TCONS_00060655-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060655-protein
Unique NameTCONS_00060655-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length643

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060655-protein ID=TCONS_00060655-protein|Name=TCONS_00060655-protein|organism=Clytia hemisphaerica|type=polypeptide|length=643bp
MRRPRRLQVNWKSLVGAAHGKRTLKLRPNQRDLYTCPIKLCLHGDFKSCR
GLRKHINTKHPWYYYFDEQPEVKREDMTDFPVAPKRASTAGKPSFSLDEG
IGRDFLTWLGTSCGGGKSNKEARQIGKRAMKYFMHAMGNNENDIDLTNEF
VDCCLSSASIFISFLKVIEEEWKVGPSGAVNYVKCITDFIDFRKANGVSD
NTLRCFTVVEVYLRRANENLRKKKNLDCNRNLDLETLIARNSWATLEEME
VVIPFHMKQFKKIIEKCSESHEARFLTKGELVFCIRFITALLFLRVKCSR
PMTYQFLTVEMVNKARNNGGFVDQREFKTASRYIFDTLILSDDTIEIIDL
YLEYIRPRLNPQCDFLLLSTNGTQFQSLTSAMTILVHEAIGKHINPTRYR
QIVETESSERLNLEEQHYITEDQKHSSTVAKIHYKKTQSRIVAVEGRKCM
EKMTKDARSDGNKNLVEMFNNISCSFDNDVLSHSRRIIEGMKPNAQNSIS
SASCSSSHMEVDTDPYQPVSESLNESTDMVITETFPTNNTPAVADVQEVS
ILNIPNDNIVIKKEAARQQTNRKQPKNVKFTSAEDHCLKQGIEKYGRKSW
AIILKDPNLKFHETRTRDSLRVRADSACFRKLFNDNKQAACRH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038143XLOC_038143Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060655TCONS_00060655Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 643..643
NoneNo IPR availableGENE3D1.10.10.60coord: 567..639
e-value: 1.3E-6
score: 27.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..521
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 578..621
e-value: 2.865E-8
score: 49.8731
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 576..623

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060655-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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