TCONS_00060841-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00060841-protein
Unique Name	TCONS_00060841-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	512

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00060841-protein ID=TCONS_00060841-protein|Name=TCONS_00060841-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
MVRKRKKVVRNEEKKEKKVHVPDPNSEDFMYDEVDKFHRNKDKIYLDPNH
KDLEQSDESDLDEEVLGLESDTDENEEEEDENDDEDGSNDDENDESGDEE
DEDEEKGIPSDQAWGKSKKQFYHTDVDDADIYASDEEGELAAQEEEVEAM
TLQKRMAARLDEEDFFNVQEDEKDDEKPEEKTTVKKDLSKMSKKEKLQLL
NKQSPDLLPLINEYQECLNELKTYYNPLMKLTEEDDLSTMSEKCKLFIQT
RHKLLMNYLVNISFYLALKAKHEELKGHPIVDVLFRHREMLSQTKELHQK
LVMEFERLLESVGQEEDDDESDESADEDEKVESDSADEQKTPENTKSKTM
KKNTVETAKKISSVDSTTKKSKKKTKKKQPKNGPEFESDESDVENAVDPL
DYYNSIKTEIERKKLAKKQSGMATLGEDEEEEVVGFGEDGKRMITYEMSK
NKGLVRQRRKELKNPRVKHKMKYKKAKVKHKSMVREVRNEQNRYGGEVTG
IKATLSRSVRIK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038207	XLOC_038207	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00060841	TCONS_00060841	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007146	Sas10/Utp3/C1D
IPR018972	Sas10_C_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..95
None	No IPR available	COILS	Coil	Coil	coord: 133..153
None	No IPR available	COILS	Coil	Coil	coord: 473..493
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 448..482
IPR007146	Sas10/Utp3/C1D	PFAM	PF04000	Sas10_Utp3	coord: 212..292 e-value: 2.5E-10 score: 40.7
IPR018972	Sas10 C-terminal domain	PFAM	PF09368	Sas10	coord: 438..510 e-value: 3.8E-27 score: 94.5

Blast

[Close]

BLAST of TCONS_00060841-protein vs. Swiss-Prot (Human)
Match: SAS10 (Something about silencing protein 10 OS=Homo sapiens GN=UTP3 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.582e-45
Identity = 151/504 (29.96%), Postives = 256/504 (50.79%), Query Frame = 0

Query:   22 PDPNSEDFMYDEVDKFHRNKDKIYLDPNHKDLEQSDESDLDEE---VLGLESDTDENEEEEDENDDEDGSNDDENDESGDEEDEDEEKGIPSDQAWGKSKKQFYHTDVDDADIYASDEEGELAAQEEEVEAMTLQ-------KRMAARLDEEDFFNVQEDEKDDEKP---EEKTTVKKDLSKMSKKEKLQLLNKQSPDLLPLINEYQECLNELKTYYNPLMKLTEEDDLSTMSEKCKLFIQTRHKLLMNYLVNISFYLALKAKHEELKGHPIVDVLFRHREMLSQTKELHQKLVMEFERLLESVGQEEDDDESDESADEDEKVESDSADEQKTPENTKSKTMKKNTVETAKKISSVDSTTKKSKKKTKKKQPKNGPEFESDESDVENAVDPLDYYNSIKTEIERKKLAKKQSGMATLGEDEEEEVVGFGEDGKRMITYEMSKNKGLVRQRRKELKNPRVKHKMKYKKAKVKHKSMVREVRNEQNRYGGEVTGIKATLSRSVRIK 512
            P P    +  D+VD FH  + +  L     +++  DE D +EE   VL L+ D +++E+  +  ++E    ++ +D+ G     + E  +    +WG+ KK +Y TD      Y S   G  + QE E E    +       +R+A  L E+DF     +      P   E +T V KDL+K+S KEKL++L K+SP+LL LI + +  L E+K    PL++L E+  +     K   +++T++ L +NY  NISFYL LKA+     GHP+++ L  +R ++++   + QKL  E   LL                     ++ D+  ++  P+   +K   K+  +T+    +V                       SD+SD +     L YY  I+   +R+KL +K+       E+  EE     ++ KR ITY+++KN+GL  +R+K  +NPRVKH+ K+++AK++ +  VREVR E+ RY GE++GI+A + +S+++K
Sbjct:   36 PSPGDTSYYQDQVDDFHEARSRAALAKGWNEVQSGDEEDGEEEEEEVLALDMDDEDDEDGGNAGEEE--EEENADDDGGSSVQSEAEASVDPSLSWGQRKKLYYDTD------YGSKSRGRQSQQEAEEEEREEEEEAQIIQRRLAQALQEDDFGVAWVEAFAKPVPQVDEAETRVVKDLAKVSVKEKLKMLRKESPELLELIEDLKVKLTEVKDELEPLLELVEQGIIP--PGKGSQYLRTKYNLYLNYCSNISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRHLLT--------------------LKDDAVKKELIPKAKSTKPKPKSVSKTSAAACAVTDL--------------------SDDSDFDEKAK-LKYYKEIE---DRQKLKRKKE------ENSTEEQALEDQNAKRAITYQIAKNRGLTPRRKKIDRNPRVKHREKFRRAKIRRRGQVREVRKEEQRYSGELSGIRAGVKKSIKLK 479

The following BLAST results are available for this feature:

BLAST of TCONS_00060841-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00060841-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SAS10	3.582e-45	29.96	Something about silencing protein 10 OS=Homo sapie...	[more]

You are here

TCONS_00060841-protein (polypeptide) - C. hemisphaerica