TCONS_00061447-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061447-protein
Unique NameTCONS_00061447-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061447-protein ID=TCONS_00061447-protein|Name=TCONS_00061447-protein|organism=Clytia hemisphaerica|type=polypeptide|length=135bp
MGTLSRIIGMSFLAAIGILLVVLGCVLDEFKTEKGPWWIMFNLFFYILAP
IPTLICKRLGNDFSSFSGTSNLVIEIALFLTTGIVISAFGLPVVLARASV
IKYGAMACVMIGNLFIFGTILLFFTVFDQEDDFGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038546XLOC_038546Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061447TCONS_00061447Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007262VPS55
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007262Vacuolar protein sorting 55PFAMPF04133Vps55coord: 7..131
e-value: 1.1E-35
score: 122.1
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..25
score: 5.0

Blast
[Close]
BLAST of TCONS_00061447-protein vs. Swiss-Prot (Human)
Match: LERL1 (Leptin receptor overlapping transcript-like 1 OS=Homo sapiens GN=LEPROTL1 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 7.421e-35
Identity = 66/135 (48.89%), Postives = 89/135 (65.93%), Query Frame = 0 
Query:    1 MGTLSRIIGMSFLAAIGILLVVLGCVLDEFKTEKGPWWIMFNLFFYILAPIPTLICKRLGNDFSSFSGTSNLVIEIALFLTTGIVISAFGLPVVLARASVIKYGAMACVMIGNLFIFGTILLFFTVFDQEDDFGF 135
            M  +  +I +SF  AIG++ ++LGC L  +      +W +F LFFYIL+PIP  I +RL +D  + S   N   E+A+FLTTGIV+SAFGLP+V ARA +I++GA A V+ GN  IF TIL FF VF   DDF +
Sbjct:    1 MAGIKALISLSFGGAIGLMFLMLGCALPIYNK----YWPLFVLFFYILSPIPYCIARRLVDDTDAMS---NACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFLVFGSNDDFSW 128
The following BLAST results are available for this feature:
BLAST of TCONS_00061447-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LERL17.421e-3548.89Leptin receptor overlapping transcript-like 1 OS=H... [more]
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