TCONS_00063797-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063797-protein
Unique NameTCONS_00063797-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length674

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063797-protein ID=TCONS_00063797-protein|Name=TCONS_00063797-protein|organism=Clytia hemisphaerica|type=polypeptide|length=674bp
MDSILCLVLVIVSLCHNVCSSLHHQYGMELVHMVADKPQTIHVDEQQKTI
FLACEIKTNAELKWYYNDTEITKNPPPYVLDWNKGTAGEKGSILMIRQPR
DGKYDCEAQTSSFLIKATVHIIVKQRHLLPDGFPKIEVHPINVYTRRDSV
DFNCCVTGQPPFRFKWYYNRNPIGSDRIHEVSQTVVKDDMFCSNLKVTNV
SVSVGFYQCVIMNKIGQVVTKDAKIAFNGDHRRKRREVIDKLKCNSISAP
KNITEYPGIVKHTSIHRSCSGSEKMIIRWSEPEYASHVLYYKISIMGEFE
EHSRCYLVSKDKLTFDLNKDRRFYANCSYTVVVRTIPELPEISRQALTVQ
QLYKCPYDGVWSEWSSWSTCICKEKCVGSGVCYTKKTRTKDCLVPSVYNE
SVRIPGNKARCQAGELHDQSSQEGTCAYTXAGELHDQSSQDGTCAYTAKT
CRSLSSISSQSKSGQGSIDYQGFIIAGIIGTLACTVAIIFIIRRNKGRYL
TYQHTVEAKEKPNVYVSYIAGNEKSEDCILNLVASLSNYGINFKMDILCQ
VEINNNGGLPIWLQDNVLTTDKILVVLTKEYVKALQTEGNDLPNSICKVH
SEYKLINNFMYQSCQRTPKVVIMIESGITGDLIPPTYRNLYHCSYPKQYK
DTDEAFNTLVGMLLDTEPVQVHIQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039995XLOC_039995Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063797TCONS_00063797Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013098Ig_I-set
IPR000157TIR_dom
IPR013783Ig-like_fold
IPR013568SEFIR_dom
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 146..220
e-value: 3.8E-8
score: 33.2
IPR000157Toll/interleukin-1 receptor homology (TIR) domainGENE3D3.40.50.10140coord: 502..663
e-value: 5.2E-4
score: 19.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 148..229
e-value: 1.8E-9
score: 37.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 32..147
e-value: 3.5E-8
score: 33.0
IPR013568SEFIR domainPFAMPF08357SEFIRcoord: 513..650
e-value: 2.6E-5
score: 24.4
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 134..226
score: 8.157
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 134..219
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 38..124
NoneNo IPR availableCDDcd00096Igcoord: 150..218
e-value: 7.42825E-6
score: 43.2467

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063797-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top