TCONS_00060949-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060949-protein
Unique NameTCONS_00060949-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060949-protein ID=TCONS_00060949-protein|Name=TCONS_00060949-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MIFVSRSYSLFKGKDFFRKITMMEPLNLQENIENESESNRQNRIREERKK
LFQEFCGSVTLHGFRFIFEEKHIRRFIWLLITTGIFLLSIILFFEILQDF
LEYKTVTTYKTEYVTQDIKFPTVTICPLNGKSISKLNKTIKNFNLTHDEF
IRNIDKLTVNKVNFTDPKVEEIFQKLRKGNFTTYKDLLTSYQLTFKDMVE
ENHIMPALEVPPCKFYGRQCTKDDFAIVRTWFLESLCIQFNPYKGVGKSE
RPTPLSYLDGFQLFLDLNEEEEFGTLHNLHGVVVLIKSYGNPHQVLGDNE
MVAISPGQYHFFKLSTRKFKLLPHPYESDCGERELEVIKKSYPYSQWICF
VDCIVSYAYQECGCVGFDIEELV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038260XLOC_038260Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060949TCONS_00060949Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 55..368
e-value: 6.5E-44
score: 150.5
NoneNo IPR availableGENE3D1.10.287.770coord: 60..111
e-value: 7.5E-6
score: 25.7
NoneNo IPR availableGENE3D2.60.470.10coord: 112..373
e-value: 5.7E-19
score: 68.2

Blast
[Close]
BLAST of TCONS_00060949-protein vs. Swiss-Prot (Human)
Match: ASIC2 (Acid-sensing ion channel 2 OS=Homo sapiens GN=ASIC2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.063e-18
Identity = 94/337 (27.89%), Postives = 138/337 (40.95%), Query Frame = 0 
Query:   52 FQEFCGSVTLHGFR--FIFEEKHIRRFIWLLITTGIFLLSIILFFEILQDFLEYKTVTTYKTEYVTQDIKFPTVTICPLNGKSISKLNKTIKNFNLTH-DEFIRNID-KLTVNKVNFTDPKVEEIFQKLRKGNFTTYK-------DLLTSYQLTFKDMVEENHIMPALEVPPCKFYGRQCTKDDFAIVRTWFLESLCIQFNPYKGVGKSERPTPLSYL----DGFQLFLDLNEEEEFGTLHNLH------GVVVLIKSYGNPH--QVLGDNEMVAISPGQYHFFKLSTRKFKLLPHPYESDCGERELEVIKKSYP-YSQWICFVDCIVSYAYQECGC 364
             Q F  + TLHG R  F++    IRR +W +   G   L ++   E +  +  Y+ VT    E V Q + FP VT+C LNG   S+L       +L H  E +  +D  L +   +  DP V E  +  +K NF  YK       + L       KDM+             CKF G++C   DF  V T +    C  FN     G+  +P   +      +G ++ LD+ ++E               GV V I S   P   Q LG      ++PG   F     ++   LP P+  +C  R  E+    +P YS   C +DC   Y  + C C
Sbjct:   17 IQIFANTSTLHGIRHIFVYGPLTIRRVLWAVAFVGSLGLLLVESSERVSYYFSYQHVTKVD-EVVAQSLVFPAVTLCNLNGFRFSRLTTN----DLYHAGELLALLDVNLQIPDPHLADPSVLEALR--QKANFKHYKPKQFSMLEFLHRVGHDLKDMMLY-----------CKFKGQECGHQDFTTVFTKY--GKCYMFNS----GEDGKPLLTTVKGGTGNGLEIMLDIQQDEYLPIWGETEETTFEAGVKVQIHSQSEPPFIQELG----FGVAPGFQTFVATQEQRLTYLPPPW-GEC--RSSEMGLDFFPVYSITACRIDCETRYIVENCNC 322
The following BLAST results are available for this feature:
BLAST of TCONS_00060949-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC22.063e-1827.89Acid-sensing ion channel 2 OS=Homo sapiens GN=ASIC... [more]
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