TCONS_00062413-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062413-protein
Unique NameTCONS_00062413-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1143

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062413-protein ID=TCONS_00062413-protein|Name=TCONS_00062413-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1143bp
MLNKIYPKEEMELSDLDPLPSNEEKNELSGGVDEEGFPQQFDGASSYTSG
TSDADVYFIQAASEGNLLRVQRFITELKRGDYKRFENERDQLFKGFSALH
MAARYDKVDIVNFLLDNEAPIEQKDEEDENTPLLLAIKYNCDETAKQLIT
RGASVCSCNKYGTYALHFAARRGNKDLCEMILNNPCCKLDEQIDKSGGSA
LHSAMLSGNVEVVALLITRGADICHGNNEGEQPIHLAAAEDHSDIIVMLA
KGVLSKEPNTNLHRELQIQFVNYGTGEKDTALHIAAQGGYIETVKTLISI
GAKVNVRTDTDQTPLHLAAIGGQLEVVRYLLMNNAKVGLRDNDQMTPLHK
AAQFGRLETLKFLLERGARDDVRDRDGFTPLMCAVWKGHNHVVEYLLERN
PARIDRLLGINDINSRCVLHLAIEEDCLSTLEMLLKGKGKKLINDTDKDY
KSCVHYAAEKPVDDMLTMLINNGASIDVSDIDEKTPLHTASELGNLSCVK
VLAKEAPGIINATDAKGMSALHLAAMRGHIKVSETLIELGAEISSRDEWN
WTPLDYAARHGYSKTLEVLIENEAKVDAMGTNDATPLHHASQYGHVDCIK
VLLDNGASLKAANNEGKTCLDLAVESYQKEACLALVNHERWEQMMRHVYP
SQPPPMEKLIRLAPDIAEVVLNKCVRKEDMKTKGRTEYNTIYDFGYLDKL
PDEKNLEAPYFGPSVMIKYRRSNLLQHPLTVRLINYKWARMGRWLYIGSL
TSYILFVALLTSLLVVEKDHDQDLKEKNQTTTNFCDNRPKDKIFVGIVPW
LTLGVACFQIIKECIQCLYLGKKYLKDVVNWFEFILYGSTFSFMLPFIMC
QVGGHENYKFLYDLKWIAGAISILCAWFNFLLYLKRAPFFGIYVLMFIEV
LNTLLVVLAVFSILILAFALSFYCLFKLPYELADDDDGNTAFNHLGTGIV
RTIVMMIGELDYRDTFTEKFNDNTKKYLPYKGVSYLVFVFFLIIMVIVVM
NLLVGLAIGDIEAVRNNAYIRMLRGQVRILEILERTYPKFILRRIHTKNS
EVEKPKRYMNNWERFMDWISTLDFDALQEDQQDMTSREIRMREQITNQEK
ELEKTKSKMRVLTSAIEEQAEMMRVMVATIDKIPKHELKKYIH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039100XLOC_039100Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062413TCONS_00062413Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR005821Ion_trans_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1088..1115
NoneNo IPR availableGENE3D1.10.287.70coord: 748..1014
e-value: 2.9E-6
score: 26.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableCDDcd00204ANKcoord: 280..397
e-value: 5.80996E-40
score: 144.449
NoneNo IPR availableCDDcd00204ANKcoord: 87..217
e-value: 1.52378E-27
score: 109.01
NoneNo IPR availableCDDcd00204ANKcoord: 477..603
e-value: 6.68276E-32
score: 121.337
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 517..532
score: 38.78
coord: 598..612
score: 31.56
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 482..512
e-value: 0.084
score: 22.0
coord: 549..578
e-value: 0.056
score: 22.6
coord: 161..191
e-value: 2.3
score: 17.2
coord: 376..406
e-value: 4.9E-5
score: 32.7
coord: 229..260
e-value: 90.0
score: 11.9
coord: 310..339
e-value: 0.0011
score: 28.3
coord: 277..306
e-value: 4.5E-5
score: 32.8
coord: 449..478
e-value: 0.083
score: 22.0
coord: 414..445
e-value: 850.0
score: 5.5
coord: 196..225
e-value: 0.014
score: 24.6
coord: 94..123
e-value: 0.0012
score: 28.1
coord: 615..645
e-value: 410.0
score: 7.9
coord: 343..374
e-value: 3.0E-4
score: 30.1
coord: 582..611
e-value: 6.5E-6
score: 35.6
coord: 516..545
e-value: 5.6E-4
score: 29.2
coord: 128..157
e-value: 0.12
score: 21.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 95..125
e-value: 0.0017
score: 18.6
coord: 376..401
e-value: 5.8E-4
score: 20.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 277..309
score: 12.636
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 549..581
score: 8.95
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 196..228
score: 12.289
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 449..481
score: 8.736
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 343..375
score: 13.197
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 310..342
score: 13.17
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 582..614
score: 13.517
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 94..126
score: 11.968
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 516..548
score: 14.158
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 376..400
score: 9.084
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 425..490
e-value: 1.1E-15
score: 56.9
coord: 177..250
e-value: 1.3E-18
score: 66.3
coord: 324..383
e-value: 1.5E-26
score: 91.9
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 384..424
e-value: 2.4E-9
score: 36.4
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 156..224
e-value: 9.5E-10
score: 38.8
coord: 582..638
e-value: 2.7E-8
score: 34.2
coord: 455..547
e-value: 7.9E-14
score: 51.9
coord: 282..373
e-value: 2.9E-20
score: 72.5
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 491..553
e-value: 6.9E-21
score: 73.9
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 554..648
e-value: 4.0E-26
score: 91.0
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 263..323
e-value: 2.4E-16
score: 59.2
coord: 44..176
e-value: 2.2E-26
score: 91.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 94..638
score: 124.662
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 271..636
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 86..306
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 753..1015
e-value: 4.2E-15
score: 55.5

Blast
[Close]
BLAST of TCONS_00062413-protein vs. Swiss-Prot (Human)
Match: TRPA1 (Transient receptor potential cation channel subfamily A member 1 OS=Homo sapiens GN=TRPA1 PE=1 SV=3)

HSP 1 Score: 375.17 bits (962), Expect = 8.059e-112
Identity = 316/1124 (28.11%), Postives = 542/1124 (48.22%), Query Frame = 0 
Query:   59 IQAASEGNLLRVQRFITE--LKRGDYKRFENERDQLFKGFSALHMAARYDKVDIVNFLLDNEAPIEQKDEEDE--NTPLLLAIKYNCDETAKQLITRGASVCSCNKYGTYALHFAARRGNKDLCEMILNNPCCKLDEQIDKSGGSALHSAMLSGNVEVVALLITRGADICHGNNEGEQPIHLAAAEDHSDIIVMLAKGVLSKEPNTNLHRELQIQFVNYGTGEKDTALHIAAQGGYIETVKTLISIGAKVNVRTDTDQTPLHLAAIGGQLEVVRYLLMNNAK----VGLRDNDQMTPLHKAAQFGRLETLKFLLERGARDDVRDRDGFTPLMCAVWKGHNHVVEYLLERNPARIDRLLGINDINSRCVLHLAIEED-CLSTL--EMLLKGKGKKLINDTDKDYKSCVHYAAEKPVDDMLTMLINNGASIDVSDIDEKTPLHTASELGNLSCVKVLAKEAPG--IINATDAKGMSALHLAAMRGHIKVSETLIELGAEISSRDEWNWTPLDYAARHGYSKTLEVLIENEAK-VDAMGTNDATPLHHASQYGHVDCIKVLLDNGASLKAANNEGKTCLDLAVESYQKEACLALVNHERWEQMMR---HVYPSQPPPMEKLIRLAPDIAEVVLNKCVRKEDMKTKGRTEYNTIYDFGYLD-------KLPDEKNLEAPYFGPSVMIKYRRSNLLQHPLTVRLINYKWARMGRWLYIGSLTSYILFVALLTSLLVVEK---------------DHDQDLKEKNQTTTNFCDNRPKDKIFVGIVPWLTLGVACFQIIKECIQCLYLGKKYLKDVVNWFEFILYGSTFSFMLPFIMCQVGGHENYKFLYDLKWIAGAISILCAWFNFLLYLKRAPFFGIYVLMFIEVLNTLLVVLAVFSILILAFALSFYCLFKLPYELADDDDGNTAFNHLGTGIVRTIVMMIGELDYRDTFTEKFNDNTKKYLPYKGVSYLVFVFFLIIMVIVVMNLLVGLAIGDIEAVRNNAYIRMLRGQVRILEILERTYPKFILRRIHTKNSEV--EKPKRYMNNWERFMDWISTLDFDALQEDQQDMTSREIRMREQITNQEKELE----KTKSKMRVLTSAIEEQAEMMRVMVATIDKIPKHE 1137
            ++   EG+   +Q F  +  LKR D      + D  F     LH AA   +++++   +  ++ +E   E D+  NTPL  A++ N  E+ K L++RGA+    N      LH A +  N ++ +++L +    ++ +  ++G +A+  A  + N E + +L+ +GA  C  N  G  PIH AA     + + +    +L         R+L I F+N G   K T LH+A Q G +E +K  +  GA+++       T +H AA  G  E+V+ ++ + +     V   D    T LH+A+ F   E   +L+  GA  +  D +G +PL+ A      ++V  LL +  A++D    I D   R  LHL +++   L  L  E +   + K+L+ D D D  + +HYA  +     +  L+    SI     D+K+PLH A+  G ++  + L ++     ++N  D  GM+ LHLAA  GH KV + L++ GA   S D   WT L +A+  GY++T++V+++   K  D +  +  T LH A++ GH   + +LL + A +   N +  + L LA+ + +KE  L ++  +RW++ ++   H  P    P+ ++I   P+  +V+L+ C+     + K   +Y   Y+F YL        K P +  +  P    + M++  R  LL HP+    +  KW   G   ++ +L SY L +  +T L+V  K               DH + L   N      C           I+ +L+   + F   KE  Q     + Y  D+ N  E+I+Y +   F+LP  + ++  H        L+W  GAI++   W NFLLYL+R    GI+++M   +L TLL    VF  L+LAF LSFY L  L             F+     I++T  MM+G+++YR++F E +  N    L +  +S+   V F I + IV+MNLL+GLA+GDI  V+ +A ++ +  QV +   LE+  P + LR++  K++ V   KP+     +  F     T +                 +R++I N +K LE    K K +++ LT  +E+Q E++++++  ++ I + E
Sbjct:   36 LKVVFEGSAYGLQNFNKQKKLKRCD------DMDTFF-----LHYAAAEGQIELME-KITRDSSLEVLHEMDDYGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMMAPLHIAVQGMNNEVMKVLLEHRTIDVNLE-GENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGCFPIHQAAFSGSKECMEI----ILRFGEEHGYSRQLHINFMNNG---KATPLHLAVQNGDLEMIKMCLDNGAQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVDIVNTTDGCHETMLHRASLFDHHELADYLISVGADINKIDSEGRSPLILATASASWNIVNLLLSKG-AQVD----IKDNFGRNFLHLTVQQPYGLKNLRPEFMQMQQIKELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLS-DHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADI-VLNKQQASFLHLALHNKRKEVVLTIIRSKRWDECLKIFSHNSPGNKCPITEMIEYLPECMKVLLDFCML-HSTEDKSCRDYYIEYNFKYLQCPLEFTKKTPTQDVIYEPLTALNAMVQNNRIELLNHPVCKEYLLMKWLAYGFRAHMMNLGSYCLGLIPMTILVVNIKPGMAFNSTGIINETSDHSEILDTTNSYLIKTC----------MILVFLS---SIFGYCKEAGQIFQQKRNYFMDISNVLEWIIYTTGIIFVLPLFV-EIPAH--------LQWQCGAIAVYFYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFIFLLLAFGLSFYILLNL----------QDPFSSPLLSIIQTFSMMLGDINYRESFLEPYLRNE---LAHPVLSFAQLVSFTIFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKVDQKSTIVYPNKPRSGGMLFHIFCFLFCTGE-----------------IRQEIPNADKSLEMEILKQKYRLKDLTFLLEKQHELIKLIIQKMEIISETE 1079
The following BLAST results are available for this feature:
BLAST of TCONS_00062413-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRPA18.059e-11228.11Transient receptor potential cation channel subfam... [more]
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