TCONS_00065199-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065199-protein
Unique Name	TCONS_00065199-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	619

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065199-protein ID=TCONS_00065199-protein|Name=TCONS_00065199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=619bp
MDIKEDLKRSSSEGRRSKRKRHGAKEKFKKQKSVFQKLLESEHHMAMVFS
YCGVFLLYGMTDELLGPTLIELSCLAAKPLKTMSWLFFSHDMGLLCGTLF
GGLIVSRVDKNLAMTICLISNALSITILPILHKFMGMVIFVFLYGFFLGT
PDTLANVMLIKVFGKEVAPYIQGVHFFYGFGAFLSPLVARPFLRKSCTYM
INTTKYYDIPDPTFNLTYDSGTGLWAKSNTEFKRDEDSDIRYAYWMAALF
HVPVVFGLSWIFLKRHLDSQKGIYRGSFVSLHNDDELPVQSLDMVSFNPE
ASFWERVQTNSKHRLLAVTILCSVIMYLYEGLMAMFGGYIYSYAVKGTVS
MTSDQGAYLTSMYWGFFSLGRFLGIIIAFFASPKSMLMANVIGCFISSIV
FAAGQSNLKAIYVGTCMLGLSLSSTAPSVIAMAEQYVDLTAHTTSILVIS
SALGELTMPVMVGQAFERVGTSIVPATVLLICFLGFVGYCLLLTFDNDKA
YEHVSAIWKVVRNFLCFGCESKRSKAAKEYTSLESSSDYASSSDLSEEMN
NDVIKPDQIPKPDLFTGRIQPPPDIEVIDESLIIADFVYGGSDSDVTNTD
VTTTPTKTADVSKKEEPKK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040876	XLOC_040876	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065199	TCONS_00065199	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020846	MFS_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 27..271 e-value: 5.2E-19 score: 67.8
None	No IPR available	GENE3D	1.20.1250.20		coord: 296..543 e-value: 1.1E-11 score: 43.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 590..619
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 48..492 e-value: 1.57083E-11 score: 63.8721
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 236..272 coord: 305..493 coord: 42..193

Blast

[Close]

BLAST of TCONS_00065199-protein vs. Swiss-Prot (Human)
Match: MFD4A (Major facilitator superfamily domain-containing protein 4A OS=Homo sapiens GN=MFSD4A PE=2 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 1.684e-52
Identity = 142/482 (29.46%), Postives = 242/482 (50.21%), Query Frame = 0

Query:   42 EHHMAMVFSYCGVFLLYGMTDELLGPTLIELSCLAAKPLKTMSWLFFSHDMGLLCGTLFGGLIVSRVDKNL-AMTICLISNALSITILPILHKFMGMVIFVFLYGFFLGTPDTLANVMLIKVFGKEVAPYIQGVHFFYGFGAFLSPLVARPFLRKSCTYMINTTKYYDIPDPTFNLTYDSGTG-LWAK--SNTEF-----KRDEDSDIRYAYWMAALFHVPVVFGLSWIFLKRHLDSQKGIYRGSFVSLHNDDEL-----PVQSLDMVSFNPE-----------ASFWERVQTNSKHRLLAVTILCSVIMYLYEGLMAMFGGYIYSYAVKGTVSMTSDQGAYLTSMYWGFFSLGRFLGIIIAFFASPKSMLMANVIGCFISSIVFAAGQSNLKAIYVGTCMLGLSLSSTAPSVIAMAEQYVDLTAHTTSILVISSALGELTMPVMVGQAFERVGT-SIVPATVLLICFLGFVGYCLLLTFDN 497
              ++    +Y  VF  +G+    LGPTL++L C     L  +SW+FFS  + LL G+  GG+    + ++L A+    ++ +L   ++P       +   + L G  +G  DT+AN+ L++++ K+ A ++Q +HFF GFGA LSPL+A PFL ++     N+T         F+++   G   + AK  SN  F     K    + + YA+W+ AL ++PV   +  +  K  L +     R   +S    DEL     P +  D  S  P+           +    +    + +   A+ I  ++++++ +GL   +  ++YSYAV+  +S+      YL S++WGF +LGR L I I+    P +M+  NV+G  ++ +V      N+  ++VGT  LGL LSST PS++A  E  +      T++LV  + +GE+ + ++VG  F+  G+ S +   V+  C L F  Y LLL F  
Sbjct:   12 RRNLQPTLTYWSVFFSFGLCIAFLGPTLLDLRCQTHSSLPQISWVFFSQQLCLLLGSALGGVFKRTLAQSLWALFTSSLAISLVFAVIPFCRDVKVLASVMALAGLAMGCIDTVANMQLVRMYQKDSAVFLQVLHFFVGFGALLSPLIADPFLSEANCLPANSTANTTSRGHLFHVSRVLGQHHVDAKPWSNQTFPGLTPKDGAGTRVSYAFWIMALINLPVPMAVLMLLSKERLLTCCPQRRPLLLS---ADELALETQPPEKEDASSLPPKFQSHLGHEDLFSCCQRKNLRGAPYSFFAIHITGALVLFMTDGLTGAYSAFVYSYAVEKPLSVGHKVAGYLPSLFWGFITLGRLLSIPISSRMKPATMVFINVVGVVVTFLVLLIFSYNVVFLFVGTASLGLFLSSTFPSMLAYTEDSLQYKGCATTVLVTGAGVGEMVLQMLVGSIFQAQGSYSFLVCGVIFGC-LAFTFYILLLFFHR 489

The following BLAST results are available for this feature:

BLAST of TCONS_00065199-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065199-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MFD4A	1.684e-52	29.46	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00065199-protein (polypeptide) - C. hemisphaerica