TCONS_00065253-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065253-protein
Unique NameTCONS_00065253-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length858

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065253-protein ID=TCONS_00065253-protein|Name=TCONS_00065253-protein|organism=Clytia hemisphaerica|type=polypeptide|length=858bp
SNSWTRCFSIDQSIELHEGQRIKSLSKNMEKSLFVLLLLLTKTHWTLTND
DQSIYQGFFNYADNLFESTTKHQLLKSTIHKQLQEGILQEYEINVDEITK
TFGNKIRDLLLSYLDDLNKIKYKVKSSIESHVYDYNIQPFNYFNDKQNNS
ARIEPTFSKDLKVNLNQSFAQVPTEIFKYDKKVLNDFTWLQNLDPVFLEN
FKNKPTLLWQYFSSENGASKTFPGINYESDMVDMYDPRRRIWYNQAIMSP
KDVVIATDMSGSMTGTHLTIAKLVVSSLINTLQQDDYFNVISFNSDVDYL
IPCLQNLSEATTSNKQAFKDIVDQLDQPTGMADFPNALQTAFEILNRGAT
EPLATSNCTKVMMIVSDGVTYDDRTEEVLARYNGDKNVVIFSFIVGFTTD
MELMDVACANGGDYYRIQTVGNVLDGVLKYQKVLSKPIGESGTNYVTFTP
LYLDGSGLGMMTTISTGVFANLNNESTSFDIDDGKSDTELIGVAGIDIVI
SLLEQHYPIQEMGVFGHAFVINNNGLFLMHPKFKDQFGYLTDPATVYLSE
VEHTVKPEIGEMLERRMIDGEIGCIRAEADWLFPLSDNTQFVRLNNTYCY
RPLPDTPFFAGVSIPDENLIKTKVDHKLLPDSVIKSGINWLKTAKVESRR
HQIASWPFCTVDHENMKNQPASTHYYLTADDLYSYLSNLHDIADSECDYN
RVMDLLQSGSTIGNFTDQFWSLESLDSHNVTDLFVMTTAGFTIHWSTDFN
ISRLILRDLYEDIRFTNTAAMRLNHQRNLVFTVETKTGRPPWRQKTKNVN
TNLVAITRGIYSKEKHSLMSVIGLSINSLTLIDYMKLNFKSDCDPIQENT
NCXYQSIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040914XLOC_040914Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065253TCONS_00065253Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR013608VWA_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 250..435
e-value: 7.0E-21
score: 85.4
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 265..429
e-value: 5.2E-24
score: 84.7
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 252..421
e-value: 6.9E-17
score: 62.2
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 252..433
score: 16.399
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 250..417
IPR013608VWA N-terminalPFAMPF08399VWA_Ncoord: 154..226
e-value: 6.7E-19
score: 68.5
NoneNo IPR availableGENE3D3.30.450.20coord: 52..264
e-value: 0.02
score: 14.2
NoneNo IPR availableGENE3D3.30.450.20coord: 453..619
e-value: 2.8E-13
score: 49.4

Blast
[Close]
BLAST of TCONS_00065253-protein vs. Swiss-Prot (Human)
Match: CA2D3 (Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens GN=CACNA2D3 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 3.339e-72
Identity = 185/581 (31.84%), Postives = 307/581 (52.84%), Query Frame = 0 
Query:   73 QLLKSTIHKQLQEGILQEYEINVDEITKTFGNKIRDLLLSYLDDLNKIKYKVKSSIESHVYDYNIQPFNYFN-------DKQNNSARIEPTFS-------KDLKVNLNQSFAQVPTEIFKYDKKVLNDFTWLQNLDPVFLENFKNKPTLLWQYFSSENGASKTFPGINYESDM--VDMYDPRRRIWYNQAIMSPKDVVIATDMSGSMTGTHLTIAKLVVSSLINTLQQDDYFNVISFNSDVDYLIPCLQN-LSEATTSNKQAFKDIVDQL-DQPTGMADFPNALQTAFEILNRGATEPLATSNCTKVMMIVSDGVTYDDRTEEVLARYN-GDKNVVIFSFIVG----FTTDMELMDVACANGGDYYRIQTVGNVLDGVLKYQKVLSKPIGESGTNYVTFTPLYLDGS-----------GLGMMTTISTGVFANLNNESTSFDIDDGKSDTELIGVAGIDIVISLLEQHYPIQEMGVFGHAFVINNNGLFLMHPKFK---DQFGYLTDP--ATVYLSEVEHTVKPEIGEMLERRMIDGEIGCIRAEADWLFPLSDNTQFVRLNNTYCYRPLPDTPFFAGVSI 614
            QLL+   +K+ ++ +  E EI+  ++ K     + ++     + + ++    + +   H +D ++Q + YFN       DK  N   +   F         +L VN++ S  QVPT ++  D  ++N   W ++L+ VF++NF   P+L+WQYF S  G  + +PGI +E D   V  +D R R WY QA  SPKDVVI  D+SGSM G  LTIAK  VSS+++TL  DD+FN+I++N ++ Y+ PCL   L +A  +NK+ F++ +D+L  +  GM D   AL  AF IL+         S C++ +M+++DG    D  + + A+YN  D+ V IF++++G    F  +++ M  ACAN G + +I T+ +V + V++Y  VLS+P      + V +T  Y+D +           G  +MTT++  VF+   NE+ S  I        L+GV G D+ +  L +  P  ++G+ G+AF I NNG  L HP+ +   ++      P  ++V LSEVE   + ++   L   M++ + G    E      +    + + + N Y Y  +  TPF  GV++
Sbjct:   64 QLLQKK-YKEYEKDVAIE-EIDGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLKHEFDADLQ-YEYFNAVLINERDKDGNFLELGKEFILAPNDHFNNLPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPGIKWEPDENGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLNGTLVQADRTNKEHFREHLDKLFAKGIGMLDI--ALNEAFNILS-DFNHTGQGSICSQAIMLITDGAV--DTYDTIFAKYNWPDRKVRIFTYLIGREAAFADNLKWM--ACANKGFFTQISTLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYIDSTLPQAQKLTDDQGPVLMTTVAMPVFSK-QNETRSKGI--------LLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRRKPNYSSVDLSEVEWEDRDDV---LRNAMVNRKTGKFSMEVK--KTVDKGKRVLVMTNDYYYTDIKGTPFSLGVAL 620
The following BLAST results are available for this feature:
BLAST of TCONS_00065253-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CA2D33.339e-7231.84Voltage-dependent calcium channel subunit alpha-2/... [more]
back to top