TCONS_00063669-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063669-protein
Unique NameTCONS_00063669-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length592

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063669-protein ID=TCONS_00063669-protein|Name=TCONS_00063669-protein|organism=Clytia hemisphaerica|type=polypeptide|length=592bp
MANPIQHNEINCNQQENGNLCEAAAFGDIKTIKYLVKKQGIDVNTAEEIS
GSTPLIWSIINSKVKVAKLLLRMGADIHSGSFNEKTAFDWAEANNDSKML
SLLQKNEASKTTFKLLPNILRKLGIGHGGQKALKSPTDSIHTAAGRRNNY
TLKTLLKENSEDINTKNTKGDSPLHTAIKSHRISTTKFLLVSGADMSVRD
EEGFLPLHVAVINNKNKKCDEILKNMVMRGADIMVRDASGRNALDMAFLN
DDLRSVKIICKSLPPNTTHLLDVFGHAIGNDSVELMQLLLKRWPRGVKDE
DGNSLLHMAILKGNFEMVSEVVNTFDVSTTNNNGDTPLHLAVSKRLNEIV
CLLLHNNADVNMQNNQGETPLHTAVQSNLLIFILLVDKCDNTLQNHDGDT
VFHLAARHGKTDFIDLMVKENKPSNDPYSSNHDVSKTSQFKNILNHRNCT
ALHEACFGNHYKTVEKLLDIDIESDIKNCEGKTALDIAISMDHLSLVCLF
KGQKLCGNGLATFLCTVCYEIPTSPNFIYKCPNGHIYCSACDTKDKFLQC
PQCGIPIRKKLRNKDAEEKLAVMFPNAAVEGRVDSFECLFQY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039911XLOC_039911Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063669TCONS_00063669Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 169..198
e-value: 0.21
score: 20.7
coord: 202..235
e-value: 1.5
score: 17.9
coord: 480..508
e-value: 2500.0
score: 2.1
coord: 366..394
e-value: 230.0
score: 9.8
coord: 447..476
e-value: 0.17
score: 20.9
coord: 50..79
e-value: 0.017
score: 24.3
coord: 239..269
e-value: 380.0
score: 8.1
coord: 15..45
e-value: 310.0
score: 8.8
coord: 301..332
e-value: 4.3
score: 16.3
coord: 397..426
e-value: 0.047
score: 22.8
coord: 83..112
e-value: 340.0
score: 8.5
coord: 333..362
e-value: 4.0E-5
score: 33.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 50..82
score: 9.912
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 169..201
score: 12.689
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 202..238
score: 10.579
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 333..365
score: 13.651
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 127..307
e-value: 1.4E-30
score: 106.0
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 141..237
e-value: 9.1E-10
score: 38.9
coord: 277..364
e-value: 9.5E-14
score: 51.7
coord: 21..111
e-value: 6.9E-7
score: 29.7
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 373..409
e-value: 4.4E-9
score: 35.9
coord: 410..504
e-value: 3.1E-14
score: 52.4
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 2..114
e-value: 1.9E-17
score: 62.8
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 308..372
e-value: 1.2E-21
score: 76.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 15..497
score: 56.53
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 140..500
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 15..108
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 510..583
e-value: 3.0E-4
score: 20.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 515..553
score: 8.698
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 515..557
e-value: 0.00321681
score: 34.7288
NoneNo IPR availableCDDcd00204ANKcoord: 298..418
e-value: 7.30793E-28
score: 107.855
NoneNo IPR availableCDDcd00204ANKcoord: 140..259
e-value: 1.47601E-18
score: 81.2758
NoneNo IPR availableCDDcd00204ANKcoord: 394..499
e-value: 1.31549E-14
score: 70.105
NoneNo IPR availableCDDcd00204ANKcoord: 20..190
e-value: 2.78755E-10
score: 57.0082
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 514..565

Blast
[Close]
BLAST of TCONS_00063669-protein vs. Swiss-Prot (Human)
Match: MIB1 (E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.192e-24
Identity = 98/372 (26.34%), Postives = 164/372 (44.09%), Query Frame = 0 
Query:   15 QENGNLCE----AAAFGDIKTIKYLVKKQGIDVNTAEEISGSTPLIWSIINSKVKVAKLLLRMGADIHSGSFNEKTAFDWAEANNDSKMLSLLQKNEASKTTFKLLPNILRKLGIGHGGQKALKSPTDSIHTAAGRRNNYTLKTLLKENSEDINTKNTKGDSPLHTAIKSHRISTTKFLLVSGADMSVRDEEGFLPLHVAVINNKNKKCDEILKNMVMRGADIMVRDASGRNALDMAFLNDDLRSVKIICKSLPPNTTHLLDVFGHAIGNDSVELMQLLLKRWPRGVKDEDGNSLLHMAILKGNFEMVSEVVNT--FDVSTTNNNGDTPLHLAVSKRLNEIVCLLLHNNADVNMQNNQGETPLHTAVQSNLL 380
            QE+G+L E    AAA GD+  ++ L+K+  +DVN   + +G T +  +  N  V + KLLL+   D+              EA +                                      K    ++H AA       ++ +L   S D+N +N +  +PLH A+    +   K LL  G   S++D EG  PLH A+    +KK D+IL  ++  GAD+ + + +G NAL  A L  +  +++++   LP                          + W    K +DG + LH+A L  + E+   +V+    ++   N N  T LHLAV ++  +IV LL+   A +++Q+  G+TPLH A++ + L
Sbjct:  426 QESGDLNEELVKAAANGDVAKVEDLLKRPDVDVNG--QCAGHTAMQAASQNGHVDILKLLLKQNVDV--------------EAED--------------------------------------KDGDRAVHHAAFGDEGAVIE-VLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAI----SKKRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLP--------------------------RPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEALRHHTL 712
The following BLAST results are available for this feature:
BLAST of TCONS_00063669-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MIB15.192e-2426.34E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens G... [more]
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