TCONS_00061378-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061378-protein
Unique NameTCONS_00061378-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length262

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061378-protein ID=TCONS_00061378-protein|Name=TCONS_00061378-protein|organism=Clytia hemisphaerica|type=polypeptide|length=262bp
RIEIKQIQSSENKSINNMYSFDGKHKSRTKVSLGGASKQVGKKALIESAR
EERLKRELSRKQNEAAIKIQGWTRSCFVQKSLSNNFRDSFDKALENNADL
TGITIASKLIYFFYNTELDYQRLVLLSQKLLKLASSKQIQTLFSSNSDEW
FHRLKRVLVVCSRTLSSSGDRNVSIPLRMLEVFTSLKTYEWLPSEENQMK
TVFSITSHLTTKGYFSQMRQLLITRVPDSLEPSSHPPTPLAGAIKDLIMK
PLELVMGDSPLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038513XLOC_038513Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061378TCONS_00061378Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00061378-protein vs. Swiss-Prot (Human)
Match: UBE3C (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 1.591e-24
Identity = 81/254 (31.89%), Postives = 137/254 (53.94%), Query Frame = 0 
Query:   18 MYSFDGKHKSRTKVSLGGASKQVGKKALIESAREERLKRELSRKQNEAAIKIQGWTRSCFVQKSLSNNFRDSFDKALENN--------ADLTGITIASKLIYFFYNTELDYQRLVLLSQKLLKLASSKQIQTLFSSNSDEWFHRLKRVLVVCSRTLSSSGDR--NVSIPLRMLEVFTSLKTYEWLPSEENQMKTVFS-ITSHLTTKGYFSQMRQLLITRVPDSLEPSSHPPTPLAGAIKDLIMKPLELVMGDSP 260
            M+SF+G  K+R KVSLGGAS++  K +L+   +EER KRE  R++ + AI IQ + R    +K   +  R +FD+    +        A+   +T+  + + FFY    D +RL+ L Q L+K  SS  ++ L  S       ++KR++ +C R L +  D   NV++P+RMLEVF+S  TY  +  + + + +V   I  ++   GY+  +  L+ +++P S+E S     P+A  + + ++KPL       P
Sbjct:    1 MFSFEGDFKTRPKVSLGGASRKEEKASLLHRTQEERRKREEERRRLKNAIIIQSFIRGYRDRKQQYSIQRSAFDRCATLSQSGGAFPIANGPNLTLLVRQLLFFYKQNEDSKRLIWLYQNLIK-HSSLFVKQLDGSERLTCLFQIKRLMSLCCRLLQNCNDDSLNVALPMRMLEVFSSENTYLPVLQDASYVVSVIEQILHYMIHNGYYRSLYLLINSKLPSSIEYSDLSRVPIAKILLENVLKPLHFTYNSCP 253
The following BLAST results are available for this feature:
BLAST of TCONS_00061378-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBE3C1.591e-2431.89Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UB... [more]
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