLLQPRGGSQ---------EHGLCAHLWGLCSLAADGIWNQKILFEESDLRNHGLQKADVSAFLRMNLFQKEVDCEKFYSFIHMTFQEFFAAMY 533
The following BLAST results are available for this feature:
BLAST of TCONS_00067687-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NLRP35.296e-1722.74NACHT, LRR and PYD domains-containing protein 3 OS... [more]
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