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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00065511-protein ID=TCONS_00065511-protein|Name=TCONS_00065511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=469bp
MASICQRWFALVLLLMTVAQAKQTICQGSNHLQQKFAYEPTLSFPSKNYP
HLAISYDTTSKVSKILAPSSNSAWKIVPGLCGQGFSFESTTQPNHFLRHR
NFLLFVDPFENTALYKNDACFKPVAGLADCNEVSFQSINYPDRFLRHQGY
RMKLHPNDGSSLFKNDATFNIQTICQGSNILQQKFAYEPTLSFPSKNYPH
LAISYDTTSKVSKILAPSSNSAWKIVPGLCGQGFSFESTTQPNHFLRHRN
FLLFVDPFENIALYKNDACFKPVAGLADCNEVSFQSINYPDRFLRHQGYQ
MKLHQNDGSSLFKNDATFNIQTICQGSDHLQQKFAYEPTLSFPSKNYPNL
AISYDTTSKVSKILAPSSNSAWKIVPGLCGQGFSFESTTQPNHFLRHRHL
LLFVDPFENTALYKNDACFKPVAGLADCNEVSFQSINYPDRFLRHQGYRM
KLHQNDGSSLFKNDATFNI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007934 | AbfB_ABD |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0046373 | L-arabinose metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046556 | alpha-L-arabinofuranosidase activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0046373 |
L-arabinose metabolic process |
| molecular_function |
GO:0046556 |
alpha-L-arabinofuranosidase activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR007934 | Alpha-L-arabinofuranosidase B, arabinose-binding domain | PFAM | PF05270 | AbfB | coord: 212..320
e-value: 1.1E-29
score: 103.1
coord: 121..175
e-value: 2.2E-17
score: 63.2
coord: 363..469
e-value: 4.0E-29
score: 101.3 |
| IPR007934 | Alpha-L-arabinofuranosidase B, arabinose-binding domain | SUPERFAMILY | 110221 | AbfB domain | coord: 346..469 |
| IPR007934 | Alpha-L-arabinofuranosidase B, arabinose-binding domain | SUPERFAMILY | 110221 | AbfB domain | coord: 114..180 |
| IPR007934 | Alpha-L-arabinofuranosidase B, arabinose-binding domain | SUPERFAMILY | 110221 | AbfB domain | coord: 47..129 |
| IPR007934 | Alpha-L-arabinofuranosidase B, arabinose-binding domain | SUPERFAMILY | 110221 | AbfB domain | coord: 213..322 |
| None | No IPR available | GENE3D | 2.80.10.50 | | coord: 188..329
e-value: 3.1E-33
score: 114.5
coord: 39..186
e-value: 6.9E-34
score: 116.6
coord: 337..469
e-value: 6.5E-32
score: 110.2 |
Blast
The following BLAST results are available for this feature:
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