TCONS_00064899-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064899-protein
Unique NameTCONS_00064899-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064899-protein ID=TCONS_00064899-protein|Name=TCONS_00064899-protein|organism=Clytia hemisphaerica|type=polypeptide|length=180bp
FRLPAVANTNHKKCFSVHTTFISSISVTIKNIQITMASNDDQIKELFQAA
DKSGDGKISTRELGKMFKSIGVKLSVKDVKSLVYKFDADGSRDIDLNEFR
ALITDVLNANKQYEEAYEVFKIFDQNGDNTITVEEAKRACANLPKPLSDD
EFVEFMKRLDTDGNGVVLFDEFAKAYACGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040704XLOC_040704Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064899TCONS_00064899Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..116
NoneNo IPR availableGENE3D1.10.238.10coord: 92..128
e-value: 2.4E-14
score: 52.4
NoneNo IPR availableGENE3D1.10.238.10coord: 24..51
e-value: 5.1E-5
score: 22.8
NoneNo IPR availableGENE3D1.10.238.10coord: 52..91
e-value: 1.4E-16
score: 59.8
NoneNo IPR availableGENE3D1.10.238.10coord: 129..179
e-value: 1.5E-15
score: 56.6
IPR002048EF-hand domainSMARTSM00054efh_1coord: 42..70
e-value: 2.0E-4
score: 30.7
coord: 78..106
e-value: 4.5
score: 12.5
coord: 151..179
e-value: 0.33
score: 20.0
coord: 115..143
e-value: 0.0064
score: 25.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 114..176
e-value: 6.1E-14
score: 52.2
coord: 41..103
e-value: 3.0E-10
score: 40.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 147..180
score: 11.78
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 111..146
score: 12.142
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 74..109
score: 9.66
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 38..73
score: 14.513
IPR002048EF-hand domainCDDcd00051EFhcoord: 118..175
e-value: 1.17497E-12
score: 58.7133
IPR002048EF-hand domainCDDcd00051EFhcoord: 42..104
e-value: 4.74572E-10
score: 51.3945
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 87..99
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 51..63
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 34..176

Blast
[Close]
BLAST of TCONS_00064899-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.458e-24
Identity = 45/137 (32.85%), Postives = 78/137 (56.93%), Query Frame = 0 
Query:   42 QIKELFQAADKSGDGKISTRELGKMFKSIGVKLSVKDVKSLVYKFDADGSRDIDLNEFRALITDVLNANKQYEEAYEVFKIFDQNGDNTITVEEAKRACANLPKPLSDDEFVEFMKRLDTDGNGVVLFDEFAKAYAC 178
            + KE F   DK GDG I+T+ELG + +S+G   +  +++ ++ + DADG+  ID  EF  ++   +      EE  E F++FD++G+  I+  E +    NL + L+D+E  E ++  D DG+G V ++EF +    
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
The following BLAST results are available for this feature:
BLAST of TCONS_00064899-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM39.458e-2432.85Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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