TCONS_00064385-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064385-protein
Unique NameTCONS_00064385-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length328

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064385-protein ID=TCONS_00064385-protein|Name=TCONS_00064385-protein|organism=Clytia hemisphaerica|type=polypeptide|length=328bp
LWYQSMVMARESPDLIRSATAPISASSHESRKENKKAKSLTERFRSKFSR
SKGSSHTAIKEIDTNEEITYGKIVVLGQAGVGKTSFIHRLVNNYFTDQYT
PTTTSSSFEVTAIVECEDLFKSKKERFIDYAKSVRKVKSFSRTTISQQLA
KQQCKTKTFKFQLVDTTEDINESSPMEYRSTVANAHGFLLVCSSDKADSI
QYIRDIYQDIAKMRINTTVPVLIIQNKDDLHAGSEEDETFDAELEQLAVE
LDVETCLLSTANSSGFENLTELLLNEMNVYNDDCRVEMALPDEVAYCDQS
DDELETGPKVITNRNAAGKMRRMRSSVN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040369XLOC_040369Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064385TCONS_00064385Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR013684MIRO-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 71..92
score: 38.27
coord: 217..230
score: 35.77
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 68..280
e-value: 6.8E-5
score: -37.6
NoneNo IPR availableGENE3D3.40.50.300coord: 66..288
e-value: 2.7E-24
score: 84.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..56
NoneNo IPR availablePROSITEPS51419RABcoord: 65..328
score: 12.14
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 141..276
e-value: 4.5E-7
score: 29.5
IPR013684Mitochondrial Rho-likePFAMPF08477Roccoord: 72..112
e-value: 2.6E-7
score: 30.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 72..116
coord: 157..277

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064385-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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